Strain Fitness in Dechlorosoma suillum PS around Dsui_2812

Experiment: L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2810 and Dsui_2811 are separated by 19 nucleotidesDsui_2811 and Dsui_2812 overlap by 4 nucleotidesDsui_2812 and Dsui_2813 are separated by 4 nucleotides Dsui_2810: Dsui_2810 - ABC-type transport system involved in resistance to organic solvents, periplasmic component, at 2,983,855 to 2,984,778 _2810 Dsui_2811: Dsui_2811 - ABC-type transport system involved in resistance to organic solvents, ATPase component, at 2,984,798 to 2,985,571 _2811 Dsui_2812: Dsui_2812 - conserved hypothetical integral membrane protein, at 2,985,568 to 2,986,683 _2812 Dsui_2813: Dsui_2813 - exopolyphosphatase, at 2,986,688 to 2,988,223 _2813 Position (kb) 2985 2986 2987Strain fitness (log2 ratio) -2 -1 0 1 2at 2984.718 kb on - strandat 2984.734 kb on - strandat 2984.737 kb on + strandat 2984.803 kb on - strandat 2984.994 kb on - strand, within Dsui_2811at 2985.106 kb on - strandat 2985.161 kb on - strand, within Dsui_2811at 2985.161 kb on - strand, within Dsui_2811at 2985.281 kb on - strand, within Dsui_2811at 2985.293 kb on - strand, within Dsui_2811at 2985.438 kb on + strandat 2985.609 kb on - strandat 2985.646 kb on - strandat 2985.674 kb on - strandat 2985.685 kb on + strandat 2985.712 kb on + strandat 2985.793 kb on - strand, within Dsui_2812at 2985.812 kb on + strandat 2985.847 kb on - strand, within Dsui_2812at 2985.902 kb on + strandat 2985.927 kb on + strandat 2986.149 kb on - strand, within Dsui_2812at 2986.155 kb on - strand, within Dsui_2812at 2986.160 kb on - strand, within Dsui_2812at 2986.198 kb on - strand, within Dsui_2812at 2986.325 kb on - strand, within Dsui_2812at 2986.500 kb on + strandat 2986.508 kb on - strand, within Dsui_2812at 2986.508 kb on - strandat 2986.518 kb on + strand, within Dsui_2812at 2986.651 kb on + strandat 2986.655 kb on - strandat 2986.659 kb on - strandat 2986.828 kb on + strandat 2986.898 kb on + strand, within Dsui_2813at 2986.958 kb on - strand, within Dsui_2813at 2987.153 kb on + strand, within Dsui_2813at 2987.161 kb on - strand, within Dsui_2813at 2987.161 kb on - strand, within Dsui_2813at 2987.187 kb on + strand, within Dsui_2813at 2987.268 kb on + strand, within Dsui_2813

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lactate (C)
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2,984,718 - +0.9
2,984,734 - -1.1
2,984,737 + +0.9
2,984,803 - +0.9
2,984,994 - Dsui_2811 0.25 -0.7
2,985,106 - +0.9
2,985,161 - Dsui_2811 0.47 +0.9
2,985,161 - Dsui_2811 0.47 -1.9
2,985,281 - Dsui_2811 0.62 +0.9
2,985,293 - Dsui_2811 0.64 -0.1
2,985,438 + +0.9
2,985,609 - -0.7
2,985,646 - -1.1
2,985,674 - -0.7
2,985,685 + +0.9
2,985,712 + +0.9
2,985,793 - Dsui_2812 0.20 -0.7
2,985,812 + +0.9
2,985,847 - Dsui_2812 0.25 +0.9
2,985,902 + -0.1
2,985,927 + -1.1
2,986,149 - Dsui_2812 0.52 +1.9
2,986,155 - Dsui_2812 0.53 +2.5
2,986,160 - Dsui_2812 0.53 +0.9
2,986,198 - Dsui_2812 0.56 -1.4
2,986,325 - Dsui_2812 0.68 -0.1
2,986,500 + -0.1
2,986,508 - Dsui_2812 0.84 +0.3
2,986,508 - -0.1
2,986,518 + Dsui_2812 0.85 -0.1
2,986,651 + -0.1
2,986,655 - -0.4
2,986,659 - -1.1
2,986,828 + +0.9
2,986,898 + Dsui_2813 0.14 +0.9
2,986,958 - Dsui_2813 0.18 +0.5
2,987,153 + Dsui_2813 0.30 -1.1
2,987,161 - Dsui_2813 0.31 +0.6
2,987,161 - Dsui_2813 0.31 -0.8
2,987,187 + Dsui_2813 0.32 -2.3
2,987,268 + Dsui_2813 0.38 -0.1

Or see this region's nucleotide sequence