Strain Fitness in Dechlorosoma suillum PS around Dsui_2504

Experiment: L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2503 and Dsui_2504 are separated by 244 nucleotidesDsui_2504 and Dsui_2505 overlap by 17 nucleotidesDsui_2505 and Dsui_2506 are separated by 93 nucleotides Dsui_2503: Dsui_2503 - Mu transposase/integrase, at 2,650,240 to 2,651,922 _2503 Dsui_2504: Dsui_2504 - hypothetical protein, at 2,652,167 to 2,652,547 _2504 Dsui_2505: Dsui_2505 - putative transcriptional regulator, at 2,652,531 to 2,652,830 _2505 Dsui_2506: Dsui_2506 - transposase, IS30 family, at 2,652,924 to 2,654,084 _2506 Position (kb) 2652 2653Strain fitness (log2 ratio) -2 -1 0 1at 2651.250 kb on + strandat 2651.457 kb on - strand, within Dsui_2503at 2651.474 kb on + strand, within Dsui_2503at 2651.492 kb on - strand, within Dsui_2503at 2651.717 kb on - strand, within Dsui_2503at 2651.761 kb on - strandat 2651.771 kb on - strandat 2651.771 kb on - strandat 2651.816 kb on - strandat 2651.945 kb on + strandat 2651.945 kb on + strandat 2651.965 kb on - strandat 2652.015 kb on + strandat 2652.015 kb on - strandat 2652.041 kb on + strandat 2652.206 kb on + strand, within Dsui_2504at 2652.278 kb on + strand, within Dsui_2504at 2652.314 kb on - strandat 2652.417 kb on + strand, within Dsui_2504at 2652.443 kb on + strand, within Dsui_2504at 2652.462 kb on + strand, within Dsui_2504at 2652.470 kb on - strand, within Dsui_2504at 2652.495 kb on - strandat 2652.495 kb on - strand, within Dsui_2504at 2652.495 kb on - strand, within Dsui_2504at 2652.956 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lactate (C)
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2,651,250 + +0.7
2,651,457 - Dsui_2503 0.72 +0.7
2,651,474 + Dsui_2503 0.73 -1.3
2,651,492 - Dsui_2503 0.74 +0.7
2,651,717 - Dsui_2503 0.88 -0.3
2,651,761 - +0.7
2,651,771 - -1.3
2,651,771 - +0.7
2,651,816 - +0.7
2,651,945 + +0.7
2,651,945 + -2.3
2,651,965 - -0.3
2,652,015 + +0.7
2,652,015 - -0.3
2,652,041 + +0.7
2,652,206 + Dsui_2504 0.10 -0.0
2,652,278 + Dsui_2504 0.29 +0.4
2,652,314 - -0.9
2,652,417 + Dsui_2504 0.66 +0.3
2,652,443 + Dsui_2504 0.72 +0.0
2,652,462 + Dsui_2504 0.77 +0.7
2,652,470 - Dsui_2504 0.80 -0.3
2,652,495 - +0.7
2,652,495 - Dsui_2504 0.86 -0.9
2,652,495 - Dsui_2504 0.86 +0.7
2,652,956 - +0.7

Or see this region's nucleotide sequence