Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2330 and Dsui_2331 are separated by 97 nucleotides Dsui_2331 and Dsui_2332 are separated by 38 nucleotides
Dsui_2330: Dsui_2330 - 3-hydroxyacyl-CoA dehydrogenase, at 2,483,546 to 2,484,394
_2330
Dsui_2331: Dsui_2331 - heat shock protein, at 2,484,492 to 2,485,643
_2331
Dsui_2332: Dsui_2332 - uracil-xanthine permease, at 2,485,682 to 2,486,923
_2332
Position (kb)
2484
2485
2486 Strain fitness (log2 ratio)
-2
-1
0
1 at 2483.559 kb on - strand at 2483.630 kb on - strand at 2483.641 kb on - strand at 2483.691 kb on + strand, within Dsui_2330 at 2483.755 kb on + strand, within Dsui_2330 at 2483.780 kb on + strand, within Dsui_2330 at 2483.788 kb on - strand at 2483.788 kb on - strand, within Dsui_2330 at 2483.986 kb on - strand at 2484.055 kb on + strand at 2484.129 kb on - strand, within Dsui_2330 at 2484.228 kb on + strand, within Dsui_2330 at 2484.376 kb on + strand at 2484.387 kb on - strand at 2484.591 kb on + strand at 2484.599 kb on - strand at 2484.599 kb on - strand at 2484.996 kb on - strand, within Dsui_2331 at 2485.093 kb on + strand at 2485.167 kb on - strand, within Dsui_2331 at 2485.209 kb on + strand, within Dsui_2331 at 2485.243 kb on - strand, within Dsui_2331 at 2485.402 kb on - strand, within Dsui_2331 at 2485.425 kb on - strand, within Dsui_2331 at 2485.728 kb on - strand at 2485.764 kb on - strand at 2485.827 kb on - strand, within Dsui_2332 at 2485.853 kb on + strand, within Dsui_2332 at 2485.883 kb on + strand, within Dsui_2332 at 2485.891 kb on - strand, within Dsui_2332 at 2485.965 kb on - strand, within Dsui_2332 at 2486.116 kb on + strand, within Dsui_2332 at 2486.124 kb on - strand, within Dsui_2332 at 2486.127 kb on + strand at 2486.149 kb on + strand, within Dsui_2332 at 2486.162 kb on + strand at 2486.170 kb on - strand, within Dsui_2332 at 2486.170 kb on - strand, within Dsui_2332 at 2486.171 kb on - strand, within Dsui_2332 at 2486.218 kb on + strand at 2486.368 kb on - strand, within Dsui_2332 at 2486.533 kb on + strand at 2486.533 kb on + strand, within Dsui_2332 at 2486.536 kb on - strand, within Dsui_2332 at 2486.537 kb on - strand, within Dsui_2332 at 2486.541 kb on - strand, within Dsui_2332 at 2486.541 kb on - strand, within Dsui_2332 at 2486.554 kb on - strand, within Dsui_2332
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 2,483,559 - +0.8 2,483,630 - +0.8 2,483,641 - +0.8 2,483,691 + Dsui_2330 0.17 +0.8 2,483,755 + Dsui_2330 0.25 -1.5 2,483,780 + Dsui_2330 0.28 -1.5 2,483,788 - +0.8 2,483,788 - Dsui_2330 0.29 -1.2 2,483,986 - +0.8 2,484,055 + -0.2 2,484,129 - Dsui_2330 0.69 -1.8 2,484,228 + Dsui_2330 0.80 -1.5 2,484,376 + -0.2 2,484,387 - +0.8 2,484,591 + -1.8 2,484,599 - -1.8 2,484,599 - +0.2 2,484,996 - Dsui_2331 0.44 +0.8 2,485,093 + -1.2 2,485,167 - Dsui_2331 0.59 +0.6 2,485,209 + Dsui_2331 0.62 +0.8 2,485,243 - Dsui_2331 0.65 +0.3 2,485,402 - Dsui_2331 0.79 +0.6 2,485,425 - Dsui_2331 0.81 +1.2 2,485,728 - -0.3 2,485,764 - -0.5 2,485,827 - Dsui_2332 0.12 +0.0 2,485,853 + Dsui_2332 0.14 -1.2 2,485,883 + Dsui_2332 0.16 -1.5 2,485,891 - Dsui_2332 0.17 +0.1 2,485,965 - Dsui_2332 0.23 +0.6 2,486,116 + Dsui_2332 0.35 -0.2 2,486,124 - Dsui_2332 0.36 -1.4 2,486,127 + -0.2 2,486,149 + Dsui_2332 0.38 -1.2 2,486,162 + +0.8 2,486,170 - Dsui_2332 0.39 +1.0 2,486,170 - Dsui_2332 0.39 -1.7 2,486,171 - Dsui_2332 0.39 +1.5 2,486,218 + +0.8 2,486,368 - Dsui_2332 0.55 -0.6 2,486,533 + -0.2 2,486,533 + Dsui_2332 0.69 -2.4 2,486,536 - Dsui_2332 0.69 -1.1 2,486,537 - Dsui_2332 0.69 +0.3 2,486,541 - Dsui_2332 0.69 +0.5 2,486,541 - Dsui_2332 0.69 -0.4 2,486,554 - Dsui_2332 0.70 -0.5
Or see this region's nucleotide sequence