Strain Fitness in Dechlorosoma suillum PS around Dsui_2127

Experiment: L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2126 and Dsui_2127 are separated by 67 nucleotidesDsui_2127 and Dsui_2128 are separated by 143 nucleotides Dsui_2126: Dsui_2126 - alanine dehydrogenase, at 2,254,483 to 2,255,574 _2126 Dsui_2127: Dsui_2127 - flavodoxin reductase family protein, at 2,255,642 to 2,256,430 _2127 Dsui_2128: Dsui_2128 - uncharacterized protein involved in outer membrane biogenesis, at 2,256,574 to 2,259,795 _2128 Position (kb) 2255 2256 2257Strain fitness (log2 ratio) -2 -1 0 1at 2254.675 kb on - strand, within Dsui_2126at 2254.770 kb on - strand, within Dsui_2126at 2255.248 kb on - strand, within Dsui_2126at 2255.255 kb on + strandat 2255.517 kb on + strandat 2255.847 kb on - strandat 2255.990 kb on - strandat 2256.090 kb on - strand, within Dsui_2127at 2256.123 kb on - strandat 2256.128 kb on - strandat 2256.128 kb on - strand, within Dsui_2127at 2256.172 kb on + strand, within Dsui_2127at 2256.440 kb on + strandat 2256.440 kb on + strandat 2256.448 kb on - strandat 2256.448 kb on - strandat 2256.491 kb on + strandat 2256.499 kb on - strandat 2256.571 kb on + strandat 2256.626 kb on - strandat 2256.651 kb on + strandat 2256.745 kb on + strandat 2256.762 kb on + strandat 2256.770 kb on - strandat 2256.827 kb on - strandat 2256.910 kb on + strand, within Dsui_2128at 2256.986 kb on + strand, within Dsui_2128at 2257.181 kb on - strand, within Dsui_2128at 2257.276 kb on + strand, within Dsui_2128at 2257.304 kb on + strand, within Dsui_2128at 2257.322 kb on - strand, within Dsui_2128

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lactate (C)
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2,254,675 - Dsui_2126 0.18 -0.0
2,254,770 - Dsui_2126 0.26 -1.0
2,255,248 - Dsui_2126 0.70 -0.2
2,255,255 + +1.0
2,255,517 + -1.6
2,255,847 - -0.0
2,255,990 - +1.0
2,256,090 - Dsui_2127 0.57 -0.6
2,256,123 - +1.0
2,256,128 - +1.0
2,256,128 - Dsui_2127 0.62 -2.2
2,256,172 + Dsui_2127 0.67 -0.0
2,256,440 + -0.6
2,256,440 + +1.0
2,256,448 - -1.0
2,256,448 - -0.6
2,256,491 + -1.0
2,256,499 - -0.0
2,256,571 + +1.0
2,256,626 - -1.0
2,256,651 + +1.0
2,256,745 + -1.0
2,256,762 + -1.2
2,256,770 - -1.0
2,256,827 - +1.0
2,256,910 + Dsui_2128 0.10 +1.0
2,256,986 + Dsui_2128 0.13 -2.2
2,257,181 - Dsui_2128 0.19 -0.0
2,257,276 + Dsui_2128 0.22 -0.0
2,257,304 + Dsui_2128 0.23 -0.6
2,257,322 - Dsui_2128 0.23 -2.0

Or see this region's nucleotide sequence