Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2070 and Dsui_2071 are separated by 164 nucleotides Dsui_2071 and Dsui_2072 are separated by 134 nucleotides Dsui_2072 and Dsui_2073 are separated by 153 nucleotides Dsui_2073 and Dsui_2074 are separated by 218 nucleotides
Dsui_2070: Dsui_2070 - transcriptional regulator, at 2,188,941 to 2,189,882
_2070
Dsui_2071: Dsui_2071 - acyl carrier protein phosphodiesterase, at 2,190,047 to 2,190,646
_2071
Dsui_2072: Dsui_2072 - Pirin-related protein, at 2,190,781 to 2,191,698
_2072
Dsui_2073: Dsui_2073 - Uncharacterized protein conserved in bacteria (DUF2242), at 2,191,852 to 2,192,358
_2073
Dsui_2074: Dsui_2074 - phasin family protein, at 2,192,577 to 2,192,972
_2074
Position (kb)
2190
2191
2192 Strain fitness (log2 ratio)
-2
-1
0
1 at 2189.793 kb on + strand at 2189.847 kb on - strand at 2189.857 kb on - strand at 2190.000 kb on + strand at 2190.015 kb on + strand at 2190.023 kb on + strand at 2190.217 kb on - strand at 2190.243 kb on + strand, within Dsui_2071 at 2190.243 kb on + strand at 2190.251 kb on - strand, within Dsui_2071 at 2190.288 kb on + strand at 2190.314 kb on + strand, within Dsui_2071 at 2190.495 kb on + strand at 2190.620 kb on + strand at 2190.787 kb on + strand at 2191.082 kb on - strand at 2191.369 kb on - strand, within Dsui_2072 at 2191.434 kb on + strand at 2191.454 kb on + strand at 2191.454 kb on + strand, within Dsui_2072 at 2191.454 kb on + strand, within Dsui_2072 at 2191.454 kb on + strand, within Dsui_2072 at 2191.462 kb on - strand at 2191.496 kb on - strand, within Dsui_2072 at 2191.552 kb on + strand, within Dsui_2072 at 2191.575 kb on + strand, within Dsui_2072 at 2191.599 kb on + strand, within Dsui_2072 at 2191.619 kb on + strand at 2191.780 kb on + strand at 2192.118 kb on + strand at 2192.212 kb on + strand at 2192.439 kb on + strand at 2192.525 kb on + strand at 2192.651 kb on + strand at 2192.676 kb on + strand, within Dsui_2074
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 2,189,793 + +0.1 2,189,847 - +0.0 2,189,857 - -0.6 2,190,000 + +0.1 2,190,015 + +1.1 2,190,023 + +0.1 2,190,217 - +1.1 2,190,243 + Dsui_2071 0.33 +0.1 2,190,243 + +1.1 2,190,251 - Dsui_2071 0.34 -0.9 2,190,288 + +1.1 2,190,314 + Dsui_2071 0.45 -1.7 2,190,495 + +1.1 2,190,620 + +0.1 2,190,787 + +0.1 2,191,082 - +0.1 2,191,369 - Dsui_2072 0.64 -1.3 2,191,434 + +1.1 2,191,454 + +1.1 2,191,454 + Dsui_2072 0.73 -1.5 2,191,454 + Dsui_2072 0.73 +0.1 2,191,454 + Dsui_2072 0.73 -2.1 2,191,462 - -0.5 2,191,496 - Dsui_2072 0.78 +0.1 2,191,552 + Dsui_2072 0.84 -0.5 2,191,575 + Dsui_2072 0.86 -0.5 2,191,599 + Dsui_2072 0.89 +0.1 2,191,619 + +0.1 2,191,780 + -0.9 2,192,118 + +1.1 2,192,212 + +1.1 2,192,439 + +1.1 2,192,525 + +0.1 2,192,651 + +1.1 2,192,676 + Dsui_2074 0.25 -2.1
Or see this region's nucleotide sequence