Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2047 and Dsui_2048 are separated by 64 nucleotides Dsui_2048 and Dsui_2049 are separated by 93 nucleotides
Dsui_2047: Dsui_2047 - chromate transporter, chromate ion transporter family, at 2,167,017 to 2,168,399
_2047
Dsui_2048: Dsui_2048 - ATPase component of ABC transporters with duplicated ATPase domain, at 2,168,464 to 2,170,146
_2048
Dsui_2049: Dsui_2049 - ABC-type uncharacterized transport system, permease and ATPase component, at 2,170,240 to 2,171,943
_2049
Position (kb)
2168
2169
2170
2171 Strain fitness (log2 ratio)
-1
0
1 at 2167.471 kb on + strand, within Dsui_2047 at 2167.471 kb on + strand at 2167.479 kb on - strand at 2167.570 kb on + strand, within Dsui_2047 at 2167.736 kb on + strand, within Dsui_2047 at 2167.859 kb on + strand at 2167.861 kb on + strand, within Dsui_2047 at 2167.882 kb on - strand at 2167.970 kb on - strand at 2168.079 kb on + strand, within Dsui_2047 at 2168.079 kb on + strand at 2168.125 kb on - strand at 2168.190 kb on - strand at 2168.199 kb on - strand, within Dsui_2047 at 2168.211 kb on - strand at 2168.302 kb on + strand at 2168.396 kb on + strand at 2168.667 kb on + strand, within Dsui_2048 at 2168.672 kb on + strand, within Dsui_2048 at 2168.741 kb on - strand, within Dsui_2048 at 2168.763 kb on + strand, within Dsui_2048 at 2168.771 kb on - strand, within Dsui_2048 at 2168.990 kb on - strand, within Dsui_2048 at 2168.996 kb on + strand, within Dsui_2048 at 2169.047 kb on + strand, within Dsui_2048 at 2169.057 kb on + strand, within Dsui_2048 at 2169.067 kb on + strand, within Dsui_2048 at 2169.070 kb on - strand, within Dsui_2048 at 2169.215 kb on + strand, within Dsui_2048 at 2169.226 kb on + strand at 2169.273 kb on - strand, within Dsui_2048 at 2169.302 kb on + strand, within Dsui_2048 at 2169.302 kb on + strand, within Dsui_2048 at 2169.352 kb on - strand, within Dsui_2048 at 2169.364 kb on + strand, within Dsui_2048 at 2169.370 kb on - strand, within Dsui_2048 at 2169.372 kb on - strand, within Dsui_2048 at 2169.439 kb on - strand, within Dsui_2048 at 2169.476 kb on + strand, within Dsui_2048 at 2169.592 kb on - strand, within Dsui_2048 at 2169.816 kb on - strand, within Dsui_2048 at 2170.001 kb on + strand at 2170.131 kb on + strand at 2170.339 kb on - strand at 2170.375 kb on - strand at 2170.397 kb on - strand at 2170.453 kb on + strand, within Dsui_2049 at 2170.483 kb on - strand at 2170.616 kb on + strand at 2170.617 kb on + strand, within Dsui_2049 at 2170.617 kb on + strand, within Dsui_2049 at 2170.666 kb on - strand, within Dsui_2049 at 2170.685 kb on - strand, within Dsui_2049 at 2170.863 kb on + strand, within Dsui_2049 at 2170.996 kb on + strand at 2171.004 kb on - strand, within Dsui_2049 at 2171.128 kb on - strand, within Dsui_2049 at 2171.130 kb on + strand, within Dsui_2049 at 2171.130 kb on + strand, within Dsui_2049 at 2171.138 kb on - strand, within Dsui_2049 at 2171.138 kb on - strand, within Dsui_2049 at 2171.138 kb on - strand, within Dsui_2049
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 2,167,471 + Dsui_2047 0.33 +1.1 2,167,471 + +0.1 2,167,479 - -0.9 2,167,570 + Dsui_2047 0.40 +1.1 2,167,736 + Dsui_2047 0.52 +1.1 2,167,859 + +0.1 2,167,861 + Dsui_2047 0.61 -0.9 2,167,882 - +0.1 2,167,970 - +1.1 2,168,079 + Dsui_2047 0.77 +0.1 2,168,079 + +1.1 2,168,125 - +0.1 2,168,190 - +1.1 2,168,199 - Dsui_2047 0.85 -1.5 2,168,211 - +1.1 2,168,302 + +0.1 2,168,396 + +1.1 2,168,667 + Dsui_2048 0.12 -0.5 2,168,672 + Dsui_2048 0.12 -1.5 2,168,741 - Dsui_2048 0.16 +0.0 2,168,763 + Dsui_2048 0.18 +0.1 2,168,771 - Dsui_2048 0.18 -0.0 2,168,990 - Dsui_2048 0.31 +0.7 2,168,996 + Dsui_2048 0.32 +1.1 2,169,047 + Dsui_2048 0.35 +0.1 2,169,057 + Dsui_2048 0.35 +1.1 2,169,067 + Dsui_2048 0.36 +1.1 2,169,070 - Dsui_2048 0.36 +1.1 2,169,215 + Dsui_2048 0.45 -0.5 2,169,226 + +1.1 2,169,273 - Dsui_2048 0.48 -0.1 2,169,302 + Dsui_2048 0.50 -1.7 2,169,302 + Dsui_2048 0.50 +1.1 2,169,352 - Dsui_2048 0.53 +0.8 2,169,364 + Dsui_2048 0.53 +1.1 2,169,370 - Dsui_2048 0.54 -0.1 2,169,372 - Dsui_2048 0.54 +0.2 2,169,439 - Dsui_2048 0.58 +0.7 2,169,476 + Dsui_2048 0.60 +1.1 2,169,592 - Dsui_2048 0.67 -0.0 2,169,816 - Dsui_2048 0.80 -0.1 2,170,001 + +0.1 2,170,131 + -0.5 2,170,339 - +1.1 2,170,375 - +1.1 2,170,397 - +1.1 2,170,453 + Dsui_2049 0.12 +0.1 2,170,483 - +1.1 2,170,616 + +1.1 2,170,617 + Dsui_2049 0.22 -0.5 2,170,617 + Dsui_2049 0.22 +0.1 2,170,666 - Dsui_2049 0.25 -0.5 2,170,685 - Dsui_2049 0.26 -1.5 2,170,863 + Dsui_2049 0.37 +0.1 2,170,996 + +1.1 2,171,004 - Dsui_2049 0.45 +0.4 2,171,128 - Dsui_2049 0.52 -1.3 2,171,130 + Dsui_2049 0.52 -0.9 2,171,130 + Dsui_2049 0.52 -1.5 2,171,138 - Dsui_2049 0.53 -0.9 2,171,138 - Dsui_2049 0.53 +1.1 2,171,138 - Dsui_2049 0.53 -0.5
Or see this region's nucleotide sequence