Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1741 and Dsui_1742 are separated by 30 nucleotides Dsui_1742 and Dsui_1743 overlap by 1 nucleotides Dsui_1743 and Dsui_1744 are separated by 13 nucleotides
Dsui_1741: Dsui_1741 - flagellar hook-associated protein FlgK, at 1,829,404 to 1,831,581
_1741
Dsui_1742: Dsui_1742 - flagellar hook-associated protein 3, at 1,831,612 to 1,832,580
_1742
Dsui_1743: Dsui_1743 - hypothetical protein, at 1,832,580 to 1,833,044
_1743
Dsui_1744: Dsui_1744 - flagellar biosynthetic protein FliR, at 1,833,058 to 1,833,843
_1744
Position (kb)
1831
1832
1833 Strain fitness (log2 ratio)
-2
-1
0
1 at 1830.612 kb on + strand, within Dsui_1741 at 1830.620 kb on - strand, within Dsui_1741 at 1830.634 kb on + strand, within Dsui_1741 at 1830.696 kb on - strand, within Dsui_1741 at 1830.709 kb on + strand, within Dsui_1741 at 1830.709 kb on + strand, within Dsui_1741 at 1830.710 kb on + strand, within Dsui_1741 at 1830.716 kb on - strand, within Dsui_1741 at 1831.074 kb on + strand, within Dsui_1741 at 1831.093 kb on + strand, within Dsui_1741 at 1831.104 kb on + strand at 1831.106 kb on + strand, within Dsui_1741 at 1831.106 kb on + strand, within Dsui_1741 at 1831.117 kb on - strand, within Dsui_1741 at 1831.150 kb on + strand, within Dsui_1741 at 1831.153 kb on - strand, within Dsui_1741 at 1831.164 kb on + strand, within Dsui_1741 at 1831.173 kb on - strand at 1831.181 kb on + strand, within Dsui_1741 at 1831.349 kb on - strand, within Dsui_1741 at 1831.349 kb on - strand, within Dsui_1741 at 1831.362 kb on - strand, within Dsui_1741 at 1831.480 kb on + strand at 1831.491 kb on + strand at 1831.491 kb on + strand at 1831.497 kb on - strand at 1831.501 kb on + strand at 1831.517 kb on - strand at 1831.540 kb on + strand at 1831.541 kb on + strand at 1831.541 kb on + strand at 1831.549 kb on - strand at 1831.549 kb on - strand at 1831.559 kb on - strand at 1831.561 kb on + strand at 1831.606 kb on + strand at 1831.606 kb on + strand at 1831.614 kb on - strand at 1831.632 kb on + strand at 1831.640 kb on - strand at 1831.675 kb on + strand at 1831.680 kb on + strand at 1831.688 kb on + strand at 1831.688 kb on - strand at 1831.696 kb on - strand at 1831.724 kb on + strand, within Dsui_1742 at 1831.811 kb on - strand, within Dsui_1742 at 1831.823 kb on - strand, within Dsui_1742 at 1831.823 kb on - strand, within Dsui_1742 at 1831.837 kb on + strand, within Dsui_1742 at 1831.867 kb on - strand, within Dsui_1742 at 1831.892 kb on - strand, within Dsui_1742 at 1831.971 kb on + strand, within Dsui_1742 at 1832.006 kb on + strand, within Dsui_1742 at 1832.006 kb on + strand, within Dsui_1742 at 1832.034 kb on - strand, within Dsui_1742 at 1832.067 kb on - strand, within Dsui_1742 at 1832.071 kb on + strand, within Dsui_1742 at 1832.123 kb on - strand, within Dsui_1742 at 1832.123 kb on - strand, within Dsui_1742 at 1832.213 kb on + strand, within Dsui_1742 at 1832.213 kb on + strand, within Dsui_1742 at 1832.213 kb on + strand, within Dsui_1742 at 1832.213 kb on + strand, within Dsui_1742 at 1832.213 kb on + strand, within Dsui_1742 at 1832.213 kb on + strand, within Dsui_1742 at 1832.218 kb on + strand, within Dsui_1742 at 1832.307 kb on - strand, within Dsui_1742 at 1832.311 kb on + strand, within Dsui_1742 at 1832.319 kb on - strand, within Dsui_1742 at 1832.344 kb on + strand, within Dsui_1742 at 1832.437 kb on + strand, within Dsui_1742 at 1832.472 kb on + strand, within Dsui_1742 at 1832.488 kb on - strand at 1832.517 kb on + strand at 1832.517 kb on + strand at 1832.517 kb on + strand at 1832.517 kb on + strand at 1832.525 kb on - strand at 1832.525 kb on - strand at 1832.525 kb on - strand at 1832.549 kb on + strand at 1832.555 kb on + strand at 1832.555 kb on + strand at 1832.563 kb on - strand at 1832.563 kb on - strand at 1832.599 kb on - strand at 1832.602 kb on - strand at 1832.664 kb on - strand, within Dsui_1743 at 1832.675 kb on - strand, within Dsui_1743 at 1832.679 kb on + strand, within Dsui_1743 at 1832.682 kb on - strand, within Dsui_1743 at 1832.687 kb on - strand, within Dsui_1743 at 1832.813 kb on + strand, within Dsui_1743 at 1832.821 kb on - strand, within Dsui_1743 at 1832.875 kb on - strand, within Dsui_1743 at 1832.916 kb on - strand, within Dsui_1743 at 1833.007 kb on + strand at 1833.062 kb on + strand at 1833.083 kb on - strand at 1833.088 kb on - strand at 1833.134 kb on + strand at 1833.134 kb on + strand at 1833.134 kb on + strand at 1833.139 kb on + strand, within Dsui_1744 at 1833.142 kb on - strand, within Dsui_1744 at 1833.158 kb on - strand, within Dsui_1744 at 1833.165 kb on + strand, within Dsui_1744 at 1833.165 kb on + strand, within Dsui_1744 at 1833.173 kb on - strand, within Dsui_1744 at 1833.240 kb on + strand, within Dsui_1744 at 1833.285 kb on + strand, within Dsui_1744 at 1833.296 kb on + strand, within Dsui_1744 at 1833.306 kb on + strand, within Dsui_1744 at 1833.325 kb on - strand, within Dsui_1744 at 1833.339 kb on + strand at 1833.347 kb on - strand, within Dsui_1744 at 1833.383 kb on + strand, within Dsui_1744 at 1833.391 kb on - strand, within Dsui_1744 at 1833.444 kb on + strand, within Dsui_1744 at 1833.452 kb on - strand, within Dsui_1744
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 1,830,612 + Dsui_1741 0.55 -2.1 1,830,620 - Dsui_1741 0.56 -1.2 1,830,634 + Dsui_1741 0.56 +0.7 1,830,696 - Dsui_1741 0.59 -0.7 1,830,709 + Dsui_1741 0.60 -2.7 1,830,709 + Dsui_1741 0.60 -1.3 1,830,710 + Dsui_1741 0.60 -0.9 1,830,716 - Dsui_1741 0.60 -0.3 1,831,074 + Dsui_1741 0.77 +0.7 1,831,093 + Dsui_1741 0.78 -1.3 1,831,104 + +0.7 1,831,106 + Dsui_1741 0.78 -1.3 1,831,106 + Dsui_1741 0.78 -0.9 1,831,117 - Dsui_1741 0.79 -0.3 1,831,150 + Dsui_1741 0.80 -1.3 1,831,153 - Dsui_1741 0.80 -0.3 1,831,164 + Dsui_1741 0.81 -0.9 1,831,173 - +0.7 1,831,181 + Dsui_1741 0.82 +0.7 1,831,349 - Dsui_1741 0.89 -1.3 1,831,349 - Dsui_1741 0.89 -0.3 1,831,362 - Dsui_1741 0.90 -0.3 1,831,480 + +0.7 1,831,491 + -1.6 1,831,491 + +0.7 1,831,497 - -0.8 1,831,501 + +0.7 1,831,517 - -1.3 1,831,540 + +0.7 1,831,541 + -1.3 1,831,541 + -0.3 1,831,549 - +0.7 1,831,549 - -0.3 1,831,559 - -0.8 1,831,561 + -2.3 1,831,606 + -0.3 1,831,606 + -2.1 1,831,614 - +0.7 1,831,632 + +0.7 1,831,640 - -2.3 1,831,675 + +0.7 1,831,680 + -2.4 1,831,688 + -0.8 1,831,688 - +0.7 1,831,696 - -0.3 1,831,724 + Dsui_1742 0.12 -0.3 1,831,811 - Dsui_1742 0.21 -1.6 1,831,823 - Dsui_1742 0.22 -1.3 1,831,823 - Dsui_1742 0.22 +0.7 1,831,837 + Dsui_1742 0.23 -1.8 1,831,867 - Dsui_1742 0.26 -0.8 1,831,892 - Dsui_1742 0.29 -1.8 1,831,971 + Dsui_1742 0.37 +0.7 1,832,006 + Dsui_1742 0.41 +0.7 1,832,006 + Dsui_1742 0.41 -2.6 1,832,034 - Dsui_1742 0.44 +0.7 1,832,067 - Dsui_1742 0.47 -0.8 1,832,071 + Dsui_1742 0.47 +0.7 1,832,123 - Dsui_1742 0.53 -0.8 1,832,123 - Dsui_1742 0.53 -0.8 1,832,213 + Dsui_1742 0.62 +0.7 1,832,213 + Dsui_1742 0.62 -0.3 1,832,213 + Dsui_1742 0.62 +0.7 1,832,213 + Dsui_1742 0.62 -0.3 1,832,213 + Dsui_1742 0.62 -0.8 1,832,213 + Dsui_1742 0.62 +0.7 1,832,218 + Dsui_1742 0.63 -0.8 1,832,307 - Dsui_1742 0.72 +0.7 1,832,311 + Dsui_1742 0.72 -2.6 1,832,319 - Dsui_1742 0.73 -2.1 1,832,344 + Dsui_1742 0.76 +1.7 1,832,437 + Dsui_1742 0.85 -1.3 1,832,472 + Dsui_1742 0.89 +0.0 1,832,488 - +0.7 1,832,517 + -2.3 1,832,517 + -0.8 1,832,517 + -0.8 1,832,517 + -0.8 1,832,525 - +0.7 1,832,525 - -0.3 1,832,525 - -1.7 1,832,549 + -0.0 1,832,555 + -2.3 1,832,555 + -0.7 1,832,563 - -0.3 1,832,563 - -1.6 1,832,599 - -0.3 1,832,602 - +0.7 1,832,664 - Dsui_1743 0.18 +0.2 1,832,675 - Dsui_1743 0.20 +0.7 1,832,679 + Dsui_1743 0.21 -1.3 1,832,682 - Dsui_1743 0.22 -0.8 1,832,687 - Dsui_1743 0.23 -0.3 1,832,813 + Dsui_1743 0.50 +0.7 1,832,821 - Dsui_1743 0.52 +0.7 1,832,875 - Dsui_1743 0.63 -2.4 1,832,916 - Dsui_1743 0.72 -0.3 1,833,007 + -2.1 1,833,062 + +0.7 1,833,083 - -0.3 1,833,088 - -0.3 1,833,134 + -0.3 1,833,134 + +0.7 1,833,134 + +0.7 1,833,139 + Dsui_1744 0.10 +0.7 1,833,142 - Dsui_1744 0.11 +0.4 1,833,158 - Dsui_1744 0.13 -0.3 1,833,165 + Dsui_1744 0.14 +0.7 1,833,165 + Dsui_1744 0.14 +0.7 1,833,173 - Dsui_1744 0.15 -0.2 1,833,240 + Dsui_1744 0.23 -1.3 1,833,285 + Dsui_1744 0.29 -0.8 1,833,296 + Dsui_1744 0.30 -0.8 1,833,306 + Dsui_1744 0.32 -2.1 1,833,325 - Dsui_1744 0.34 -0.8 1,833,339 + +0.7 1,833,347 - Dsui_1744 0.37 -0.1 1,833,383 + Dsui_1744 0.41 -0.3 1,833,391 - Dsui_1744 0.42 -0.7 1,833,444 + Dsui_1744 0.49 -0.8 1,833,452 - Dsui_1744 0.50 -0.2
Or see this region's nucleotide sequence