Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1450 and Dsui_1451 are separated by 22 nucleotides Dsui_1451 and Dsui_1452 are separated by 43 nucleotides Dsui_1452 and Dsui_1453 are separated by 13 nucleotides Dsui_1453 and Dsui_1454 are separated by 7 nucleotides
Dsui_1450: Dsui_1450 - serine/threonine protein phosphatase, at 1,507,015 to 1,507,842
_1450
Dsui_1451: Dsui_1451 - FHA domain-containing protein, at 1,507,865 to 1,508,593
_1451
Dsui_1452: Dsui_1452 - putative transmembrane sensor domain protein, at 1,508,637 to 1,510,850
_1452
Dsui_1453: Dsui_1453 - metal-dependent hydrolase, beta-lactamase superfamily III, at 1,510,864 to 1,511,637
_1453
Dsui_1454: Dsui_1454 - Rhodanese-like protein,cyclic nucleotide-binding protein, at 1,511,645 to 1,512,727
_1454
Position (kb)
1508
1509
1510
1511 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1507.855 kb on + strand at 1507.863 kb on - strand at 1507.969 kb on - strand, within Dsui_1451 at 1508.005 kb on + strand, within Dsui_1451 at 1508.036 kb on + strand, within Dsui_1451 at 1508.036 kb on + strand, within Dsui_1451 at 1508.041 kb on + strand, within Dsui_1451 at 1508.058 kb on - strand at 1508.410 kb on - strand, within Dsui_1451 at 1508.587 kb on + strand at 1508.682 kb on - strand at 1508.689 kb on + strand at 1508.697 kb on - strand at 1509.164 kb on - strand, within Dsui_1452 at 1509.493 kb on + strand, within Dsui_1452 at 1509.706 kb on - strand, within Dsui_1452 at 1509.758 kb on - strand, within Dsui_1452 at 1509.837 kb on - strand, within Dsui_1452 at 1509.853 kb on + strand, within Dsui_1452 at 1509.860 kb on - strand at 1509.862 kb on - strand, within Dsui_1452 at 1509.892 kb on - strand at 1510.062 kb on - strand, within Dsui_1452 at 1510.077 kb on - strand, within Dsui_1452 at 1510.197 kb on + strand, within Dsui_1452 at 1510.215 kb on - strand, within Dsui_1452 at 1510.232 kb on + strand, within Dsui_1452 at 1510.251 kb on - strand at 1510.314 kb on + strand, within Dsui_1452 at 1510.344 kb on + strand, within Dsui_1452 at 1510.430 kb on + strand, within Dsui_1452 at 1510.430 kb on + strand at 1510.487 kb on - strand, within Dsui_1452 at 1510.566 kb on - strand, within Dsui_1452 at 1510.580 kb on + strand, within Dsui_1452 at 1510.619 kb on - strand at 1510.642 kb on - strand at 1510.642 kb on - strand at 1510.682 kb on - strand at 1510.922 kb on + strand at 1510.922 kb on + strand at 1510.930 kb on - strand at 1510.930 kb on - strand at 1510.930 kb on - strand at 1511.021 kb on + strand, within Dsui_1453 at 1511.104 kb on + strand, within Dsui_1453 at 1511.190 kb on - strand at 1511.237 kb on + strand, within Dsui_1453 at 1511.237 kb on + strand, within Dsui_1453 at 1511.281 kb on + strand, within Dsui_1453 at 1511.380 kb on - strand, within Dsui_1453 at 1511.442 kb on + strand, within Dsui_1453 at 1511.474 kb on - strand, within Dsui_1453 at 1511.535 kb on + strand, within Dsui_1453 at 1511.630 kb on - strand at 1511.666 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 1,507,855 + -1.5 1,507,863 - +0.7 1,507,969 - Dsui_1451 0.14 -1.3 1,508,005 + Dsui_1451 0.19 -0.7 1,508,036 + Dsui_1451 0.23 -0.1 1,508,036 + Dsui_1451 0.23 -1.7 1,508,041 + Dsui_1451 0.24 +2.2 1,508,058 - -0.3 1,508,410 - Dsui_1451 0.75 -0.3 1,508,587 + -0.3 1,508,682 - -0.9 1,508,689 + -0.9 1,508,697 - -0.9 1,509,164 - Dsui_1452 0.24 +0.7 1,509,493 + Dsui_1452 0.39 -0.3 1,509,706 - Dsui_1452 0.48 +0.7 1,509,758 - Dsui_1452 0.51 -0.9 1,509,837 - Dsui_1452 0.54 -0.3 1,509,853 + Dsui_1452 0.55 -2.1 1,509,860 - -0.3 1,509,862 - Dsui_1452 0.55 +0.7 1,509,892 - -0.3 1,510,062 - Dsui_1452 0.64 -0.9 1,510,077 - Dsui_1452 0.65 +0.7 1,510,197 + Dsui_1452 0.70 +0.7 1,510,215 - Dsui_1452 0.71 +0.7 1,510,232 + Dsui_1452 0.72 +0.1 1,510,251 - +0.7 1,510,314 + Dsui_1452 0.76 +0.6 1,510,344 + Dsui_1452 0.77 +0.9 1,510,430 + Dsui_1452 0.81 +0.7 1,510,430 + +0.7 1,510,487 - Dsui_1452 0.84 -2.9 1,510,566 - Dsui_1452 0.87 +0.7 1,510,580 + Dsui_1452 0.88 +0.1 1,510,619 - +0.7 1,510,642 - -2.3 1,510,642 - -0.3 1,510,682 - +0.7 1,510,922 + -0.1 1,510,922 + +0.7 1,510,930 - -1.7 1,510,930 - +0.7 1,510,930 - +0.7 1,511,021 + Dsui_1453 0.20 +0.7 1,511,104 + Dsui_1453 0.31 +0.7 1,511,190 - +0.7 1,511,237 + Dsui_1453 0.48 -0.1 1,511,237 + Dsui_1453 0.48 +0.7 1,511,281 + Dsui_1453 0.54 -0.6 1,511,380 - Dsui_1453 0.67 -0.9 1,511,442 + Dsui_1453 0.75 +0.2 1,511,474 - Dsui_1453 0.79 -0.3 1,511,535 + Dsui_1453 0.87 -0.6 1,511,630 - +0.7 1,511,666 + -1.7
Or see this region's nucleotide sequence