Strain Fitness in Dechlorosoma suillum PS around Dsui_1384

Experiment: L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1383 and Dsui_1384 are separated by 45 nucleotidesDsui_1384 and Dsui_1385 are separated by 168 nucleotides Dsui_1383: Dsui_1383 - transporter, monovalent cation:proton antiporter-2 (CPA2) family, at 1,438,149 to 1,440,116 _1383 Dsui_1384: Dsui_1384 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 1,440,162 to 1,440,839 _1384 Dsui_1385: Dsui_1385 - hypothetical protein, at 1,441,008 to 1,442,711 _1385 Position (kb) 1440 1441Strain fitness (log2 ratio) -2 -1 0 1at 1439.190 kb on - strandat 1439.226 kb on + strand, within Dsui_1383at 1439.364 kb on - strandat 1439.445 kb on + strand, within Dsui_1383at 1439.453 kb on - strand, within Dsui_1383at 1439.476 kb on - strand, within Dsui_1383at 1439.509 kb on - strand, within Dsui_1383at 1439.604 kb on + strand, within Dsui_1383at 1439.656 kb on + strand, within Dsui_1383at 1439.676 kb on + strand, within Dsui_1383at 1439.688 kb on - strand, within Dsui_1383at 1439.734 kb on - strand, within Dsui_1383at 1439.780 kb on - strandat 1439.949 kb on - strandat 1439.949 kb on - strandat 1439.978 kb on + strandat 1440.088 kb on + strandat 1440.104 kb on + strandat 1440.112 kb on - strandat 1440.189 kb on - strandat 1440.549 kb on - strand, within Dsui_1384at 1440.580 kb on - strand, within Dsui_1384at 1440.697 kb on + strand, within Dsui_1384at 1440.697 kb on + strand, within Dsui_1384at 1440.697 kb on + strand, within Dsui_1384at 1440.705 kb on - strand, within Dsui_1384at 1440.705 kb on - strand, within Dsui_1384at 1440.813 kb on + strandat 1440.887 kb on + strandat 1440.926 kb on - strandat 1441.024 kb on + strandat 1441.106 kb on - strandat 1441.111 kb on - strandat 1441.213 kb on - strand, within Dsui_1385at 1441.286 kb on + strand, within Dsui_1385at 1441.597 kb on + strand, within Dsui_1385at 1441.638 kb on - strand, within Dsui_1385at 1441.704 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lactate (C)
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1,439,190 - +0.6
1,439,226 + Dsui_1383 0.55 -0.5
1,439,364 - +0.6
1,439,445 + Dsui_1383 0.66 -0.1
1,439,453 - Dsui_1383 0.66 -2.7
1,439,476 - Dsui_1383 0.67 -1.0
1,439,509 - Dsui_1383 0.69 +0.6
1,439,604 + Dsui_1383 0.74 -0.2
1,439,656 + Dsui_1383 0.77 -0.3
1,439,676 + Dsui_1383 0.78 -0.0
1,439,688 - Dsui_1383 0.78 +0.6
1,439,734 - Dsui_1383 0.81 +0.6
1,439,780 - +0.6
1,439,949 - -0.4
1,439,949 - -1.0
1,439,978 + -0.3
1,440,088 + -0.4
1,440,104 + +0.0
1,440,112 - -0.4
1,440,189 - -0.2
1,440,549 - Dsui_1384 0.57 -0.8
1,440,580 - Dsui_1384 0.62 -1.3
1,440,697 + Dsui_1384 0.79 -0.4
1,440,697 + Dsui_1384 0.79 +0.6
1,440,697 + Dsui_1384 0.79 +0.6
1,440,705 - Dsui_1384 0.80 -0.6
1,440,705 - Dsui_1384 0.80 -0.8
1,440,813 + +0.6
1,440,887 + -1.7
1,440,926 - +0.1
1,441,024 + -1.2
1,441,106 - +0.6
1,441,111 - +0.6
1,441,213 - Dsui_1385 0.12 -2.0
1,441,286 + Dsui_1385 0.16 -1.0
1,441,597 + Dsui_1385 0.35 -1.0
1,441,638 - Dsui_1385 0.37 -0.4
1,441,704 - +0.6

Or see this region's nucleotide sequence