Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1383 and Dsui_1384 are separated by 45 nucleotides Dsui_1384 and Dsui_1385 are separated by 168 nucleotides
Dsui_1383: Dsui_1383 - transporter, monovalent cation:proton antiporter-2 (CPA2) family, at 1,438,149 to 1,440,116
_1383
Dsui_1384: Dsui_1384 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 1,440,162 to 1,440,839
_1384
Dsui_1385: Dsui_1385 - hypothetical protein, at 1,441,008 to 1,442,711
_1385
Position (kb)
1440
1441 Strain fitness (log2 ratio)
-2
-1
0
1 at 1439.190 kb on - strand at 1439.226 kb on + strand, within Dsui_1383 at 1439.364 kb on - strand at 1439.445 kb on + strand, within Dsui_1383 at 1439.453 kb on - strand, within Dsui_1383 at 1439.476 kb on - strand, within Dsui_1383 at 1439.509 kb on - strand, within Dsui_1383 at 1439.604 kb on + strand, within Dsui_1383 at 1439.656 kb on + strand, within Dsui_1383 at 1439.676 kb on + strand, within Dsui_1383 at 1439.688 kb on - strand, within Dsui_1383 at 1439.734 kb on - strand, within Dsui_1383 at 1439.780 kb on - strand at 1439.949 kb on - strand at 1439.949 kb on - strand at 1439.978 kb on + strand at 1440.088 kb on + strand at 1440.104 kb on + strand at 1440.112 kb on - strand at 1440.189 kb on - strand at 1440.549 kb on - strand, within Dsui_1384 at 1440.580 kb on - strand, within Dsui_1384 at 1440.697 kb on + strand, within Dsui_1384 at 1440.697 kb on + strand, within Dsui_1384 at 1440.697 kb on + strand, within Dsui_1384 at 1440.705 kb on - strand, within Dsui_1384 at 1440.705 kb on - strand, within Dsui_1384 at 1440.813 kb on + strand at 1440.887 kb on + strand at 1440.926 kb on - strand at 1441.024 kb on + strand at 1441.106 kb on - strand at 1441.111 kb on - strand at 1441.213 kb on - strand, within Dsui_1385 at 1441.286 kb on + strand, within Dsui_1385 at 1441.597 kb on + strand, within Dsui_1385 at 1441.638 kb on - strand, within Dsui_1385 at 1441.704 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 1,439,190 - +0.6 1,439,226 + Dsui_1383 0.55 -0.5 1,439,364 - +0.6 1,439,445 + Dsui_1383 0.66 -0.1 1,439,453 - Dsui_1383 0.66 -2.7 1,439,476 - Dsui_1383 0.67 -1.0 1,439,509 - Dsui_1383 0.69 +0.6 1,439,604 + Dsui_1383 0.74 -0.2 1,439,656 + Dsui_1383 0.77 -0.3 1,439,676 + Dsui_1383 0.78 -0.0 1,439,688 - Dsui_1383 0.78 +0.6 1,439,734 - Dsui_1383 0.81 +0.6 1,439,780 - +0.6 1,439,949 - -0.4 1,439,949 - -1.0 1,439,978 + -0.3 1,440,088 + -0.4 1,440,104 + +0.0 1,440,112 - -0.4 1,440,189 - -0.2 1,440,549 - Dsui_1384 0.57 -0.8 1,440,580 - Dsui_1384 0.62 -1.3 1,440,697 + Dsui_1384 0.79 -0.4 1,440,697 + Dsui_1384 0.79 +0.6 1,440,697 + Dsui_1384 0.79 +0.6 1,440,705 - Dsui_1384 0.80 -0.6 1,440,705 - Dsui_1384 0.80 -0.8 1,440,813 + +0.6 1,440,887 + -1.7 1,440,926 - +0.1 1,441,024 + -1.2 1,441,106 - +0.6 1,441,111 - +0.6 1,441,213 - Dsui_1385 0.12 -2.0 1,441,286 + Dsui_1385 0.16 -1.0 1,441,597 + Dsui_1385 0.35 -1.0 1,441,638 - Dsui_1385 0.37 -0.4 1,441,704 - +0.6
Or see this region's nucleotide sequence