Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1292 and Dsui_1293 are separated by 25 nucleotides Dsui_1293 and Dsui_1294 are separated by 10 nucleotides
Dsui_1292: Dsui_1292 - MSHA-type pilus biogenesis protein MshL, at 1,354,237 to 1,355,940
_1292
Dsui_1293: Dsui_1293 - type II secretory pathway, component ExeA (predicted ATPase), at 1,355,966 to 1,356,796
_1293
Dsui_1294: Dsui_1294 - hypothetical protein, at 1,356,807 to 1,357,931
_1294
Position (kb)
1355
1356
1357 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1355.057 kb on - strand, within Dsui_1292 at 1355.130 kb on - strand, within Dsui_1292 at 1355.130 kb on - strand, within Dsui_1292 at 1355.342 kb on - strand, within Dsui_1292 at 1355.347 kb on + strand, within Dsui_1292 at 1355.410 kb on + strand, within Dsui_1292 at 1355.430 kb on + strand, within Dsui_1292 at 1355.438 kb on - strand, within Dsui_1292 at 1355.471 kb on - strand, within Dsui_1292 at 1355.477 kb on + strand, within Dsui_1292 at 1355.504 kb on + strand, within Dsui_1292 at 1355.512 kb on - strand, within Dsui_1292 at 1355.524 kb on + strand, within Dsui_1292 at 1355.536 kb on - strand, within Dsui_1292 at 1355.747 kb on - strand, within Dsui_1292 at 1355.767 kb on + strand, within Dsui_1292 at 1355.781 kb on - strand at 1355.814 kb on - strand at 1355.824 kb on - strand at 1355.826 kb on + strand at 1355.854 kb on - strand at 1355.895 kb on + strand at 1355.931 kb on + strand at 1355.974 kb on - strand at 1355.989 kb on + strand at 1356.006 kb on + strand at 1356.029 kb on - strand at 1356.034 kb on + strand at 1356.089 kb on + strand, within Dsui_1293 at 1356.212 kb on - strand, within Dsui_1293 at 1356.229 kb on + strand, within Dsui_1293 at 1356.286 kb on + strand, within Dsui_1293 at 1356.366 kb on - strand, within Dsui_1293 at 1356.456 kb on + strand, within Dsui_1293 at 1356.584 kb on - strand, within Dsui_1293 at 1356.667 kb on + strand, within Dsui_1293 at 1356.688 kb on - strand, within Dsui_1293 at 1356.737 kb on - strand at 1356.739 kb on + strand at 1356.747 kb on - strand at 1356.757 kb on + strand at 1356.828 kb on + strand at 1356.835 kb on + strand at 1356.835 kb on + strand at 1356.845 kb on + strand at 1356.845 kb on + strand at 1356.851 kb on + strand at 1356.892 kb on + strand at 1356.893 kb on - strand at 1356.928 kb on + strand, within Dsui_1294 at 1356.951 kb on + strand, within Dsui_1294 at 1357.063 kb on + strand, within Dsui_1294 at 1357.085 kb on - strand, within Dsui_1294 at 1357.110 kb on - strand, within Dsui_1294 at 1357.112 kb on + strand, within Dsui_1294 at 1357.130 kb on + strand, within Dsui_1294 at 1357.253 kb on - strand, within Dsui_1294 at 1357.317 kb on + strand, within Dsui_1294 at 1357.325 kb on - strand, within Dsui_1294 at 1357.333 kb on + strand, within Dsui_1294 at 1357.333 kb on + strand, within Dsui_1294 at 1357.336 kb on - strand, within Dsui_1294 at 1357.369 kb on + strand, within Dsui_1294 at 1357.371 kb on + strand, within Dsui_1294 at 1357.371 kb on + strand, within Dsui_1294 at 1357.371 kb on + strand, within Dsui_1294 at 1357.379 kb on - strand, within Dsui_1294 at 1357.379 kb on - strand, within Dsui_1294 at 1357.416 kb on - strand, within Dsui_1294 at 1357.470 kb on - strand, within Dsui_1294 at 1357.550 kb on - strand, within Dsui_1294 at 1357.561 kb on + strand, within Dsui_1294 at 1357.569 kb on - strand, within Dsui_1294 at 1357.604 kb on - strand, within Dsui_1294 at 1357.652 kb on - strand, within Dsui_1294 at 1357.656 kb on + strand, within Dsui_1294 at 1357.755 kb on - strand, within Dsui_1294
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 1,355,057 - Dsui_1292 0.48 -1.0 1,355,130 - Dsui_1292 0.52 -0.4 1,355,130 - Dsui_1292 0.52 -1.4 1,355,342 - Dsui_1292 0.65 -2.2 1,355,347 + Dsui_1292 0.65 +0.8 1,355,410 + Dsui_1292 0.69 +0.7 1,355,430 + Dsui_1292 0.70 +0.4 1,355,438 - Dsui_1292 0.70 -0.4 1,355,471 - Dsui_1292 0.72 -2.2 1,355,477 + Dsui_1292 0.73 +0.7 1,355,504 + Dsui_1292 0.74 +0.4 1,355,512 - Dsui_1292 0.75 -2.1 1,355,524 + Dsui_1292 0.76 +0.7 1,355,536 - Dsui_1292 0.76 +0.6 1,355,747 - Dsui_1292 0.89 -1.0 1,355,767 + Dsui_1292 0.90 +0.6 1,355,781 - -1.4 1,355,814 - -2.8 1,355,824 - +0.6 1,355,826 + +0.6 1,355,854 - +0.6 1,355,895 + +0.6 1,355,931 + +0.1 1,355,974 - -2.6 1,355,989 + +0.8 1,356,006 + +0.4 1,356,029 - -0.5 1,356,034 + +0.4 1,356,089 + Dsui_1293 0.15 +0.7 1,356,212 - Dsui_1293 0.30 -2.0 1,356,229 + Dsui_1293 0.32 +0.5 1,356,286 + Dsui_1293 0.39 +0.5 1,356,366 - Dsui_1293 0.48 +0.6 1,356,456 + Dsui_1293 0.59 +0.6 1,356,584 - Dsui_1293 0.74 +0.6 1,356,667 + Dsui_1293 0.84 +0.2 1,356,688 - Dsui_1293 0.87 -1.4 1,356,737 - -0.4 1,356,739 + -0.1 1,356,747 - -1.0 1,356,757 + +0.3 1,356,828 + +0.7 1,356,835 + +0.5 1,356,835 + +0.3 1,356,845 + -0.3 1,356,845 + +0.5 1,356,851 + +0.4 1,356,892 + +0.2 1,356,893 - -1.7 1,356,928 + Dsui_1294 0.11 +0.6 1,356,951 + Dsui_1294 0.13 +0.3 1,357,063 + Dsui_1294 0.23 +0.4 1,357,085 - Dsui_1294 0.25 -1.4 1,357,110 - Dsui_1294 0.27 -1.7 1,357,112 + Dsui_1294 0.27 +0.7 1,357,130 + Dsui_1294 0.29 +0.0 1,357,253 - Dsui_1294 0.40 -1.7 1,357,317 + Dsui_1294 0.45 +0.3 1,357,325 - Dsui_1294 0.46 -1.0 1,357,333 + Dsui_1294 0.47 +0.5 1,357,333 + Dsui_1294 0.47 +0.2 1,357,336 - Dsui_1294 0.47 -2.4 1,357,369 + Dsui_1294 0.50 +0.3 1,357,371 + Dsui_1294 0.50 +0.7 1,357,371 + Dsui_1294 0.50 +0.2 1,357,371 + Dsui_1294 0.50 +0.2 1,357,379 - Dsui_1294 0.51 -1.4 1,357,379 - Dsui_1294 0.51 -0.4 1,357,416 - Dsui_1294 0.54 -0.4 1,357,470 - Dsui_1294 0.59 -0.4 1,357,550 - Dsui_1294 0.66 +0.6 1,357,561 + Dsui_1294 0.67 +0.7 1,357,569 - Dsui_1294 0.68 -2.0 1,357,604 - Dsui_1294 0.71 -0.4 1,357,652 - Dsui_1294 0.75 -2.8 1,357,656 + Dsui_1294 0.75 +0.5 1,357,755 - Dsui_1294 0.84 -1.0
Or see this region's nucleotide sequence