Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0269 and Dsui_0270 are separated by 8 nucleotides Dsui_0270 and Dsui_0271 are separated by 77 nucleotides Dsui_0271 and Dsui_0272 overlap by 4 nucleotides
Dsui_0269: Dsui_0269 - ABC-type multidrug transport system, permease component, at 270,523 to 271,659
_0269
Dsui_0270: Dsui_0270 - transcriptional regulator, at 271,668 to 272,336
_0270
Dsui_0271: Dsui_0271 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 272,414 to 273,121
_0271
Dsui_0272: Dsui_0272 - osmosensitive K+ channel histidine kinase, at 273,118 to 275,814
_0272
Position (kb) 271
272
273 Strain fitness (log2 ratio) -2
-1
0
1
2 at 270.705 kb on + strand, within Dsui_0269 at 270.705 kb on - strand, within Dsui_0269 at 270.750 kb on + strand, within Dsui_0269 at 270.818 kb on + strand, within Dsui_0269 at 270.918 kb on - strand, within Dsui_0269 at 270.918 kb on - strand, within Dsui_0269 at 271.029 kb on + strand, within Dsui_0269 at 271.067 kb on + strand, within Dsui_0269 at 271.171 kb on + strand, within Dsui_0269 at 271.179 kb on - strand, within Dsui_0269 at 271.189 kb on - strand, within Dsui_0269 at 271.203 kb on + strand, within Dsui_0269 at 271.211 kb on - strand, within Dsui_0269 at 271.329 kb on - strand, within Dsui_0269 at 271.340 kb on - strand, within Dsui_0269 at 271.383 kb on + strand, within Dsui_0269 at 271.412 kb on + strand, within Dsui_0269 at 271.529 kb on - strand, within Dsui_0269 at 271.653 kb on + strand at 271.661 kb on - strand at 271.844 kb on - strand, within Dsui_0270 at 272.039 kb on + strand, within Dsui_0270 at 272.039 kb on + strand, within Dsui_0270 at 272.047 kb on - strand, within Dsui_0270 at 272.167 kb on + strand, within Dsui_0270 at 272.226 kb on + strand, within Dsui_0270 at 272.478 kb on + strand at 272.502 kb on + strand at 272.751 kb on + strand at 272.830 kb on + strand, within Dsui_0271 at 272.988 kb on - strand, within Dsui_0271 at 273.012 kb on + strand, within Dsui_0271 at 273.012 kb on + strand, within Dsui_0271 at 273.020 kb on - strand, within Dsui_0271 at 273.034 kb on - strand, within Dsui_0271 at 273.034 kb on - strand, within Dsui_0271
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 270,705 + Dsui_0269 0.16 -0.3 270,705 - Dsui_0269 0.16 -0.8 270,750 + Dsui_0269 0.20 +1.7 270,818 + Dsui_0269 0.26 +0.0 270,918 - Dsui_0269 0.35 -1.3 270,918 - Dsui_0269 0.35 +0.7 271,029 + Dsui_0269 0.45 -0.3 271,067 + Dsui_0269 0.48 -1.8 271,171 + Dsui_0269 0.57 -1.3 271,179 - Dsui_0269 0.58 -0.8 271,189 - Dsui_0269 0.59 -2.3 271,203 + Dsui_0269 0.60 -1.6 271,211 - Dsui_0269 0.61 -0.3 271,329 - Dsui_0269 0.71 +0.7 271,340 - Dsui_0269 0.72 +1.7 271,383 + Dsui_0269 0.76 -0.3 271,412 + Dsui_0269 0.78 -0.8 271,529 - Dsui_0269 0.88 -0.3 271,653 + -0.8 271,661 - -0.3 271,844 - Dsui_0270 0.26 +0.7 272,039 + Dsui_0270 0.55 -0.5 272,039 + Dsui_0270 0.55 +2.6 272,047 - Dsui_0270 0.57 +0.7 272,167 + Dsui_0270 0.75 +1.4 272,226 + Dsui_0270 0.83 -0.3 272,478 + -0.3 272,502 + +0.7 272,751 + -0.3 272,830 + Dsui_0271 0.59 -0.8 272,988 - Dsui_0271 0.81 -2.6 273,012 + Dsui_0271 0.84 -1.8 273,012 + Dsui_0271 0.84 -0.3 273,020 - Dsui_0271 0.86 -1.3 273,034 - Dsui_0271 0.88 -0.8 273,034 - Dsui_0271 0.88 +0.2
Or see this region's nucleotide sequence