Strain Fitness in Dechlorosoma suillum PS around Dsui_0075

Experiment: L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0074 and Dsui_0075 are separated by 149 nucleotidesDsui_0075 and Dsui_0076 overlap by 1 nucleotidesDsui_0076 and Dsui_0077 overlap by 4 nucleotides Dsui_0074: Dsui_0074 - hypothetical protein, at 70,276 to 71,760 _0074 Dsui_0075: Dsui_0075 - hypothetical protein, at 71,910 to 72,812 _0075 Dsui_0076: Dsui_0076 - acetyltransferase, ribosomal protein N-acetylase, at 72,812 to 73,354 _0076 Dsui_0077: Dsui_0077 - putative PLP-dependent enzyme possibly involved in cell wall biogenesis, at 73,351 to 74,643 _0077 Position (kb) 71 72 73Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 70.943 kb on - strand, within Dsui_0074at 70.950 kb on - strand, within Dsui_0074at 70.950 kb on - strand, within Dsui_0074at 71.037 kb on - strand, within Dsui_0074at 71.053 kb on + strand, within Dsui_0074at 71.053 kb on + strand, within Dsui_0074at 71.061 kb on - strand, within Dsui_0074at 71.105 kb on + strand, within Dsui_0074at 71.118 kb on - strand, within Dsui_0074at 71.123 kb on + strand, within Dsui_0074at 71.131 kb on - strand, within Dsui_0074at 71.186 kb on + strand, within Dsui_0074at 71.207 kb on + strand, within Dsui_0074at 71.207 kb on + strand, within Dsui_0074at 71.209 kb on + strand, within Dsui_0074at 71.217 kb on - strand, within Dsui_0074at 71.217 kb on - strand, within Dsui_0074at 71.245 kb on - strand, within Dsui_0074at 71.250 kb on + strand, within Dsui_0074at 71.256 kb on - strand, within Dsui_0074at 71.270 kb on + strand, within Dsui_0074at 71.278 kb on - strand, within Dsui_0074at 71.295 kb on + strand, within Dsui_0074at 71.297 kb on - strand, within Dsui_0074at 71.309 kb on + strand, within Dsui_0074at 71.309 kb on + strand, within Dsui_0074at 71.309 kb on + strand, within Dsui_0074at 71.309 kb on - strand, within Dsui_0074at 71.310 kb on + strand, within Dsui_0074at 71.315 kb on + strand, within Dsui_0074at 71.317 kb on - strand, within Dsui_0074at 71.317 kb on - strand, within Dsui_0074at 71.328 kb on - strand, within Dsui_0074at 71.333 kb on - strand, within Dsui_0074at 71.427 kb on + strand, within Dsui_0074at 71.455 kb on + strand, within Dsui_0074at 71.509 kb on + strand, within Dsui_0074at 71.695 kb on - strandat 71.757 kb on - strandat 71.764 kb on - strandat 71.804 kb on + strandat 71.856 kb on + strandat 71.856 kb on + strandat 71.856 kb on + strandat 71.856 kb on + strandat 71.856 kb on + strandat 71.864 kb on - strandat 71.864 kb on - strandat 71.864 kb on - strandat 71.864 kb on - strandat 71.864 kb on - strandat 71.864 kb on - strandat 71.886 kb on + strandat 71.886 kb on + strandat 71.887 kb on + strandat 71.887 kb on + strandat 71.894 kb on - strandat 71.894 kb on - strandat 71.913 kb on + strandat 71.970 kb on - strandat 71.970 kb on - strandat 72.032 kb on - strand, within Dsui_0075at 72.039 kb on - strand, within Dsui_0075at 72.051 kb on + strand, within Dsui_0075at 72.051 kb on + strand, within Dsui_0075at 72.051 kb on + strand, within Dsui_0075at 72.051 kb on + strand, within Dsui_0075at 72.051 kb on + strand, within Dsui_0075at 72.051 kb on + strand, within Dsui_0075at 72.052 kb on - strand, within Dsui_0075at 72.059 kb on - strand, within Dsui_0075at 72.059 kb on - strand, within Dsui_0075at 72.060 kb on - strand, within Dsui_0075at 72.111 kb on + strand, within Dsui_0075at 72.119 kb on - strand, within Dsui_0075at 72.119 kb on - strand, within Dsui_0075at 72.203 kb on - strand, within Dsui_0075at 72.206 kb on + strand, within Dsui_0075at 72.209 kb on - strand, within Dsui_0075at 72.209 kb on - strand, within Dsui_0075at 72.218 kb on - strand, within Dsui_0075at 72.222 kb on - strand, within Dsui_0075at 72.256 kb on + strand, within Dsui_0075at 72.256 kb on + strand, within Dsui_0075at 72.295 kb on + strand, within Dsui_0075at 72.304 kb on + strand, within Dsui_0075at 72.371 kb on - strand, within Dsui_0075at 72.376 kb on + strand, within Dsui_0075at 72.376 kb on + strand, within Dsui_0075at 72.441 kb on + strand, within Dsui_0075at 72.442 kb on + strand, within Dsui_0075at 72.442 kb on + strand, within Dsui_0075at 72.467 kb on - strand, within Dsui_0075at 72.473 kb on - strand, within Dsui_0075at 72.476 kb on + strand, within Dsui_0075at 72.496 kb on + strand, within Dsui_0075at 72.498 kb on + strand, within Dsui_0075at 72.498 kb on + strand, within Dsui_0075at 72.504 kb on - strand, within Dsui_0075at 72.508 kb on - strand, within Dsui_0075at 72.565 kb on + strand, within Dsui_0075at 72.573 kb on - strand, within Dsui_0075at 72.612 kb on + strand, within Dsui_0075at 72.643 kb on + strand, within Dsui_0075at 72.648 kb on + strand, within Dsui_0075at 72.648 kb on + strand, within Dsui_0075at 72.651 kb on - strand, within Dsui_0075at 72.656 kb on - strand, within Dsui_0075at 72.656 kb on - strand, within Dsui_0075at 72.690 kb on - strand, within Dsui_0075at 72.728 kb on - strandat 72.738 kb on - strandat 72.765 kb on + strandat 72.773 kb on + strandat 72.840 kb on + strandat 72.840 kb on + strandat 72.840 kb on + strandat 72.840 kb on + strandat 72.843 kb on - strandat 72.848 kb on - strandat 72.848 kb on - strandat 72.848 kb on - strandat 72.865 kb on + strandat 72.865 kb on + strandat 72.865 kb on + strandat 72.873 kb on - strand, within Dsui_0076at 72.895 kb on - strand, within Dsui_0076at 72.897 kb on + strand, within Dsui_0076at 72.918 kb on - strand, within Dsui_0076at 72.918 kb on - strand, within Dsui_0076at 72.934 kb on + strand, within Dsui_0076at 72.937 kb on - strand, within Dsui_0076at 72.991 kb on + strand, within Dsui_0076at 73.038 kb on - strand, within Dsui_0076at 73.053 kb on - strand, within Dsui_0076at 73.076 kb on - strand, within Dsui_0076at 73.081 kb on - strand, within Dsui_0076at 73.131 kb on - strand, within Dsui_0076at 73.131 kb on - strand, within Dsui_0076at 73.164 kb on + strand, within Dsui_0076at 73.164 kb on + strand, within Dsui_0076at 73.172 kb on - strand, within Dsui_0076at 73.185 kb on - strand, within Dsui_0076at 73.190 kb on - strand, within Dsui_0076at 73.194 kb on - strand, within Dsui_0076at 73.285 kb on + strand, within Dsui_0076at 73.287 kb on - strand, within Dsui_0076at 73.293 kb on - strand, within Dsui_0076at 73.293 kb on - strand, within Dsui_0076at 73.295 kb on + strand, within Dsui_0076at 73.303 kb on - strandat 73.313 kb on - strandat 73.370 kb on - strandat 73.373 kb on + strandat 73.376 kb on - strandat 73.381 kb on - strandat 73.381 kb on - strandat 73.381 kb on - strandat 73.381 kb on - strandat 73.425 kb on + strandat 73.435 kb on + strandat 73.501 kb on - strand, within Dsui_0077at 73.509 kb on + strand, within Dsui_0077at 73.532 kb on + strand, within Dsui_0077at 73.532 kb on + strand, within Dsui_0077at 73.545 kb on - strand, within Dsui_0077at 73.593 kb on - strand, within Dsui_0077at 73.618 kb on + strand, within Dsui_0077at 73.639 kb on + strand, within Dsui_0077at 73.642 kb on - strand, within Dsui_0077at 73.674 kb on + strand, within Dsui_0077at 73.681 kb on + strand, within Dsui_0077at 73.689 kb on - strand, within Dsui_0077at 73.689 kb on - strand, within Dsui_0077at 73.689 kb on - strand, within Dsui_0077at 73.689 kb on - strand, within Dsui_0077at 73.697 kb on - strand, within Dsui_0077at 73.710 kb on + strand, within Dsui_0077at 73.731 kb on + strand, within Dsui_0077at 73.739 kb on - strand, within Dsui_0077at 73.739 kb on - strand, within Dsui_0077at 73.739 kb on - strand, within Dsui_0077at 73.798 kb on + strand, within Dsui_0077at 73.812 kb on + strand, within Dsui_0077at 73.812 kb on + strand, within Dsui_0077

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lactate (C)
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70,943 - Dsui_0074 0.45 +0.6
70,950 - Dsui_0074 0.45 +1.0
70,950 - Dsui_0074 0.45 +0.9
71,037 - Dsui_0074 0.51 +0.7
71,053 + Dsui_0074 0.52 +0.7
71,053 + Dsui_0074 0.52 -1.9
71,061 - Dsui_0074 0.53 +1.1
71,105 + Dsui_0074 0.56 -0.3
71,118 - Dsui_0074 0.57 +1.0
71,123 + Dsui_0074 0.57 +0.7
71,131 - Dsui_0074 0.58 +0.9
71,186 + Dsui_0074 0.61 -0.3
71,207 + Dsui_0074 0.63 -0.3
71,207 + Dsui_0074 0.63 +0.7
71,209 + Dsui_0074 0.63 -0.9
71,217 - Dsui_0074 0.63 +0.9
71,217 - Dsui_0074 0.63 +0.9
71,245 - Dsui_0074 0.65 +0.9
71,250 + Dsui_0074 0.66 -0.3
71,256 - Dsui_0074 0.66 +0.8
71,270 + Dsui_0074 0.67 -1.6
71,278 - Dsui_0074 0.67 +1.0
71,295 + Dsui_0074 0.69 -0.3
71,297 - Dsui_0074 0.69 +0.8
71,309 + Dsui_0074 0.70 -0.3
71,309 + Dsui_0074 0.70 -1.6
71,309 + Dsui_0074 0.70 +0.7
71,309 - Dsui_0074 0.70 +0.7
71,310 + Dsui_0074 0.70 -2.1
71,315 + Dsui_0074 0.70 -0.3
71,317 - Dsui_0074 0.70 +0.7
71,317 - Dsui_0074 0.70 +0.9
71,328 - Dsui_0074 0.71 +1.2
71,333 - Dsui_0074 0.71 +0.9
71,427 + Dsui_0074 0.78 +0.7
71,455 + Dsui_0074 0.79 -0.9
71,509 + Dsui_0074 0.83 -0.9
71,695 - +0.6
71,757 - +0.8
71,764 - +0.9
71,804 + +0.7
71,856 + -0.9
71,856 + +0.7
71,856 + -0.9
71,856 + +0.7
71,856 + -2.3
71,864 - +1.1
71,864 - +1.0
71,864 - +1.2
71,864 - +1.0
71,864 - +0.9
71,864 - +0.8
71,886 + -1.6
71,886 + -0.3
71,887 + -1.3
71,887 + +0.7
71,894 - +0.5
71,894 - +0.8
71,913 + -1.6
71,970 - +0.7
71,970 - +0.8
72,032 - Dsui_0075 0.14 +0.8
72,039 - Dsui_0075 0.14 +0.8
72,051 + Dsui_0075 0.16 +0.7
72,051 + Dsui_0075 0.16 -0.9
72,051 + Dsui_0075 0.16 -2.3
72,051 + Dsui_0075 0.16 +0.7
72,051 + Dsui_0075 0.16 +0.7
72,051 + Dsui_0075 0.16 -0.9
72,052 - Dsui_0075 0.16 +0.3
72,059 - Dsui_0075 0.17 +0.2
72,059 - Dsui_0075 0.17 +0.6
72,060 - Dsui_0075 0.17 +0.7
72,111 + Dsui_0075 0.22 -0.6
72,119 - Dsui_0075 0.23 +0.7
72,119 - Dsui_0075 0.23 +0.7
72,203 - Dsui_0075 0.32 +0.8
72,206 + Dsui_0075 0.33 -0.3
72,209 - Dsui_0075 0.33 +0.5
72,209 - Dsui_0075 0.33 +0.7
72,218 - Dsui_0075 0.34 +0.6
72,222 - Dsui_0075 0.35 +0.6
72,256 + Dsui_0075 0.38 -2.1
72,256 + Dsui_0075 0.38 -1.3
72,295 + Dsui_0075 0.43 -0.9
72,304 + Dsui_0075 0.44 +0.7
72,371 - Dsui_0075 0.51 +0.9
72,376 + Dsui_0075 0.52 +0.7
72,376 + Dsui_0075 0.52 +0.7
72,441 + Dsui_0075 0.59 -0.9
72,442 + Dsui_0075 0.59 -0.3
72,442 + Dsui_0075 0.59 -0.9
72,467 - Dsui_0075 0.62 +0.8
72,473 - Dsui_0075 0.62 +1.1
72,476 + Dsui_0075 0.63 -0.3
72,496 + Dsui_0075 0.65 -1.3
72,498 + Dsui_0075 0.65 +0.7
72,498 + Dsui_0075 0.65 +0.7
72,504 - Dsui_0075 0.66 +0.5
72,508 - Dsui_0075 0.66 +0.8
72,565 + Dsui_0075 0.73 -2.3
72,573 - Dsui_0075 0.73 +0.5
72,612 + Dsui_0075 0.78 -0.9
72,643 + Dsui_0075 0.81 +0.7
72,648 + Dsui_0075 0.82 +0.7
72,648 + Dsui_0075 0.82 -2.1
72,651 - Dsui_0075 0.82 +0.7
72,656 - Dsui_0075 0.83 +0.8
72,656 - Dsui_0075 0.83 +0.6
72,690 - Dsui_0075 0.86 +1.0
72,728 - +0.8
72,738 - +0.7
72,765 + -0.9
72,773 + -0.3
72,840 + -0.3
72,840 + -0.3
72,840 + +0.7
72,840 + -0.9
72,843 - +0.2
72,848 - -0.0
72,848 - -0.1
72,848 - +0.2
72,865 + +0.7
72,865 + +0.7
72,865 + -1.3
72,873 - Dsui_0076 0.11 +0.9
72,895 - Dsui_0076 0.15 +1.0
72,897 + Dsui_0076 0.16 +0.7
72,918 - Dsui_0076 0.20 +0.5
72,918 - Dsui_0076 0.20 +0.7
72,934 + Dsui_0076 0.22 +0.7
72,937 - Dsui_0076 0.23 +0.9
72,991 + Dsui_0076 0.33 +0.7
73,038 - Dsui_0076 0.42 +0.9
73,053 - Dsui_0076 0.44 +0.5
73,076 - Dsui_0076 0.49 +1.0
73,081 - Dsui_0076 0.50 +0.9
73,131 - Dsui_0076 0.59 +1.0
73,131 - Dsui_0076 0.59 +0.6
73,164 + Dsui_0076 0.65 +0.7
73,164 + Dsui_0076 0.65 -0.3
73,172 - Dsui_0076 0.66 +0.7
73,185 - Dsui_0076 0.69 +0.8
73,190 - Dsui_0076 0.70 +0.7
73,194 - Dsui_0076 0.70 +0.8
73,285 + Dsui_0076 0.87 +0.7
73,287 - Dsui_0076 0.87 +1.4
73,293 - Dsui_0076 0.89 +0.8
73,293 - Dsui_0076 0.89 +0.9
73,295 + Dsui_0076 0.89 +0.7
73,303 - +1.0
73,313 - +0.9
73,370 - -0.1
73,373 + -0.3
73,376 - +0.6
73,381 - +0.6
73,381 - +0.3
73,381 - +0.6
73,381 - +0.5
73,425 + +0.7
73,435 + +0.7
73,501 - Dsui_0077 0.12 +0.7
73,509 + Dsui_0077 0.12 -3.2
73,532 + Dsui_0077 0.14 -0.9
73,532 + Dsui_0077 0.14 -2.1
73,545 - Dsui_0077 0.15 +0.7
73,593 - Dsui_0077 0.19 +1.0
73,618 + Dsui_0077 0.21 -0.3
73,639 + Dsui_0077 0.22 +0.7
73,642 - Dsui_0077 0.23 +0.4
73,674 + Dsui_0077 0.25 -0.9
73,681 + Dsui_0077 0.26 -0.9
73,689 - Dsui_0077 0.26 +2.0
73,689 - Dsui_0077 0.26 +0.7
73,689 - Dsui_0077 0.26 +0.5
73,689 - Dsui_0077 0.26 +0.4
73,697 - Dsui_0077 0.27 +0.7
73,710 + Dsui_0077 0.28 -2.5
73,731 + Dsui_0077 0.29 +0.7
73,739 - Dsui_0077 0.30 +1.0
73,739 - Dsui_0077 0.30 +0.7
73,739 - Dsui_0077 0.30 +1.0
73,798 + Dsui_0077 0.35 -1.3
73,812 + Dsui_0077 0.36 -2.9
73,812 + Dsui_0077 0.36 -1.6

Or see this region's nucleotide sequence