Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03615

Experiment: PYE 0.5x 30C survival rep1 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep1 12 days
3,767,722	+		CCNA_03613	0.10	-0.1
3,767,722	+		CCNA_03613	0.10	-0.9
3,767,724	+		CCNA_03613	0.11	-0.1
3,767,758	+		CCNA_03613	0.18	+0.5
3,767,798	+		CCNA_03613	0.27	-0.7
3,767,798	+		CCNA_03613	0.27	+0.6
3,767,798	+		CCNA_03613	0.27	-1.3
3,767,806	-		CCNA_03613	0.29	-0.9
3,767,806	-		CCNA_03613	0.29	+0.3
3,767,806	-		CCNA_03613	0.29	-0.6
3,767,806	-		CCNA_03613	0.29	-0.7
3,767,811	+		CCNA_03613	0.30	+2.3
3,767,817	+		CCNA_03613	0.31	-0.7
3,767,817	+		CCNA_03613	0.31	-0.7
3,767,867	-		CCNA_03613	0.42	+0.8
3,767,887	+		CCNA_03613	0.47	-0.5
3,767,889	-		CCNA_03613	0.47	+0.1
3,767,900	-		CCNA_03613	0.49	+0.3
3,767,910	-		CCNA_03613	0.52	-1.6
3,767,913	-		CCNA_03613	0.52	+0.3
3,767,932	+		CCNA_03613	0.57	-0.1
3,767,937	+		CCNA_03613	0.58	-0.9
3,767,940	-		CCNA_03613	0.58	+0.3
3,767,942	+		CCNA_03613	0.59	-1.0
3,767,942	+		CCNA_03613	0.59	-0.5
3,767,944	+		CCNA_03613	0.59	-1.5
3,767,950	-		CCNA_03613	0.60	-0.5
3,767,951	-		CCNA_03613	0.61	+3.3
3,767,954	+		CCNA_03613	0.61	+0.0
3,767,972	-		CCNA_03613	0.65	-2.1
3,768,033	+		CCNA_03613	0.79	-0.6
3,768,041	-		CCNA_03613	0.81	+0.7
3,768,041	-		CCNA_03613	0.81	-1.1
3,768,041	-		CCNA_03613	0.81	-1.2
3,768,048	+		CCNA_03613	0.82	-0.1
3,768,048	+		CCNA_03613	0.82	+0.7
3,768,056	-		CCNA_03613	0.84	-0.4
3,768,096	-				-0.9
3,768,117	+				-0.1
3,768,130	+				-0.3
3,768,148	+				+0.5
3,768,160	+				-0.1
3,768,166	+				+0.5
3,768,174	-				+0.9
3,768,185	+				-0.0
3,768,193	-				-0.5
3,768,193	-				-1.0
3,768,193	-				-0.9
3,768,215	+				-3.4
3,768,223	-				-2.4
3,768,250	+		CCNA_03614	0.14	-2.8
3,768,250	+		CCNA_03614	0.14	-2.5
3,768,262	+		CCNA_03614	0.17	-0.3
3,768,276	-				+2.3
3,768,314	+		CCNA_03614	0.29	-2.4
3,768,320	+		CCNA_03614	0.31	-1.9
3,768,327	+		CCNA_03614	0.32	-3.1
3,768,334	+		CCNA_03614	0.34	-4.0
3,768,334	+		CCNA_03614	0.34	-2.9
3,768,334	+		CCNA_03614	0.34	-4.1
3,768,334	+		CCNA_03614	0.34	-2.9
3,768,342	-		CCNA_03614	0.36	-2.1
3,768,342	-		CCNA_03614	0.36	-0.7
3,768,380	+		CCNA_03614	0.45	-0.5
3,768,443	-		CCNA_03614	0.59	-3.0
3,768,444	-		CCNA_03614	0.60	-0.3
3,768,452	+		CCNA_03614	0.62	-2.1
3,768,460	-		CCNA_03614	0.63	-1.2
3,768,472	+		CCNA_03614	0.66	-1.0
3,768,512	-		CCNA_03614	0.76	-2.1
3,768,566	-		CCNA_03614	0.88	-1.6
3,768,593	+				-1.9
3,768,605	+				-1.6
3,768,605	+				-3.2
3,768,605	+				-3.0
3,768,605	+				-3.0
3,768,605	+				-3.8
3,768,618	-				-2.7
3,768,654	+				-2.6
3,768,664	-				-2.2
3,768,747	+				-3.5
3,768,773	+				-2.8
3,768,785	-				-3.2
3,768,802	+				-3.5
3,768,932	+				+0.3
3,768,945	+		CCNA_03615	0.11	-3.0
3,768,969	+		CCNA_03615	0.12	-2.1
3,768,972	-		CCNA_03615	0.12	-4.5
3,768,972	-		CCNA_03615	0.12	-0.6
3,768,997	-		CCNA_03615	0.14	-3.7
3,769,091	-		CCNA_03615	0.18	-3.2
3,769,110	+		CCNA_03615	0.19	-2.4
3,769,117	+		CCNA_03615	0.19	-2.6
3,769,117	+		CCNA_03615	0.19	-3.0
3,769,174	-		CCNA_03615	0.22	-1.7
3,769,185	+				+0.7
3,769,193	-		CCNA_03615	0.23	+0.1
3,769,193	-		CCNA_03615	0.23	-2.6
3,769,206	+		CCNA_03615	0.24	-2.8
3,769,211	-		CCNA_03615	0.24	-3.5
3,769,216	-		CCNA_03615	0.24	-2.1
3,769,272	+		CCNA_03615	0.27	-3.4
3,769,292	-		CCNA_03615	0.28	-3.2
3,769,323	+		CCNA_03615	0.29	-3.5
3,769,325	+		CCNA_03615	0.30	-2.8
3,769,371	+		CCNA_03615	0.32	-3.4
3,769,371	+		CCNA_03615	0.32	-3.2
3,769,371	+		CCNA_03615	0.32	-4.7
3,769,379	-		CCNA_03615	0.32	-1.6
3,769,379	-		CCNA_03615	0.32	-2.8
3,769,440	+		CCNA_03615	0.35	-3.8
3,769,454	+		CCNA_03615	0.36	-2.6
3,769,463	-		CCNA_03615	0.36	-2.5
3,769,463	-		CCNA_03615	0.36	-4.4
3,769,463	-		CCNA_03615	0.36	-2.5
3,769,520	+		CCNA_03615	0.39	-1.9
3,769,520	+		CCNA_03615	0.39	-2.9
3,769,520	+		CCNA_03615	0.39	-2.9
3,769,520	+		CCNA_03615	0.39	-1.8
3,769,520	+		CCNA_03615	0.39	-3.3
3,769,520	+		CCNA_03615	0.39	-2.9
3,769,520	+		CCNA_03615	0.39	-1.4
3,769,528	-		CCNA_03615	0.39	-1.6
3,769,528	-		CCNA_03615	0.39	-3.5
3,769,528	-		CCNA_03615	0.39	-2.4
3,769,567	-		CCNA_03615	0.41	-1.1
3,769,581	-		CCNA_03615	0.42	-2.2
3,769,581	-		CCNA_03615	0.42	-3.1
3,769,612	-		CCNA_03615	0.43	-1.2
3,769,649	+		CCNA_03615	0.45	-3.4
3,769,654	+		CCNA_03615	0.45	-1.7
3,769,662	-		CCNA_03615	0.46	-3.5
3,769,667	-		CCNA_03615	0.46	-3.7
3,769,668	+		CCNA_03615	0.46	-3.0
3,769,676	-		CCNA_03615	0.47	-4.5
3,769,676	-		CCNA_03615	0.47	-1.7
3,769,708	+		CCNA_03615	0.48	-1.7
3,769,741	-		CCNA_03615	0.50	-0.3
3,769,785	+		CCNA_03615	0.52	-2.9
3,769,811	-		CCNA_03615	0.53	-2.6
3,769,820	-		CCNA_03615	0.54	-3.2
3,769,858	+		CCNA_03615	0.55	-3.0
3,769,866	+		CCNA_03615	0.56	-2.8
3,769,866	+		CCNA_03615	0.56	-4.1
3,769,868	+		CCNA_03615	0.56	-1.7
3,769,904	+		CCNA_03615	0.58	-3.0
3,769,910	+		CCNA_03615	0.58	-3.8
3,769,933	-		CCNA_03615	0.59	-2.6
3,769,937	+		CCNA_03615	0.59	-2.8
3,769,956	-		CCNA_03615	0.60	-2.3
3,769,958	+		CCNA_03615	0.60	-2.3
3,769,958	+		CCNA_03615	0.60	-3.6
3,769,966	-		CCNA_03615	0.61	-1.1
3,769,966	-		CCNA_03615	0.61	-0.7
3,769,966	-		CCNA_03615	0.61	-3.2
3,769,971	+		CCNA_03615	0.61	-3.5
3,769,988	+		CCNA_03615	0.62	-1.3
3,769,998	+		CCNA_03615	0.62	-3.4
3,770,028	+		CCNA_03615	0.64	-2.1
3,770,028	+		CCNA_03615	0.64	-3.2
3,770,028	+		CCNA_03615	0.64	-3.5
3,770,036	-		CCNA_03615	0.64	-4.5
3,770,036	-		CCNA_03615	0.64	-2.9
3,770,036	-		CCNA_03615	0.64	-1.1
3,770,036	-		CCNA_03615	0.64	-1.9
3,770,060	+		CCNA_03615	0.65	-2.7
3,770,063	-		CCNA_03615	0.65	-1.5
3,770,065	+		CCNA_03615	0.65	-3.5
3,770,087	+		CCNA_03615	0.66	-1.9
3,770,087	+		CCNA_03615	0.66	-1.9
3,770,097	+		CCNA_03615	0.67	-3.1
3,770,155	+		CCNA_03615	0.70	-1.9
3,770,155	+		CCNA_03615	0.70	-3.4
3,770,180	+		CCNA_03615	0.71	-4.1
3,770,180	+		CCNA_03615	0.71	-2.9
3,770,188	-		CCNA_03615	0.71	-1.6
3,770,188	-		CCNA_03615	0.71	-3.1
3,770,198	-		CCNA_03615	0.72	-2.5
3,770,220	+		CCNA_03615	0.73	-0.7
3,770,220	+		CCNA_03615	0.73	-2.2
3,770,220	+		CCNA_03615	0.73	-2.3
3,770,225	+		CCNA_03615	0.73	+1.3
3,770,225	+		CCNA_03615	0.73	-1.8
3,770,233	+		CCNA_03615	0.74	-3.6
3,770,233	+		CCNA_03615	0.74	-1.8
3,770,235	-		CCNA_03615	0.74	-3.4
3,770,238	+		CCNA_03615	0.74	-2.6
3,770,238	+		CCNA_03615	0.74	-3.6
3,770,238	+		CCNA_03615	0.74	-3.3
3,770,238	+		CCNA_03615	0.74	-3.8
3,770,238	+		CCNA_03615	0.74	-2.5
3,770,238	+		CCNA_03615	0.74	-3.8
3,770,238	+		CCNA_03615	0.74	-2.0
3,770,238	+		CCNA_03615	0.74	-3.2
3,770,238	+		CCNA_03615	0.74	-3.5
3,770,238	+		CCNA_03615	0.74	-2.5
3,770,238	+		CCNA_03615	0.74	-2.1
3,770,241	-		CCNA_03615	0.74	-3.5
3,770,246	-		CCNA_03615	0.74	-2.0
3,770,246	-		CCNA_03615	0.74	-0.1
3,770,246	-		CCNA_03615	0.74	-1.8
3,770,246	-		CCNA_03615	0.74	-1.7
3,770,246	-		CCNA_03615	0.74	-3.0
3,770,246	-		CCNA_03615	0.74	-1.4
3,770,246	-		CCNA_03615	0.74	-1.8
3,770,253	+				-0.7
3,770,255	+		CCNA_03615	0.75	-2.7
3,770,262	+		CCNA_03615	0.75	-1.1
3,770,276	-		CCNA_03615	0.76	-4.2
3,770,279	-		CCNA_03615	0.76	-2.0
3,770,281	+		CCNA_03615	0.76	-0.8
3,770,281	-		CCNA_03615	0.76	-1.6
3,770,333	-		CCNA_03615	0.78	-2.9
3,770,347	-		CCNA_03615	0.79	-2.5
3,770,349	+		CCNA_03615	0.79	-2.6
3,770,349	+		CCNA_03615	0.79	-3.0
3,770,349	+		CCNA_03615	0.79	-3.6
3,770,349	+		CCNA_03615	0.79	-2.5
3,770,349	+		CCNA_03615	0.79	-2.8
3,770,349	+		CCNA_03615	0.79	-2.7
3,770,349	+		CCNA_03615	0.79	-3.3
3,770,349	+		CCNA_03615	0.79	-1.4
3,770,349	+		CCNA_03615	0.79	-2.7
3,770,349	+		CCNA_03615	0.79	-3.0
3,770,349	+		CCNA_03615	0.79	-2.9
3,770,349	+		CCNA_03615	0.79	-2.1
3,770,349	+		CCNA_03615	0.79	-1.3
3,770,349	+		CCNA_03615	0.79	-2.8
3,770,349	+		CCNA_03615	0.79	-3.7
3,770,349	+		CCNA_03615	0.79	-2.2
3,770,349	+		CCNA_03615	0.79	-2.6
3,770,349	+		CCNA_03615	0.79	-3.7
3,770,349	+		CCNA_03615	0.79	-1.8
3,770,349	+		CCNA_03615	0.79	-2.6
3,770,349	+		CCNA_03615	0.79	-2.0
3,770,349	+		CCNA_03615	0.79	-4.4
3,770,354	+		CCNA_03615	0.79	-1.2
3,770,357	-		CCNA_03615	0.80	-1.7
3,770,357	-		CCNA_03615	0.80	-2.5
3,770,357	-		CCNA_03615	0.80	-0.9
3,770,357	-		CCNA_03615	0.80	-1.6
3,770,357	-		CCNA_03615	0.80	-2.3
3,770,357	-		CCNA_03615	0.80	-1.7
3,770,357	-		CCNA_03615	0.80	-0.3
3,770,357	-		CCNA_03615	0.80	-2.5
3,770,357	-		CCNA_03615	0.80	-5.4
3,770,357	-		CCNA_03615	0.80	-3.4
3,770,357	-		CCNA_03615	0.80	-2.8
3,770,357	-		CCNA_03615	0.80	-3.0
3,770,357	-		CCNA_03615	0.80	-3.5
3,770,357	-		CCNA_03615	0.80	-3.8
3,770,357	-		CCNA_03615	0.80	-1.2
3,770,357	-		CCNA_03615	0.80	-2.5
3,770,357	-		CCNA_03615	0.80	-3.6
3,770,357	-		CCNA_03615	0.80	-3.7
3,770,357	-		CCNA_03615	0.80	-2.0
3,770,357	-		CCNA_03615	0.80	-1.8
3,770,357	-		CCNA_03615	0.80	-1.5
3,770,357	-		CCNA_03615	0.80	-1.5
3,770,357	-		CCNA_03615	0.80	+0.7
3,770,357	-		CCNA_03615	0.80	-2.5
3,770,362	-		CCNA_03615	0.80	-2.1
3,770,362	-		CCNA_03615	0.80	-2.9
3,770,380	-		CCNA_03615	0.81	+0.3
3,770,385	+		CCNA_03615	0.81	-2.8
3,770,385	+		CCNA_03615	0.81	-3.0
3,770,385	+		CCNA_03615	0.81	-3.0
3,770,390	+		CCNA_03615	0.81	-4.1
3,770,393	-		CCNA_03615	0.81	-1.2
3,770,393	-		CCNA_03615	0.81	-2.2
3,770,399	-		CCNA_03615	0.82	-0.3
3,770,466	+		CCNA_03615	0.85	-5.5
3,770,466	+		CCNA_03615	0.85	-2.4
3,770,467	-		CCNA_03615	0.85	-0.7
3,770,476	+		CCNA_03615	0.85	-1.3
3,770,484	-		CCNA_03615	0.86	-0.7
3,770,499	-		CCNA_03615	0.86	-2.1
3,770,558	-		CCNA_03615	0.89	-1.5
3,770,582	+				-2.1
3,770,619	+				-2.8
3,770,629	+				-2.9
3,770,637	+				-3.0
3,770,656	+				-3.0
3,770,658	-				-1.6
3,770,669	+				-3.0
3,770,677	-				+0.7
3,770,679	+				-1.4
3,770,684	-				-1.0
3,770,686	-				-2.4
3,770,686	-				-2.5
3,770,699	+				-1.9
3,770,699	+				-1.7
3,770,711	+				-2.5
3,770,719	-				-1.9
3,770,748	+				-1.2
3,770,748	+				-1.5
3,770,748	+				-1.9
3,770,756	-				-4.4
3,770,756	-				-2.1
3,770,770	+				-0.9
3,770,832	+				+1.7
3,770,834	-				+0.3
3,770,840	-				+0.6
3,770,877	+				-0.0
3,770,880	-				-2.0
3,770,892	+				-0.5
3,770,944	-				-0.1
3,770,961	+				+0.2
3,770,974	+				-0.6
3,770,982	-				-0.7
3,770,982	-				-0.5
3,770,984	+				+0.1
3,770,992	-		CCNA_03616	0.10	-0.8
3,771,052	-		CCNA_03616	0.15	+0.8
3,771,053	-		CCNA_03616	0.15	-1.3
3,771,067	+		CCNA_03616	0.16	+0.5
3,771,118	-		CCNA_03616	0.19	-0.9
3,771,118	-		CCNA_03616	0.19	+0.5
3,771,136	+		CCNA_03616	0.20	-0.0
3,771,146	+		CCNA_03616	0.21	+0.6
3,771,154	-		CCNA_03616	0.22	-0.7
3,771,154	-		CCNA_03616	0.22	-0.7
3,771,158	+		CCNA_03616	0.22	+0.2
3,771,158	+		CCNA_03616	0.22	+0.1
3,771,166	+		CCNA_03616	0.23	+1.1
3,771,166	-		CCNA_03616	0.23	-0.5
3,771,166	-		CCNA_03616	0.23	+1.0
3,771,167	-		CCNA_03616	0.23	-0.4
3,771,180	+		CCNA_03616	0.24	-0.2
3,771,207	+		CCNA_03616	0.25	+1.5
3,771,209	+		CCNA_03616	0.26	-0.4
3,771,217	-		CCNA_03616	0.26	-0.3
3,771,217	-		CCNA_03616	0.26	+0.3
3,771,222	-		CCNA_03616	0.27	-0.4
3,771,224	+		CCNA_03616	0.27	+0.4
3,771,234	+		CCNA_03616	0.27	+0.7
3,771,254	+		CCNA_03616	0.29	+0.9
3,771,262	+		CCNA_03616	0.29	+0.8
3,771,262	-		CCNA_03616	0.29	-1.0
3,771,262	-		CCNA_03616	0.29	-0.4
3,771,290	-		CCNA_03616	0.31	-1.2
3,771,321	+		CCNA_03616	0.34	-0.1
3,771,353	-		CCNA_03616	0.36	-0.7
3,771,413	+		CCNA_03616	0.40	-0.2
3,771,413	+		CCNA_03616	0.40	+0.5
3,771,483	+		CCNA_03616	0.45	+1.1
3,771,483	+		CCNA_03616	0.45	+0.7
3,771,483	+		CCNA_03616	0.45	+2.8
3,771,498	+		CCNA_03616	0.46	-0.3
3,771,526	+		CCNA_03616	0.48	+0.9
3,771,529	+		CCNA_03616	0.48	+0.3
3,771,532	-		CCNA_03616	0.48	-1.7
3,771,575	+		CCNA_03616	0.52	+0.2
3,771,597	+		CCNA_03616	0.53	+0.7
3,771,612	+		CCNA_03616	0.54	+0.2
3,771,613	-		CCNA_03616	0.54	-1.1
3,771,617	+		CCNA_03616	0.54	+0.0
3,771,617	+		CCNA_03616	0.54	-0.2
3,771,617	+		CCNA_03616	0.54	-0.1
3,771,617	+		CCNA_03616	0.54	+0.7
3,771,625	-		CCNA_03616	0.55	-1.0
3,771,625	-		CCNA_03616	0.55	-0.5
3,771,625	-		CCNA_03616	0.55	-0.2
3,771,625	-		CCNA_03616	0.55	-1.1
3,771,625	-		CCNA_03616	0.55	-0.1
3,771,632	+		CCNA_03616	0.56	+1.1
3,771,632	+		CCNA_03616	0.56	+0.6
3,771,632	-		CCNA_03616	0.56	+0.3
3,771,640	-		CCNA_03616	0.56	+0.2
3,771,647	+		CCNA_03616	0.57	+0.6
3,771,683	-		CCNA_03616	0.59	-0.5
3,771,698	+		CCNA_03616	0.60	+0.9
3,771,752	+		CCNA_03616	0.64	+0.3
3,771,754	-		CCNA_03616	0.64	-0.4