Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02967

Experiment: PYE 0.5x 30C survival rep1 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep1 12 days
3,121,781	+		CCNA_02965	0.64	-0.1
3,121,790	-		CCNA_02965	0.64	+0.3
3,121,798	+		CCNA_02965	0.65	-0.3
3,121,806	+		CCNA_02965	0.66	-0.2
3,121,821	-		CCNA_02965	0.67	+0.0
3,121,869	-		CCNA_02965	0.71	+0.5
3,121,952	+		CCNA_02965	0.77	-0.7
3,122,011	+		CCNA_02965	0.82	-0.2
3,122,012	+		CCNA_02965	0.82	+0.3
3,122,077	+		CCNA_02965	0.88	+0.9
3,122,103	+		CCNA_02965	0.90	-0.9
3,122,103	+		CCNA_02965	0.90	-0.9
3,122,103	+		CCNA_02965	0.90	+0.5
3,122,111	-				+1.3
3,122,125	+				-1.0
3,122,133	-				+0.5
3,122,174	+				+0.1
3,122,191	+				-0.5
3,122,243	+				+0.5
3,122,243	+				+2.5
3,122,251	-				+3.3
3,122,251	-				+1.1
3,122,251	-				+0.5
3,122,267	+				+2.5
3,122,269	+				+1.5
3,122,277	-				+1.5
3,122,349	+		CCNA_02966	0.23	+0.9
3,122,368	+		CCNA_02966	0.26	+0.5
3,122,392	+		CCNA_02966	0.31	+2.5
3,122,416	+		CCNA_02966	0.36	+1.5
3,122,424	-		CCNA_02966	0.38	+0.1
3,122,424	-		CCNA_02966	0.38	+0.5
3,122,424	-		CCNA_02966	0.38	+1.5
3,122,470	+		CCNA_02966	0.48	+2.5
3,122,470	+		CCNA_02966	0.48	+0.9
3,122,475	+		CCNA_02966	0.49	+1.3
3,122,478	-		CCNA_02966	0.49	+0.1
3,122,543	-		CCNA_02966	0.63	+2.8
3,122,547	+		CCNA_02966	0.64	+4.0
3,122,562	-		CCNA_02966	0.67	-1.0
3,122,562	-		CCNA_02966	0.67	+1.5
3,122,648	+		CCNA_02966	0.85	+2.5
3,122,684	+				+2.5
3,122,703	+				+2.5
3,122,703	+				+0.9
3,122,737	-				-2.6
3,122,754	-				+1.2
3,122,755	+				-0.1
3,122,844	+				-1.9
3,122,854	+				-0.1
3,122,854	+				+0.5
3,122,865	+				+2.5
3,122,891	+				-0.8
3,122,891	+				-1.1
3,122,899	-				-0.5
3,122,921	+				-0.6
3,122,922	-				+0.5
3,122,934	-				+0.3
3,122,960	+				-1.1
3,122,960	+				-1.1
3,122,960	+				-0.5
3,122,965	+				+0.5
3,122,968	-				-0.3
3,122,968	-				-1.2
3,122,968	-				-0.1
3,123,043	-				+0.9
3,123,063	+		CCNA_02967	0.12	-2.1
3,123,068	+		CCNA_02967	0.12	-1.4
3,123,068	+		CCNA_02967	0.12	-1.0
3,123,076	-		CCNA_02967	0.12	+0.6
3,123,076	-		CCNA_02967	0.12	-1.5
3,123,107	+		CCNA_02967	0.14	-1.9
3,123,107	+		CCNA_02967	0.14	-2.3
3,123,107	+		CCNA_02967	0.14	+1.3
3,123,107	+		CCNA_02967	0.14	-1.3
3,123,107	+		CCNA_02967	0.14	-1.5
3,123,125	+		CCNA_02967	0.14	-1.8
3,123,156	-		CCNA_02967	0.16	+1.5
3,123,177	+		CCNA_02967	0.17	-1.3
3,123,185	-		CCNA_02967	0.17	-0.5
3,123,240	+		CCNA_02967	0.19	-1.6
3,123,240	+		CCNA_02967	0.19	-2.5
3,123,246	+		CCNA_02967	0.19	+2.5
3,123,246	+		CCNA_02967	0.19	-0.7
3,123,295	-		CCNA_02967	0.21	+0.0
3,123,392	+		CCNA_02967	0.26	+0.9
3,123,415	+		CCNA_02967	0.26	-0.5
3,123,455	-		CCNA_02967	0.28	-0.3
3,123,465	-		CCNA_02967	0.29	-1.3
3,123,468	+		CCNA_02967	0.29	-1.3
3,123,483	+		CCNA_02967	0.29	-0.1
3,123,491	-		CCNA_02967	0.30	+2.5
3,123,506	+		CCNA_02967	0.30	-1.3
3,123,514	-		CCNA_02967	0.31	-0.1
3,123,514	-		CCNA_02967	0.31	-1.6
3,123,532	+		CCNA_02967	0.31	-1.1
3,123,571	-		CCNA_02967	0.33	-1.5
3,123,578	-		CCNA_02967	0.33	-0.5
3,123,600	+		CCNA_02967	0.34	-2.5
3,123,600	+		CCNA_02967	0.34	-2.3
3,123,628	+		CCNA_02967	0.35	+0.1
3,123,628	+		CCNA_02967	0.35	+0.1
3,123,636	-		CCNA_02967	0.36	+0.2
3,123,648	-		CCNA_02967	0.36	+0.0
3,123,656	+		CCNA_02967	0.36	-1.2
3,123,730	+		CCNA_02967	0.40	-0.6
3,123,731	+		CCNA_02967	0.40	+0.5
3,123,731	+		CCNA_02967	0.40	+2.0
3,123,739	-		CCNA_02967	0.40	-1.2
3,123,739	-		CCNA_02967	0.40	-0.5
3,123,743	+		CCNA_02967	0.40	-0.8
3,123,757	-		CCNA_02967	0.41	-1.4
3,123,835	+		CCNA_02967	0.44	+1.1
3,123,851	+		CCNA_02967	0.45	+0.1
3,123,889	+		CCNA_02967	0.46	-1.3
3,123,947	+		CCNA_02967	0.49	-1.4
3,123,955	-		CCNA_02967	0.49	-1.0
3,123,955	-		CCNA_02967	0.49	-1.3
3,123,965	-		CCNA_02967	0.49	-1.3
3,123,973	+		CCNA_02967	0.50	+0.5
3,123,974	+		CCNA_02967	0.50	-1.8
3,123,991	-		CCNA_02967	0.50	-1.1
3,124,023	+		CCNA_02967	0.52	+0.6
3,124,026	-		CCNA_02967	0.52	-0.5
3,124,156	+		CCNA_02967	0.57	-1.0
3,124,217	-		CCNA_02967	0.60	-1.3
3,124,217	-		CCNA_02967	0.60	+0.1
3,124,256	+		CCNA_02967	0.61	+1.1
3,124,287	-		CCNA_02967	0.63	-0.7
3,124,302	-		CCNA_02967	0.63	-0.5
3,124,342	-		CCNA_02967	0.65	-0.3
3,124,351	+		CCNA_02967	0.65	+0.2
3,124,357	+		CCNA_02967	0.66	-1.1
3,124,358	+		CCNA_02967	0.66	-0.3
3,124,367	-		CCNA_02967	0.66	-2.3
3,124,373	-		CCNA_02967	0.66	-0.6
3,124,415	+		CCNA_02967	0.68	-0.7
3,124,420	+		CCNA_02967	0.68	-1.0
3,124,428	-		CCNA_02967	0.69	+0.2
3,124,542	+		CCNA_02967	0.73	-0.4
3,124,556	-		CCNA_02967	0.74	+0.1
3,124,567	-		CCNA_02967	0.74	-0.8
3,124,569	+		CCNA_02967	0.75	-0.9
3,124,580	+		CCNA_02967	0.75	-3.0
3,124,618	+		CCNA_02967	0.77	-0.5
3,124,653	+		CCNA_02967	0.78	-1.2
3,124,653	+		CCNA_02967	0.78	-1.9
3,124,653	+		CCNA_02967	0.78	-1.0
3,124,661	-		CCNA_02967	0.78	-1.2
3,124,661	-		CCNA_02967	0.78	-1.2
3,124,661	-		CCNA_02967	0.78	-2.2
3,124,669	+		CCNA_02967	0.79	-1.2
3,124,670	+		CCNA_02967	0.79	-0.8
3,124,685	+		CCNA_02967	0.79	-0.3
3,124,698	+		CCNA_02967	0.80	-1.2
3,124,706	-		CCNA_02967	0.80	-2.5
3,124,737	+		CCNA_02967	0.82	-1.1
3,124,799	+		CCNA_02967	0.84	-1.6
3,124,837	+		CCNA_02967	0.86	-0.9
3,124,872	+		CCNA_02967	0.87	-1.8
3,124,877	+		CCNA_02967	0.87	-0.7
3,124,887	+		CCNA_02967	0.88	-1.8
3,124,931	+		CCNA_02967	0.90	-0.7
3,124,951	-				+0.1
3,124,967	+				-0.4
3,124,967	+				-0.7
3,124,970	-				-0.7
3,125,004	+				-2.3
3,125,004	+				-0.7
3,125,012	-				-1.3
3,125,051	+				-2.1
3,125,067	-				-2.0
3,125,074	-				-0.5
3,125,081	+				+0.5
3,125,081	+				-0.1
3,125,083	-				+2.5
3,125,089	-				-0.8
3,125,150	-				-0.1
3,125,153	+				-1.8
3,125,171	-				+0.7
3,125,195	-				+0.7
3,125,244	-				-2.0
3,125,326	+		CCNA_03902	0.26	-1.8
3,125,328	+		CCNA_03902	0.27	-0.4
3,125,334	-		CCNA_03902	0.29	+0.7
3,125,334	-		CCNA_03902	0.29	+0.1
3,125,351	+		CCNA_03902	0.34	-0.6
3,125,351	+		CCNA_03902	0.34	-0.0
3,125,351	+		CCNA_03902	0.34	+0.5
3,125,351	+		CCNA_03902	0.34	-0.7
3,125,352	+				+2.5
3,125,359	-		CCNA_03902	0.36	-2.1
3,125,397	+		CCNA_03902	0.47	-0.1
3,125,408	+		CCNA_03902	0.51	+0.0
3,125,433	+		CCNA_03902	0.58	-0.3
3,125,448	+		CCNA_03902	0.62	-1.6
3,125,451	-		CCNA_03902	0.63	-0.8
3,125,451	-		CCNA_03902	0.63	-0.0
3,125,521	-		CCNA_03902	0.84	+0.6
3,125,523	+		CCNA_03902	0.85	+0.4
3,125,524	-		CCNA_03902	0.85	+0.5
3,125,539	+		CCNA_03902	0.90	-0.4
3,125,544	+				+0.1
3,125,558	+				+0.0
3,125,607	+				-0.3
3,125,648	+		CCNA_03883	0.19	-2.7
3,125,668	-		CCNA_03883	0.24	+0.6
3,125,668	-		CCNA_03883	0.24	-0.7
3,125,760	+		CCNA_03883	0.46	+0.1
3,125,775	+		CCNA_03883	0.49	-0.4
3,125,823	-		CCNA_03883	0.61	+0.7
3,125,845	+		CCNA_03883	0.66	+1.2
3,125,848	-		CCNA_03883	0.67	-0.1
3,125,853	-		CCNA_03883	0.68	+0.9
3,125,853	-		CCNA_03883	0.68	-0.0
3,125,880	+		CCNA_03883	0.74	+1.7
3,125,893	+		CCNA_03883	0.77	-1.0
3,125,898	+		CCNA_03883	0.79	-1.7
3,125,906	-		CCNA_03883	0.81	-0.3
3,125,939	+		CCNA_03883	0.88	+0.9
3,125,939	+		CCNA_03883	0.88	+0.0
3,125,939	+		CCNA_03883	0.88	-0.3
3,125,939	+		CCNA_03883	0.88	-0.3
3,125,939	+		CCNA_03883	0.88	+0.5
3,125,939	+		CCNA_03883	0.88	-1.0
3,125,939	+		CCNA_03883	0.88	-0.3
3,125,939	+		CCNA_03883	0.88	-2.2
3,125,939	+		CCNA_03883	0.88	+0.1
3,125,947	-				-1.2
3,125,947	-				+1.1
3,125,947	-				-1.3
3,125,947	-				-0.1
3,125,947	-				-1.2
3,126,052	+				-2.1
3,126,100	+				+0.6
3,126,121	+		CCNA_02969	0.12	-1.1
3,126,129	-		CCNA_02969	0.13	+0.9