Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14385 and BWI76_RS14390 overlap by 17 nucleotides BWI76_RS14390 and BWI76_RS14395 are separated by 517 nucleotides BWI76_RS14395 and BWI76_RS14400 are separated by 110 nucleotides
BWI76_RS14385: BWI76_RS14385 - hypothetical protein, at 3,005,453 to 3,007,003
_RS14385
BWI76_RS14390: BWI76_RS14390 - hypothetical protein, at 3,006,987 to 3,007,862
_RS14390
BWI76_RS14395: BWI76_RS14395 - hypothetical protein, at 3,008,380 to 3,008,517
_RS14395
BWI76_RS14400: BWI76_RS14400 - ISNCY family transposase, at 3,008,628 to 3,009,198
_RS14400
Position (kb)
3006
3007
3008 Strain fitness (log2 ratio)
-2
-1
0
1 at 3005.998 kb on + strand, within BWI76_RS14385 at 3006.006 kb on - strand, within BWI76_RS14385 at 3006.146 kb on - strand, within BWI76_RS14385 at 3006.164 kb on + strand at 3006.242 kb on + strand, within BWI76_RS14385 at 3006.350 kb on - strand, within BWI76_RS14385 at 3006.356 kb on - strand, within BWI76_RS14385 at 3006.366 kb on - strand, within BWI76_RS14385 at 3006.403 kb on - strand, within BWI76_RS14385 at 3006.480 kb on - strand, within BWI76_RS14385 at 3006.571 kb on + strand, within BWI76_RS14385 at 3006.658 kb on + strand, within BWI76_RS14385 at 3006.792 kb on + strand, within BWI76_RS14385 at 3006.799 kb on - strand, within BWI76_RS14385 at 3007.025 kb on + strand at 3007.224 kb on - strand at 3007.224 kb on - strand, within BWI76_RS14390 at 3007.224 kb on - strand, within BWI76_RS14390 at 3007.860 kb on + strand at 3008.043 kb on + strand at 3008.043 kb on + strand at 3008.045 kb on + strand at 3008.045 kb on + strand at 3008.077 kb on - strand at 3008.160 kb on - strand at 3008.247 kb on + strand at 3008.260 kb on + strand at 3008.260 kb on + strand at 3008.605 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 3,005,998 + BWI76_RS14385 0.35 -1.5 3,006,006 - BWI76_RS14385 0.36 -0.5 3,006,146 - BWI76_RS14385 0.45 -1.2 3,006,164 + -0.6 3,006,242 + BWI76_RS14385 0.51 +0.6 3,006,350 - BWI76_RS14385 0.58 +1.1 3,006,356 - BWI76_RS14385 0.58 -0.9 3,006,366 - BWI76_RS14385 0.59 +0.2 3,006,403 - BWI76_RS14385 0.61 -0.8 3,006,480 - BWI76_RS14385 0.66 +0.0 3,006,571 + BWI76_RS14385 0.72 -0.1 3,006,658 + BWI76_RS14385 0.78 +0.6 3,006,792 + BWI76_RS14385 0.86 -0.9 3,006,799 - BWI76_RS14385 0.87 -0.1 3,007,025 + +0.7 3,007,224 - +0.7 3,007,224 - BWI76_RS14390 0.27 -0.8 3,007,224 - BWI76_RS14390 0.27 -1.2 3,007,860 + -1.3 3,008,043 + +1.2 3,008,043 + +0.2 3,008,045 + -0.2 3,008,045 + -0.3 3,008,077 - -2.0 3,008,160 - +0.4 3,008,247 + -0.7 3,008,260 + +0.7 3,008,260 + -0.7 3,008,605 - -1.3
Or see this region's nucleotide sequence