Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13240 and BWI76_RS13245 are separated by 318 nucleotides BWI76_RS13245 and BWI76_RS13250 are separated by 225 nucleotides BWI76_RS13250 and BWI76_RS13255 are separated by 169 nucleotides BWI76_RS13255 and BWI76_RS13260 are separated by 22 nucleotides
BWI76_RS13240: BWI76_RS13240 - hypothetical protein, at 2,762,639 to 2,762,836
_RS13240
BWI76_RS13245: BWI76_RS13245 - DNA-damage-inducible protein I, at 2,763,155 to 2,763,397
_RS13245
BWI76_RS13250: BWI76_RS13250 - cytochrome b561, at 2,763,623 to 2,764,150
_RS13250
BWI76_RS13255: BWI76_RS13255 - hypothetical protein, at 2,764,320 to 2,764,595
_RS13255
BWI76_RS13260: BWI76_RS13260 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 2,764,618 to 2,765,736
_RS13260
Position (kb)
2763
2764
2765 Strain fitness (log2 ratio)
-1
0
1 at 2762.757 kb on - strand, within BWI76_RS13240 at 2763.340 kb on + strand, within BWI76_RS13245 at 2763.350 kb on + strand, within BWI76_RS13245 at 2763.465 kb on - strand at 2763.471 kb on - strand at 2763.472 kb on - strand at 2763.518 kb on - strand at 2763.518 kb on - strand at 2763.838 kb on + strand, within BWI76_RS13250 at 2764.748 kb on + strand, within BWI76_RS13260 at 2764.756 kb on - strand, within BWI76_RS13260 at 2764.792 kb on + strand, within BWI76_RS13260
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,762,757 - BWI76_RS13240 0.60 -0.1 2,763,340 + BWI76_RS13245 0.76 -0.2 2,763,350 + BWI76_RS13245 0.80 -0.5 2,763,465 - +0.1 2,763,471 - -0.2 2,763,472 - +0.0 2,763,518 - +0.5 2,763,518 - +0.4 2,763,838 + BWI76_RS13250 0.41 -1.1 2,764,748 + BWI76_RS13260 0.12 -0.0 2,764,756 - BWI76_RS13260 0.12 +1.1 2,764,792 + BWI76_RS13260 0.16 -0.5
Or see this region's nucleotide sequence