Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08675

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08665 and BWI76_RS08670 are separated by 60 nucleotidesBWI76_RS08670 and BWI76_RS08675 are separated by 134 nucleotidesBWI76_RS08675 and BWI76_RS08680 are separated by 233 nucleotidesBWI76_RS08680 and BWI76_RS08685 are separated by 54 nucleotidesBWI76_RS08685 and BWI76_RS08690 are separated by 118 nucleotides BWI76_RS08665: BWI76_RS08665 - 6-phosphogluconolactonase, at 1,826,887 to 1,827,882 _RS08665 BWI76_RS08670: BWI76_RS08670 - N-acetyltransferase, at 1,827,943 to 1,828,419 _RS08670 BWI76_RS08675: BWI76_RS08675 - GntR family transcriptional regulator, at 1,828,554 to 1,830,023 _RS08675 BWI76_RS08680: BWI76_RS08680 - hypothetical protein, at 1,830,257 to 1,830,523 _RS08680 BWI76_RS08685: BWI76_RS08685 - hypothetical protein, at 1,830,578 to 1,830,901 _RS08685 BWI76_RS08690: BWI76_RS08690 - hypothetical protein, at 1,831,020 to 1,831,265 _RS08690 Position (kb) 1828 1829 1830 1831Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1827.612 kb on + strand, within BWI76_RS08665at 1827.730 kb on - strand, within BWI76_RS08665at 1827.779 kb on + strand, within BWI76_RS08665at 1828.018 kb on - strand, within BWI76_RS08670at 1828.042 kb on - strand, within BWI76_RS08670at 1828.240 kb on - strand, within BWI76_RS08670at 1828.240 kb on - strand, within BWI76_RS08670at 1828.298 kb on - strand, within BWI76_RS08670at 1828.450 kb on + strandat 1828.450 kb on + strandat 1828.614 kb on + strandat 1828.632 kb on - strandat 1828.642 kb on - strandat 1828.705 kb on - strand, within BWI76_RS08675at 1828.755 kb on + strand, within BWI76_RS08675at 1828.885 kb on + strand, within BWI76_RS08675at 1829.017 kb on - strand, within BWI76_RS08675at 1829.069 kb on - strand, within BWI76_RS08675at 1829.127 kb on - strand, within BWI76_RS08675at 1829.182 kb on - strand, within BWI76_RS08675at 1829.276 kb on + strand, within BWI76_RS08675at 1829.351 kb on + strand, within BWI76_RS08675at 1829.359 kb on - strand, within BWI76_RS08675at 1829.359 kb on - strand, within BWI76_RS08675at 1829.392 kb on + strand, within BWI76_RS08675at 1829.400 kb on - strand, within BWI76_RS08675at 1829.418 kb on - strand, within BWI76_RS08675at 1829.505 kb on - strand, within BWI76_RS08675at 1829.505 kb on - strandat 1829.519 kb on + strand, within BWI76_RS08675at 1829.662 kb on + strand, within BWI76_RS08675at 1829.670 kb on - strand, within BWI76_RS08675at 1829.703 kb on + strand, within BWI76_RS08675at 1829.832 kb on - strand, within BWI76_RS08675at 1829.866 kb on - strand, within BWI76_RS08675at 1829.880 kb on - strandat 1829.893 kb on + strandat 1829.893 kb on + strandat 1829.908 kb on + strandat 1829.974 kb on + strandat 1829.977 kb on - strandat 1829.982 kb on + strandat 1829.989 kb on - strandat 1830.008 kb on + strandat 1830.015 kb on + strandat 1830.016 kb on - strandat 1830.021 kb on - strandat 1830.026 kb on - strandat 1830.038 kb on - strandat 1830.056 kb on + strandat 1830.074 kb on + strandat 1830.126 kb on + strandat 1830.175 kb on - strandat 1830.233 kb on + strandat 1830.233 kb on + strandat 1830.233 kb on + strandat 1830.233 kb on + strandat 1830.233 kb on + strandat 1830.233 kb on + strandat 1830.241 kb on - strandat 1830.241 kb on - strandat 1830.241 kb on - strandat 1830.241 kb on - strandat 1830.241 kb on - strandat 1830.241 kb on - strandat 1830.241 kb on - strandat 1830.241 kb on - strandat 1830.279 kb on - strandat 1830.310 kb on + strand, within BWI76_RS08680at 1830.318 kb on - strand, within BWI76_RS08680at 1830.318 kb on - strand, within BWI76_RS08680at 1830.318 kb on - strand, within BWI76_RS08680at 1830.318 kb on - strand, within BWI76_RS08680at 1830.318 kb on - strand, within BWI76_RS08680at 1830.318 kb on - strand, within BWI76_RS08680at 1830.318 kb on - strand, within BWI76_RS08680at 1830.343 kb on - strand, within BWI76_RS08680at 1830.385 kb on - strand, within BWI76_RS08680at 1830.385 kb on - strand, within BWI76_RS08680at 1830.395 kb on + strand, within BWI76_RS08680at 1830.395 kb on + strand, within BWI76_RS08680at 1830.395 kb on - strand, within BWI76_RS08680at 1830.400 kb on + strand, within BWI76_RS08680at 1830.403 kb on - strand, within BWI76_RS08680at 1830.468 kb on + strand, within BWI76_RS08680at 1830.488 kb on + strand, within BWI76_RS08680at 1830.488 kb on + strand, within BWI76_RS08680at 1830.496 kb on - strand, within BWI76_RS08680at 1830.496 kb on - strand, within BWI76_RS08680at 1830.496 kb on - strand, within BWI76_RS08680at 1830.496 kb on - strand, within BWI76_RS08680at 1830.496 kb on - strand, within BWI76_RS08680at 1830.517 kb on + strandat 1830.519 kb on + strandat 1830.527 kb on - strandat 1830.532 kb on - strandat 1830.547 kb on - strandat 1830.584 kb on - strandat 1830.661 kb on - strand, within BWI76_RS08685at 1830.696 kb on - strand, within BWI76_RS08685at 1830.696 kb on - strand, within BWI76_RS08685at 1830.696 kb on - strand, within BWI76_RS08685at 1830.696 kb on - strand, within BWI76_RS08685at 1830.696 kb on - strand, within BWI76_RS08685at 1830.696 kb on - strand, within BWI76_RS08685at 1830.696 kb on - strand, within BWI76_RS08685at 1830.696 kb on - strand, within BWI76_RS08685at 1830.704 kb on - strand, within BWI76_RS08685at 1830.729 kb on - strand, within BWI76_RS08685at 1830.730 kb on - strand, within BWI76_RS08685at 1830.730 kb on - strand, within BWI76_RS08685at 1830.730 kb on - strand, within BWI76_RS08685at 1830.730 kb on - strand, within BWI76_RS08685at 1830.730 kb on - strand, within BWI76_RS08685at 1830.753 kb on + strand, within BWI76_RS08685at 1830.761 kb on - strand, within BWI76_RS08685at 1830.766 kb on - strand, within BWI76_RS08685at 1830.766 kb on - strand, within BWI76_RS08685at 1830.767 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.768 kb on + strand, within BWI76_RS08685at 1830.772 kb on + strand, within BWI76_RS08685at 1830.775 kb on - strand, within BWI76_RS08685at 1830.775 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.776 kb on - strand, within BWI76_RS08685at 1830.780 kb on - strand, within BWI76_RS08685at 1830.782 kb on + strand, within BWI76_RS08685at 1830.798 kb on + strand, within BWI76_RS08685at 1830.806 kb on - strand, within BWI76_RS08685at 1830.806 kb on - strand, within BWI76_RS08685at 1830.823 kb on + strand, within BWI76_RS08685at 1830.824 kb on + strand, within BWI76_RS08685at 1830.824 kb on + strand, within BWI76_RS08685at 1830.832 kb on - strand, within BWI76_RS08685at 1830.832 kb on - strand, within BWI76_RS08685at 1830.832 kb on - strand, within BWI76_RS08685at 1830.832 kb on - strand, within BWI76_RS08685at 1830.845 kb on + strand, within BWI76_RS08685at 1830.878 kb on + strandat 1830.878 kb on + strandat 1830.886 kb on - strandat 1830.886 kb on - strandat 1830.886 kb on - strandat 1830.894 kb on - strandat 1830.935 kb on + strandat 1830.960 kb on - strandat 1830.996 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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1,827,612 + BWI76_RS08665 0.73 -0.5
1,827,730 - BWI76_RS08665 0.85 +0.2
1,827,779 + BWI76_RS08665 0.90 +0.5
1,828,018 - BWI76_RS08670 0.16 +0.3
1,828,042 - BWI76_RS08670 0.21 +0.1
1,828,240 - BWI76_RS08670 0.62 -0.1
1,828,240 - BWI76_RS08670 0.62 +0.8
1,828,298 - BWI76_RS08670 0.74 +0.6
1,828,450 + +0.2
1,828,450 + +0.9
1,828,614 + +0.6
1,828,632 - +0.3
1,828,642 - -0.2
1,828,705 - BWI76_RS08675 0.10 +1.0
1,828,755 + BWI76_RS08675 0.14 -0.2
1,828,885 + BWI76_RS08675 0.23 -0.9
1,829,017 - BWI76_RS08675 0.31 +0.4
1,829,069 - BWI76_RS08675 0.35 -0.9
1,829,127 - BWI76_RS08675 0.39 -0.3
1,829,182 - BWI76_RS08675 0.43 +0.8
1,829,276 + BWI76_RS08675 0.49 +0.3
1,829,351 + BWI76_RS08675 0.54 -0.4
1,829,359 - BWI76_RS08675 0.55 -0.1
1,829,359 - BWI76_RS08675 0.55 -0.6
1,829,392 + BWI76_RS08675 0.57 +1.9
1,829,400 - BWI76_RS08675 0.58 -0.5
1,829,418 - BWI76_RS08675 0.59 -1.8
1,829,505 - BWI76_RS08675 0.65 +0.2
1,829,505 - +0.3
1,829,519 + BWI76_RS08675 0.66 +0.2
1,829,662 + BWI76_RS08675 0.75 +0.8
1,829,670 - BWI76_RS08675 0.76 +0.7
1,829,703 + BWI76_RS08675 0.78 +0.2
1,829,832 - BWI76_RS08675 0.87 +0.7
1,829,866 - BWI76_RS08675 0.89 +0.6
1,829,880 - -0.2
1,829,893 + -0.2
1,829,893 + -0.3
1,829,908 + +0.2
1,829,974 + +0.7
1,829,977 - +2.3
1,829,982 + -0.1
1,829,989 - -0.4
1,830,008 + -0.6
1,830,015 + -0.7
1,830,016 - +0.1
1,830,021 - -0.2
1,830,026 - -0.1
1,830,038 - -0.3
1,830,056 + -0.8
1,830,074 + -0.1
1,830,126 + -0.9
1,830,175 - -0.9
1,830,233 + -0.0
1,830,233 + +0.0
1,830,233 + +0.5
1,830,233 + +1.9
1,830,233 + +0.1
1,830,233 + +0.9
1,830,241 - +0.3
1,830,241 - -0.6
1,830,241 - -0.2
1,830,241 - -0.0
1,830,241 - -0.3
1,830,241 - +0.0
1,830,241 - +0.1
1,830,241 - -1.1
1,830,279 - +0.0
1,830,310 + BWI76_RS08680 0.20 -1.4
1,830,318 - BWI76_RS08680 0.23 -0.2
1,830,318 - BWI76_RS08680 0.23 +1.5
1,830,318 - BWI76_RS08680 0.23 +0.9
1,830,318 - BWI76_RS08680 0.23 -0.4
1,830,318 - BWI76_RS08680 0.23 +0.5
1,830,318 - BWI76_RS08680 0.23 +1.1
1,830,318 - BWI76_RS08680 0.23 +0.6
1,830,343 - BWI76_RS08680 0.32 -0.4
1,830,385 - BWI76_RS08680 0.48 +0.8
1,830,385 - BWI76_RS08680 0.48 +0.4
1,830,395 + BWI76_RS08680 0.52 -0.7
1,830,395 + BWI76_RS08680 0.52 +0.1
1,830,395 - BWI76_RS08680 0.52 -0.6
1,830,400 + BWI76_RS08680 0.54 -0.1
1,830,403 - BWI76_RS08680 0.55 -1.7
1,830,468 + BWI76_RS08680 0.79 +0.2
1,830,488 + BWI76_RS08680 0.87 +0.9
1,830,488 + BWI76_RS08680 0.87 -0.2
1,830,496 - BWI76_RS08680 0.90 -1.6
1,830,496 - BWI76_RS08680 0.90 -0.1
1,830,496 - BWI76_RS08680 0.90 +0.1
1,830,496 - BWI76_RS08680 0.90 +0.0
1,830,496 - BWI76_RS08680 0.90 -0.7
1,830,517 + -0.4
1,830,519 + -0.5
1,830,527 - +0.1
1,830,532 - -0.2
1,830,547 - +0.7
1,830,584 - -1.5
1,830,661 - BWI76_RS08685 0.26 -1.6
1,830,696 - BWI76_RS08685 0.36 -0.1
1,830,696 - BWI76_RS08685 0.36 -0.2
1,830,696 - BWI76_RS08685 0.36 +0.6
1,830,696 - BWI76_RS08685 0.36 -0.8
1,830,696 - BWI76_RS08685 0.36 -0.1
1,830,696 - BWI76_RS08685 0.36 -0.2
1,830,696 - BWI76_RS08685 0.36 +0.5
1,830,696 - BWI76_RS08685 0.36 +0.1
1,830,704 - BWI76_RS08685 0.39 +0.2
1,830,729 - BWI76_RS08685 0.47 +0.4
1,830,730 - BWI76_RS08685 0.47 +0.2
1,830,730 - BWI76_RS08685 0.47 +1.9
1,830,730 - BWI76_RS08685 0.47 -0.4
1,830,730 - BWI76_RS08685 0.47 -0.5
1,830,730 - BWI76_RS08685 0.47 +0.2
1,830,753 + BWI76_RS08685 0.54 +1.7
1,830,761 - BWI76_RS08685 0.56 +0.1
1,830,766 - BWI76_RS08685 0.58 +0.3
1,830,766 - BWI76_RS08685 0.58 -0.4
1,830,767 + BWI76_RS08685 0.58 -0.3
1,830,768 + BWI76_RS08685 0.59 -1.1
1,830,768 + BWI76_RS08685 0.59 -0.3
1,830,768 + BWI76_RS08685 0.59 -2.7
1,830,768 + BWI76_RS08685 0.59 -0.0
1,830,768 + BWI76_RS08685 0.59 +0.9
1,830,768 + BWI76_RS08685 0.59 -0.2
1,830,768 + BWI76_RS08685 0.59 +0.9
1,830,768 + BWI76_RS08685 0.59 +0.2
1,830,768 + BWI76_RS08685 0.59 -0.4
1,830,768 + BWI76_RS08685 0.59 -0.1
1,830,768 + BWI76_RS08685 0.59 -1.2
1,830,768 + BWI76_RS08685 0.59 -0.0
1,830,768 + BWI76_RS08685 0.59 -1.3
1,830,768 + BWI76_RS08685 0.59 -0.7
1,830,768 + BWI76_RS08685 0.59 -1.4
1,830,768 + BWI76_RS08685 0.59 -1.4
1,830,768 + BWI76_RS08685 0.59 -0.3
1,830,768 + BWI76_RS08685 0.59 +2.6
1,830,768 + BWI76_RS08685 0.59 -0.2
1,830,768 + BWI76_RS08685 0.59 -0.1
1,830,768 + BWI76_RS08685 0.59 -0.7
1,830,768 + BWI76_RS08685 0.59 +2.2
1,830,768 + BWI76_RS08685 0.59 +0.9
1,830,768 + BWI76_RS08685 0.59 +0.3
1,830,768 + BWI76_RS08685 0.59 +0.2
1,830,768 + BWI76_RS08685 0.59 -0.5
1,830,768 + BWI76_RS08685 0.59 +1.9
1,830,768 + BWI76_RS08685 0.59 -1.6
1,830,768 + BWI76_RS08685 0.59 +0.2
1,830,768 + BWI76_RS08685 0.59 +0.5
1,830,768 + BWI76_RS08685 0.59 -0.2
1,830,772 + BWI76_RS08685 0.60 +1.3
1,830,775 - BWI76_RS08685 0.61 -0.1
1,830,775 - BWI76_RS08685 0.61 -0.8
1,830,776 - BWI76_RS08685 0.61 -0.1
1,830,776 - BWI76_RS08685 0.61 -0.5
1,830,776 - BWI76_RS08685 0.61 +0.3
1,830,776 - BWI76_RS08685 0.61 +1.5
1,830,776 - BWI76_RS08685 0.61 -1.7
1,830,776 - BWI76_RS08685 0.61 -0.2
1,830,776 - BWI76_RS08685 0.61 -0.7
1,830,776 - BWI76_RS08685 0.61 -1.4
1,830,776 - BWI76_RS08685 0.61 -0.1
1,830,776 - BWI76_RS08685 0.61 +1.0
1,830,776 - BWI76_RS08685 0.61 -0.1
1,830,776 - BWI76_RS08685 0.61 -0.4
1,830,776 - BWI76_RS08685 0.61 +0.9
1,830,776 - BWI76_RS08685 0.61 +0.5
1,830,776 - BWI76_RS08685 0.61 -0.6
1,830,776 - BWI76_RS08685 0.61 -0.1
1,830,776 - BWI76_RS08685 0.61 +0.3
1,830,776 - BWI76_RS08685 0.61 -0.5
1,830,776 - BWI76_RS08685 0.61 +0.2
1,830,776 - BWI76_RS08685 0.61 -0.7
1,830,776 - BWI76_RS08685 0.61 +0.5
1,830,776 - BWI76_RS08685 0.61 -0.1
1,830,776 - BWI76_RS08685 0.61 +0.1
1,830,776 - BWI76_RS08685 0.61 -1.2
1,830,776 - BWI76_RS08685 0.61 +0.4
1,830,776 - BWI76_RS08685 0.61 +0.3
1,830,776 - BWI76_RS08685 0.61 +2.4
1,830,776 - BWI76_RS08685 0.61 -1.6
1,830,776 - BWI76_RS08685 0.61 -0.7
1,830,776 - BWI76_RS08685 0.61 -0.5
1,830,776 - BWI76_RS08685 0.61 -1.7
1,830,776 - BWI76_RS08685 0.61 +1.1
1,830,776 - BWI76_RS08685 0.61 -0.6
1,830,776 - BWI76_RS08685 0.61 -1.5
1,830,776 - BWI76_RS08685 0.61 +0.3
1,830,776 - BWI76_RS08685 0.61 -0.4
1,830,780 - BWI76_RS08685 0.62 +0.4
1,830,782 + BWI76_RS08685 0.63 +0.3
1,830,798 + BWI76_RS08685 0.68 +0.3
1,830,806 - BWI76_RS08685 0.70 +1.0
1,830,806 - BWI76_RS08685 0.70 -0.8
1,830,823 + BWI76_RS08685 0.76 +2.3
1,830,824 + BWI76_RS08685 0.76 +0.7
1,830,824 + BWI76_RS08685 0.76 -0.9
1,830,832 - BWI76_RS08685 0.78 -2.8
1,830,832 - BWI76_RS08685 0.78 +0.7
1,830,832 - BWI76_RS08685 0.78 -1.0
1,830,832 - BWI76_RS08685 0.78 +0.2
1,830,845 + BWI76_RS08685 0.82 -0.7
1,830,878 + +0.5
1,830,878 + +1.9
1,830,886 - +1.9
1,830,886 - +0.6
1,830,886 - +0.6
1,830,894 - -0.9
1,830,935 + -0.7
1,830,960 - -0.2
1,830,996 - +1.2

Or see this region's nucleotide sequence