Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_907 and HP15_908 are separated by 62 nucleotides HP15_908 and HP15_909 are separated by 33 nucleotides HP15_909 and HP15_910 are separated by 27 nucleotides HP15_910 and HP15_911 are separated by 3 nucleotides
HP15_907: HP15_907 - acyl-CoA dehydrogenase domain protein, at 919,118 to 920,284
_907
HP15_908: HP15_908 - enoyl-CoA hydratase/isomerase, at 920,347 to 921,126
_908
HP15_909: HP15_909 - enoyl-CoA hydratase/isomerase family protein, at 921,160 to 922,230
_909
HP15_910: HP15_910 - 3-hydroxyisobutyrate dehydrogenase, at 922,258 to 923,145
_910
HP15_911: HP15_911 - conserved hypothetical protein, at 923,149 to 923,481
_911
Position (kb) 921
922
923 Strain fitness (log2 ratio) -1
0
1
2 at 920.609 kb on + strand, within HP15_908 at 920.763 kb on - strand, within HP15_908 at 921.160 kb on - strand at 921.297 kb on + strand, within HP15_909 at 921.385 kb on - strand, within HP15_909 at 921.390 kb on - strand, within HP15_909 at 921.511 kb on + strand, within HP15_909 at 921.616 kb on - strand, within HP15_909 at 921.688 kb on - strand, within HP15_909 at 921.761 kb on + strand, within HP15_909 at 921.818 kb on - strand, within HP15_909 at 921.818 kb on - strand, within HP15_909 at 921.818 kb on - strand, within HP15_909 at 921.925 kb on - strand, within HP15_909 at 921.925 kb on - strand, within HP15_909 at 921.949 kb on - strand, within HP15_909 at 922.353 kb on + strand, within HP15_910 at 922.496 kb on - strand, within HP15_910 at 922.647 kb on - strand, within HP15_910 at 922.673 kb on + strand, within HP15_910 at 922.940 kb on - strand, within HP15_910 at 922.996 kb on + strand, within HP15_910 at 923.078 kb on - strand at 923.089 kb on - strand at 923.100 kb on - strand at 923.130 kb on + strand at 923.130 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 920,609 + HP15_908 0.34 -0.1 920,763 - HP15_908 0.53 +0.1 921,160 - +0.7 921,297 + HP15_909 0.13 +1.5 921,385 - HP15_909 0.21 +0.3 921,390 - HP15_909 0.21 -0.3 921,511 + HP15_909 0.33 +0.9 921,616 - HP15_909 0.43 +2.4 921,688 - HP15_909 0.49 +0.4 921,761 + HP15_909 0.56 +0.6 921,818 - HP15_909 0.61 -0.0 921,818 - HP15_909 0.61 +1.5 921,818 - HP15_909 0.61 +0.7 921,925 - HP15_909 0.71 +1.8 921,925 - HP15_909 0.71 -0.2 921,949 - HP15_909 0.74 +0.5 922,353 + HP15_910 0.11 -0.9 922,496 - HP15_910 0.27 -1.7 922,647 - HP15_910 0.44 -0.2 922,673 + HP15_910 0.47 -1.3 922,940 - HP15_910 0.77 +0.6 922,996 + HP15_910 0.83 -1.3 923,078 - -1.0 923,089 - +0.2 923,100 - +1.2 923,130 + -0.1 923,130 + +0.1
Or see this region's nucleotide sequence