Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_739 and HP15_740 are separated by 114 nucleotides HP15_740 and HP15_741 are separated by 226 nucleotides HP15_741 and HP15_742 are separated by 127 nucleotides
HP15_739: HP15_739 - glycosyl transferase, group 1 family protein, at 746,970 to 748,190
_739
HP15_740: HP15_740 - oxidoreductase Tas, aldo/keto reductase family protein, at 748,305 to 749,342
_740
HP15_741: HP15_741 - DNA polymerase IV-like protein, at 749,569 to 749,892
_741
HP15_742: HP15_742 - acetyl-CoA hydrolase, at 750,020 to 752,230
_742
Position (kb) 748
749
750 Strain fitness (log2 ratio) -2
-1
0
1
2 at 747.558 kb on - strand, within HP15_739 at 747.595 kb on - strand, within HP15_739 at 747.611 kb on - strand, within HP15_739 at 747.913 kb on + strand, within HP15_739 at 747.931 kb on - strand, within HP15_739 at 748.009 kb on - strand, within HP15_739 at 748.029 kb on + strand, within HP15_739 at 748.051 kb on - strand, within HP15_739 at 748.051 kb on - strand, within HP15_739 at 748.099 kb on - strand at 748.201 kb on - strand at 748.214 kb on - strand at 748.339 kb on + strand at 748.385 kb on - strand at 748.385 kb on - strand at 748.399 kb on + strand at 748.420 kb on - strand, within HP15_740 at 748.439 kb on - strand, within HP15_740 at 748.465 kb on - strand, within HP15_740 at 748.465 kb on - strand, within HP15_740 at 748.465 kb on - strand, within HP15_740 at 748.486 kb on + strand, within HP15_740 at 748.497 kb on + strand, within HP15_740 at 748.661 kb on + strand, within HP15_740 at 748.666 kb on + strand, within HP15_740 at 748.699 kb on + strand, within HP15_740 at 748.980 kb on - strand, within HP15_740 at 749.073 kb on - strand, within HP15_740 at 749.121 kb on + strand, within HP15_740 at 749.201 kb on - strand, within HP15_740 at 749.219 kb on + strand, within HP15_740 at 749.281 kb on + strand at 749.289 kb on - strand at 749.373 kb on + strand at 749.405 kb on - strand at 749.480 kb on + strand at 749.590 kb on + strand at 749.714 kb on - strand, within HP15_741 at 749.740 kb on - strand, within HP15_741 at 749.771 kb on + strand, within HP15_741 at 749.779 kb on - strand, within HP15_741 at 749.779 kb on - strand, within HP15_741 at 749.853 kb on + strand, within HP15_741 at 749.886 kb on + strand at 749.894 kb on - strand at 749.894 kb on - strand at 750.293 kb on + strand, within HP15_742
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 747,558 - HP15_739 0.48 -0.2 747,595 - HP15_739 0.51 -0.2 747,611 - HP15_739 0.52 -0.8 747,913 + HP15_739 0.77 -0.1 747,931 - HP15_739 0.79 -0.2 748,009 - HP15_739 0.85 -0.6 748,029 + HP15_739 0.87 -2.0 748,051 - HP15_739 0.89 +0.5 748,051 - HP15_739 0.89 -0.2 748,099 - -1.3 748,201 - -0.9 748,214 - +0.4 748,339 + +0.1 748,385 - -1.5 748,385 - +1.5 748,399 + +0.0 748,420 - HP15_740 0.11 -0.1 748,439 - HP15_740 0.13 -1.8 748,465 - HP15_740 0.15 +1.0 748,465 - HP15_740 0.15 +0.9 748,465 - HP15_740 0.15 -0.5 748,486 + HP15_740 0.17 +0.2 748,497 + HP15_740 0.18 +0.0 748,661 + HP15_740 0.34 +0.4 748,666 + HP15_740 0.35 +0.4 748,699 + HP15_740 0.38 +1.1 748,980 - HP15_740 0.65 +0.2 749,073 - HP15_740 0.74 +0.3 749,121 + HP15_740 0.79 +0.0 749,201 - HP15_740 0.86 +0.0 749,219 + HP15_740 0.88 -0.4 749,281 + +0.0 749,289 - +0.6 749,373 + -0.1 749,405 - -0.3 749,480 + +0.6 749,590 + +1.9 749,714 - HP15_741 0.45 -0.2 749,740 - HP15_741 0.53 -2.0 749,771 + HP15_741 0.62 +0.1 749,779 - HP15_741 0.65 +1.1 749,779 - HP15_741 0.65 +0.0 749,853 + HP15_741 0.88 +1.0 749,886 + -0.1 749,894 - -0.2 749,894 - -2.0 750,293 + HP15_742 0.12 +0.4
Or see this region's nucleotide sequence