Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_661 and HP15_662 are separated by 2 nucleotides HP15_662 and HP15_663 overlap by 8 nucleotides HP15_663 and HP15_664 overlap by 1 nucleotides
HP15_661: HP15_661 - hypothetical protein, at 683,279 to 684,058
_661
HP15_662: HP15_662 - phage tail protein I, at 684,061 to 684,636
_662
HP15_663: HP15_663 - phage baseplate assembly protein, at 684,629 to 685,549
_663
HP15_664: HP15_664 - GPW/gp25, at 685,549 to 685,887
_664
Position (kb) 684
685 Strain fitness (log2 ratio) -1
0
1
2
3 at 683.149 kb on + strand at 683.155 kb on + strand at 683.228 kb on + strand at 683.285 kb on - strand at 683.285 kb on - strand at 683.321 kb on + strand at 683.345 kb on - strand at 683.371 kb on + strand, within HP15_661 at 683.438 kb on + strand, within HP15_661 at 683.456 kb on - strand, within HP15_661 at 683.647 kb on + strand, within HP15_661 at 683.728 kb on - strand, within HP15_661 at 683.769 kb on - strand, within HP15_661 at 683.840 kb on - strand, within HP15_661 at 683.845 kb on - strand, within HP15_661 at 683.903 kb on + strand, within HP15_661 at 683.908 kb on + strand, within HP15_661 at 683.911 kb on - strand, within HP15_661 at 683.950 kb on + strand, within HP15_661 at 684.024 kb on + strand at 684.032 kb on - strand at 684.122 kb on - strand, within HP15_662 at 684.187 kb on - strand, within HP15_662 at 684.194 kb on + strand, within HP15_662 at 684.196 kb on + strand, within HP15_662 at 684.196 kb on + strand, within HP15_662 at 684.406 kb on - strand, within HP15_662 at 684.474 kb on + strand, within HP15_662 at 684.488 kb on + strand, within HP15_662 at 684.495 kb on - strand, within HP15_662 at 684.567 kb on + strand, within HP15_662 at 684.635 kb on - strand at 684.682 kb on + strand at 684.716 kb on + strand at 684.721 kb on + strand, within HP15_663 at 684.721 kb on + strand, within HP15_663 at 684.721 kb on + strand, within HP15_663 at 684.729 kb on - strand, within HP15_663 at 684.746 kb on + strand, within HP15_663 at 684.773 kb on + strand, within HP15_663 at 684.901 kb on - strand, within HP15_663 at 684.968 kb on + strand, within HP15_663 at 684.970 kb on + strand, within HP15_663 at 684.976 kb on - strand, within HP15_663 at 684.976 kb on - strand, within HP15_663 at 684.976 kb on - strand, within HP15_663 at 685.009 kb on + strand, within HP15_663 at 685.030 kb on - strand, within HP15_663 at 685.059 kb on + strand, within HP15_663 at 685.093 kb on + strand, within HP15_663 at 685.131 kb on + strand, within HP15_663 at 685.139 kb on - strand, within HP15_663 at 685.209 kb on + strand, within HP15_663 at 685.275 kb on - strand, within HP15_663 at 685.275 kb on - strand, within HP15_663 at 685.437 kb on + strand, within HP15_663 at 685.452 kb on + strand, within HP15_663 at 685.460 kb on - strand at 685.462 kb on + strand at 685.565 kb on - strand at 685.615 kb on + strand, within HP15_664
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 683,149 + +1.6 683,155 + +1.7 683,228 + +2.3 683,285 - +1.8 683,285 - +1.6 683,321 + +1.2 683,345 - +1.9 683,371 + HP15_661 0.12 +1.9 683,438 + HP15_661 0.20 +2.1 683,456 - HP15_661 0.23 +1.6 683,647 + HP15_661 0.47 +1.6 683,728 - HP15_661 0.58 -0.5 683,769 - HP15_661 0.63 +2.0 683,840 - HP15_661 0.72 -0.5 683,845 - HP15_661 0.73 -0.5 683,903 + HP15_661 0.80 +1.1 683,908 + HP15_661 0.81 +2.2 683,911 - HP15_661 0.81 +1.5 683,950 + HP15_661 0.86 -0.7 684,024 + +1.3 684,032 - +2.3 684,122 - HP15_662 0.11 +1.7 684,187 - HP15_662 0.22 +3.3 684,194 + HP15_662 0.23 +1.8 684,196 + HP15_662 0.23 +2.0 684,196 + HP15_662 0.23 +2.4 684,406 - HP15_662 0.60 +1.1 684,474 + HP15_662 0.72 +1.0 684,488 + HP15_662 0.74 +0.9 684,495 - HP15_662 0.75 +2.5 684,567 + HP15_662 0.88 +1.9 684,635 - +1.8 684,682 + +1.6 684,716 + +1.7 684,721 + HP15_663 0.10 +1.3 684,721 + HP15_663 0.10 +1.3 684,721 + HP15_663 0.10 +1.6 684,729 - HP15_663 0.11 +3.3 684,746 + HP15_663 0.13 +1.8 684,773 + HP15_663 0.16 +2.2 684,901 - HP15_663 0.30 +1.5 684,968 + HP15_663 0.37 +0.7 684,970 + HP15_663 0.37 +1.9 684,976 - HP15_663 0.38 +1.5 684,976 - HP15_663 0.38 +2.1 684,976 - HP15_663 0.38 +2.1 685,009 + HP15_663 0.41 +1.0 685,030 - HP15_663 0.44 +1.9 685,059 + HP15_663 0.47 +1.7 685,093 + HP15_663 0.50 +2.9 685,131 + HP15_663 0.55 +1.9 685,139 - HP15_663 0.55 +2.4 685,209 + HP15_663 0.63 +2.7 685,275 - HP15_663 0.70 +1.4 685,275 - HP15_663 0.70 +1.2 685,437 + HP15_663 0.88 +1.8 685,452 + HP15_663 0.89 +2.3 685,460 - +2.2 685,462 + +1.8 685,565 - +1.2 685,615 + HP15_664 0.19 +1.5
Or see this region's nucleotide sequence