Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_647 and HP15_648 are separated by 436 nucleotides HP15_648 and HP15_649 overlap by 10 nucleotides HP15_649 and HP15_650 overlap by 11 nucleotides HP15_650 and HP15_651 overlap by 1 nucleotides
HP15_647: HP15_647 - conserved hypothetical protein, secreted, at 669,924 to 670,652
_647
HP15_648: HP15_648 - phage late control D, at 671,089 to 672,087
_648
HP15_649: HP15_649 - phage tail protein X, at 672,078 to 672,290
_649
HP15_650: HP15_650 - phage P2 GpU, at 672,280 to 672,672
_650
HP15_651: HP15_651 - protein putative phage tail tape measure protein-like protein, at 672,672 to 674,426
_651
Position (kb) 671
672
673 Strain fitness (log2 ratio) -1
0
1
2 at 670.220 kb on + strand, within HP15_647 at 670.293 kb on + strand, within HP15_647 at 670.363 kb on - strand, within HP15_647 at 670.378 kb on + strand, within HP15_647 at 670.386 kb on - strand, within HP15_647 at 670.405 kb on + strand, within HP15_647 at 670.423 kb on - strand, within HP15_647 at 670.448 kb on + strand, within HP15_647 at 670.499 kb on - strand, within HP15_647 at 670.516 kb on + strand, within HP15_647 at 670.519 kb on - strand, within HP15_647 at 670.519 kb on - strand, within HP15_647 at 670.524 kb on - strand, within HP15_647 at 670.595 kb on + strand at 670.595 kb on + strand at 670.654 kb on - strand at 670.663 kb on + strand at 670.857 kb on + strand at 670.932 kb on + strand at 670.962 kb on - strand at 671.158 kb on - strand at 671.326 kb on - strand, within HP15_648 at 671.372 kb on + strand, within HP15_648 at 671.374 kb on - strand, within HP15_648 at 671.518 kb on - strand, within HP15_648 at 671.580 kb on + strand, within HP15_648 at 671.588 kb on - strand, within HP15_648 at 671.590 kb on + strand, within HP15_648 at 671.598 kb on - strand, within HP15_648 at 671.652 kb on + strand, within HP15_648 at 671.683 kb on - strand, within HP15_648 at 671.685 kb on - strand, within HP15_648 at 671.764 kb on + strand, within HP15_648 at 671.811 kb on + strand, within HP15_648 at 671.850 kb on + strand, within HP15_648 at 671.917 kb on - strand, within HP15_648 at 671.981 kb on - strand, within HP15_648 at 672.097 kb on - strand at 672.122 kb on - strand, within HP15_649 at 672.163 kb on - strand, within HP15_649 at 672.242 kb on - strand, within HP15_649 at 672.357 kb on - strand, within HP15_650 at 672.392 kb on - strand, within HP15_650 at 672.416 kb on + strand, within HP15_650 at 672.416 kb on + strand, within HP15_650 at 672.458 kb on + strand, within HP15_650 at 672.458 kb on + strand, within HP15_650 at 672.466 kb on - strand, within HP15_650 at 672.546 kb on - strand, within HP15_650 at 672.553 kb on + strand, within HP15_650 at 672.558 kb on + strand, within HP15_650 at 672.561 kb on - strand, within HP15_650 at 672.561 kb on - strand, within HP15_650 at 672.561 kb on - strand, within HP15_650 at 672.576 kb on + strand, within HP15_650 at 672.581 kb on - strand, within HP15_650 at 672.610 kb on + strand, within HP15_650 at 672.701 kb on + strand at 672.793 kb on + strand at 672.860 kb on - strand, within HP15_651 at 672.877 kb on - strand, within HP15_651 at 673.049 kb on - strand, within HP15_651
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 670,220 + HP15_647 0.41 -0.5 670,293 + HP15_647 0.51 -0.3 670,363 - HP15_647 0.60 +0.9 670,378 + HP15_647 0.62 +0.2 670,386 - HP15_647 0.63 +0.1 670,405 + HP15_647 0.66 +0.3 670,423 - HP15_647 0.68 -1.4 670,448 + HP15_647 0.72 -0.0 670,499 - HP15_647 0.79 +0.2 670,516 + HP15_647 0.81 -0.5 670,519 - HP15_647 0.82 +1.0 670,519 - HP15_647 0.82 +0.3 670,524 - HP15_647 0.82 +0.4 670,595 + +0.1 670,595 + +0.8 670,654 - +0.9 670,663 + +1.0 670,857 + -0.1 670,932 + +1.0 670,962 - +2.5 671,158 - +1.6 671,326 - HP15_648 0.24 +1.6 671,372 + HP15_648 0.28 +1.3 671,374 - HP15_648 0.29 +2.0 671,518 - HP15_648 0.43 +1.0 671,580 + HP15_648 0.49 -0.5 671,588 - HP15_648 0.50 +1.1 671,590 + HP15_648 0.50 +0.7 671,598 - HP15_648 0.51 +0.9 671,652 + HP15_648 0.56 +1.4 671,683 - HP15_648 0.59 +1.4 671,685 - HP15_648 0.60 +1.6 671,764 + HP15_648 0.68 +1.4 671,811 + HP15_648 0.72 +1.5 671,850 + HP15_648 0.76 +2.3 671,917 - HP15_648 0.83 -0.5 671,981 - HP15_648 0.89 +0.7 672,097 - +2.0 672,122 - HP15_649 0.21 +0.5 672,163 - HP15_649 0.40 +1.4 672,242 - HP15_649 0.77 +2.5 672,357 - HP15_650 0.20 +1.4 672,392 - HP15_650 0.28 +0.8 672,416 + HP15_650 0.35 +0.2 672,416 + HP15_650 0.35 +0.5 672,458 + HP15_650 0.45 +2.2 672,458 + HP15_650 0.45 +1.9 672,466 - HP15_650 0.47 +1.3 672,546 - HP15_650 0.68 +1.3 672,553 + HP15_650 0.69 +2.5 672,558 + HP15_650 0.71 +2.3 672,561 - HP15_650 0.72 +0.5 672,561 - HP15_650 0.72 +1.3 672,561 - HP15_650 0.72 -0.1 672,576 + HP15_650 0.75 +2.3 672,581 - HP15_650 0.77 -1.6 672,610 + HP15_650 0.84 +0.2 672,701 + +1.2 672,793 + +1.0 672,860 - HP15_651 0.11 +1.2 672,877 - HP15_651 0.12 +1.6 673,049 - HP15_651 0.21 +1.7
Or see this region's nucleotide sequence