Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g122

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_p187g120 and HP15_p187g121 are separated by 97 nucleotidesHP15_p187g121 and HP15_p187g122 are separated by 39 nucleotidesHP15_p187g122 and HP15_p187g123 are separated by 24 nucleotides HP15_p187g120: HP15_p187g120 - secreted protein, at 122,018 to 123,472 _p187g120 HP15_p187g121: HP15_p187g121 - protein containing signal transduction response regulator, receiver region domains, at 123,570 to 124,238 _p187g121 HP15_p187g122: HP15_p187g122 - membrane protein, at 124,278 to 124,688 _p187g122 HP15_p187g123: HP15_p187g123 - conserved hypothetical protein, secreted, at 124,713 to 126,365 _p187g123 Position (kb) 124 125Strain fitness (log2 ratio) -2 -1 0 1 2at 123.289 kb on - strand, within HP15_p187g120at 123.293 kb on + strand, within HP15_p187g120at 123.303 kb on + strand, within HP15_p187g120at 123.308 kb on - strand, within HP15_p187g120at 123.309 kb on - strand, within HP15_p187g120at 123.311 kb on - strand, within HP15_p187g120at 123.311 kb on - strand, within HP15_p187g120at 123.316 kb on - strand, within HP15_p187g120at 123.324 kb on + strand, within HP15_p187g120at 123.324 kb on + strand, within HP15_p187g120at 123.330 kb on + strandat 123.338 kb on - strandat 123.364 kb on + strandat 123.364 kb on - strandat 123.387 kb on + strandat 123.387 kb on + strandat 123.387 kb on + strandat 123.395 kb on - strandat 123.467 kb on + strandat 123.475 kb on - strandat 123.475 kb on - strandat 123.536 kb on - strandat 123.577 kb on + strandat 123.579 kb on + strandat 123.587 kb on - strandat 123.587 kb on - strandat 123.638 kb on + strand, within HP15_p187g121at 123.661 kb on + strand, within HP15_p187g121at 123.669 kb on - strand, within HP15_p187g121at 123.669 kb on - strand, within HP15_p187g121at 123.687 kb on + strand, within HP15_p187g121at 123.704 kb on - strand, within HP15_p187g121at 123.772 kb on + strand, within HP15_p187g121at 123.777 kb on + strand, within HP15_p187g121at 123.777 kb on + strand, within HP15_p187g121at 123.786 kb on - strand, within HP15_p187g121at 123.787 kb on + strand, within HP15_p187g121at 123.792 kb on + strand, within HP15_p187g121at 123.795 kb on - strand, within HP15_p187g121at 123.797 kb on + strand, within HP15_p187g121at 123.797 kb on + strand, within HP15_p187g121at 123.805 kb on - strand, within HP15_p187g121at 123.831 kb on + strand, within HP15_p187g121at 123.831 kb on + strand, within HP15_p187g121at 123.831 kb on + strand, within HP15_p187g121at 123.831 kb on + strand, within HP15_p187g121at 123.831 kb on + strand, within HP15_p187g121at 123.831 kb on + strand, within HP15_p187g121at 123.831 kb on + strand, within HP15_p187g121at 123.839 kb on + strand, within HP15_p187g121at 123.839 kb on - strand, within HP15_p187g121at 123.839 kb on - strand, within HP15_p187g121at 123.839 kb on - strand, within HP15_p187g121at 123.839 kb on - strand, within HP15_p187g121at 123.839 kb on - strand, within HP15_p187g121at 123.885 kb on - strand, within HP15_p187g121at 123.887 kb on + strand, within HP15_p187g121at 123.937 kb on - strand, within HP15_p187g121at 123.971 kb on + strand, within HP15_p187g121at 123.971 kb on + strand, within HP15_p187g121at 123.971 kb on + strand, within HP15_p187g121at 123.997 kb on + strand, within HP15_p187g121at 124.057 kb on + strand, within HP15_p187g121at 124.135 kb on - strand, within HP15_p187g121at 124.135 kb on - strand, within HP15_p187g121at 124.135 kb on - strand, within HP15_p187g121at 124.250 kb on + strandat 124.254 kb on + strandat 124.261 kb on + strandat 124.283 kb on - strandat 124.302 kb on - strandat 124.302 kb on - strandat 124.408 kb on + strand, within HP15_p187g122at 124.451 kb on + strand, within HP15_p187g122at 124.454 kb on - strand, within HP15_p187g122at 124.486 kb on + strand, within HP15_p187g122at 124.487 kb on + strand, within HP15_p187g122at 124.491 kb on + strand, within HP15_p187g122at 124.509 kb on + strand, within HP15_p187g122at 124.509 kb on - strand, within HP15_p187g122at 124.543 kb on + strand, within HP15_p187g122at 124.546 kb on - strand, within HP15_p187g122at 124.548 kb on + strand, within HP15_p187g122at 124.548 kb on + strand, within HP15_p187g122at 124.556 kb on - strand, within HP15_p187g122at 124.584 kb on + strand, within HP15_p187g122at 124.765 kb on - strandat 124.808 kb on + strandat 124.880 kb on + strand, within HP15_p187g123at 124.880 kb on + strandat 124.888 kb on - strand, within HP15_p187g123at 124.888 kb on - strand, within HP15_p187g123at 124.888 kb on - strand, within HP15_p187g123at 124.892 kb on + strand, within HP15_p187g123at 124.905 kb on - strand, within HP15_p187g123at 124.915 kb on - strand, within HP15_p187g123at 124.939 kb on - strand, within HP15_p187g123at 124.940 kb on + strand, within HP15_p187g123at 124.945 kb on + strand, within HP15_p187g123at 124.945 kb on + strand, within HP15_p187g123at 124.953 kb on - strand, within HP15_p187g123at 125.026 kb on - strand, within HP15_p187g123at 125.034 kb on + strand, within HP15_p187g123at 125.042 kb on - strand, within HP15_p187g123at 125.054 kb on + strand, within HP15_p187g123at 125.054 kb on - strand, within HP15_p187g123at 125.062 kb on - strand, within HP15_p187g123at 125.062 kb on - strand, within HP15_p187g123at 125.098 kb on + strand, within HP15_p187g123at 125.099 kb on + strand, within HP15_p187g123at 125.099 kb on + strand, within HP15_p187g123at 125.101 kb on - strand, within HP15_p187g123at 125.113 kb on + strand, within HP15_p187g123at 125.131 kb on + strand, within HP15_p187g123at 125.133 kb on + strand, within HP15_p187g123at 125.133 kb on + strand, within HP15_p187g123at 125.134 kb on - strand, within HP15_p187g123at 125.141 kb on - strand, within HP15_p187g123at 125.154 kb on + strand, within HP15_p187g123at 125.185 kb on + strand, within HP15_p187g123at 125.186 kb on + strand, within HP15_p187g123at 125.187 kb on + strand, within HP15_p187g123at 125.193 kb on - strand, within HP15_p187g123at 125.193 kb on - strand, within HP15_p187g123at 125.193 kb on - strand, within HP15_p187g123at 125.226 kb on - strand, within HP15_p187g123at 125.276 kb on - strand, within HP15_p187g123at 125.289 kb on + strand, within HP15_p187g123at 125.297 kb on - strand, within HP15_p187g123at 125.297 kb on - strand, within HP15_p187g123at 125.297 kb on - strand, within HP15_p187g123at 125.297 kb on - strand, within HP15_p187g123at 125.328 kb on + strand, within HP15_p187g123at 125.328 kb on + strand, within HP15_p187g123at 125.338 kb on + strand, within HP15_p187g123at 125.344 kb on + strand, within HP15_p187g123at 125.346 kb on - strand, within HP15_p187g123at 125.352 kb on - strand, within HP15_p187g123at 125.352 kb on - strand, within HP15_p187g123at 125.359 kb on + strand, within HP15_p187g123at 125.359 kb on + strand, within HP15_p187g123at 125.359 kb on + strand, within HP15_p187g123at 125.359 kb on + strand, within HP15_p187g123at 125.367 kb on + strand, within HP15_p187g123at 125.386 kb on - strand, within HP15_p187g123at 125.405 kb on - strand, within HP15_p187g123at 125.442 kb on - strand, within HP15_p187g123at 125.473 kb on + strand, within HP15_p187g123at 125.473 kb on + strand, within HP15_p187g123at 125.476 kb on - strand, within HP15_p187g123at 125.481 kb on - strand, within HP15_p187g123at 125.503 kb on + strand, within HP15_p187g123at 125.511 kb on - strand, within HP15_p187g123at 125.514 kb on + strand, within HP15_p187g123at 125.547 kb on + strand, within HP15_p187g123at 125.547 kb on + strand, within HP15_p187g123at 125.555 kb on - strand, within HP15_p187g123at 125.555 kb on - strand, within HP15_p187g123at 125.557 kb on + strand, within HP15_p187g123at 125.557 kb on + strand, within HP15_p187g123at 125.557 kb on + strand, within HP15_p187g123at 125.581 kb on - strand, within HP15_p187g123at 125.612 kb on + strand, within HP15_p187g123at 125.621 kb on + strand, within HP15_p187g123at 125.636 kb on + strand, within HP15_p187g123at 125.636 kb on + strand, within HP15_p187g123at 125.636 kb on + strand, within HP15_p187g123at 125.636 kb on + strand, within HP15_p187g123at 125.643 kb on + strand, within HP15_p187g123at 125.643 kb on + strand, within HP15_p187g123at 125.643 kb on + strand, within HP15_p187g123at 125.643 kb on + strand, within HP15_p187g123at 125.643 kb on + strand, within HP15_p187g123at 125.643 kb on + strand, within HP15_p187g123at 125.644 kb on - strand, within HP15_p187g123at 125.644 kb on - strand, within HP15_p187g123at 125.644 kb on - strand, within HP15_p187g123at 125.644 kb on - strand, within HP15_p187g123at 125.644 kb on - strand, within HP15_p187g123at 125.644 kb on - strand, within HP15_p187g123at 125.644 kb on - strand, within HP15_p187g123at 125.644 kb on - strand, within HP15_p187g123at 125.651 kb on - strand, within HP15_p187g123at 125.651 kb on - strand, within HP15_p187g123at 125.651 kb on - strand, within HP15_p187g123at 125.656 kb on - strand, within HP15_p187g123at 125.657 kb on + strand, within HP15_p187g123at 125.664 kb on + strand, within HP15_p187g123at 125.665 kb on - strand, within HP15_p187g123at 125.670 kb on - strand, within HP15_p187g123at 125.670 kb on - strand, within HP15_p187g123at 125.673 kb on + strand, within HP15_p187g123at 125.681 kb on - strand, within HP15_p187g123at 125.688 kb on + strand, within HP15_p187g123

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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123,289 - HP15_p187g120 0.87 +0.8
123,293 + HP15_p187g120 0.88 +0.4
123,303 + HP15_p187g120 0.88 +0.0
123,308 - HP15_p187g120 0.89 -0.0
123,309 - HP15_p187g120 0.89 -1.0
123,311 - HP15_p187g120 0.89 -1.1
123,311 - HP15_p187g120 0.89 -0.3
123,316 - HP15_p187g120 0.89 -1.0
123,324 + HP15_p187g120 0.90 +0.5
123,324 + HP15_p187g120 0.90 -1.0
123,330 + +0.6
123,338 - +0.5
123,364 + -1.6
123,364 - -0.1
123,387 + -1.6
123,387 + -0.4
123,387 + +0.4
123,395 - +0.0
123,467 + +1.0
123,475 - -0.3
123,475 - -0.5
123,536 - +0.1
123,577 + +1.0
123,579 + -0.3
123,587 - +0.4
123,587 - -0.1
123,638 + HP15_p187g121 0.10 +1.6
123,661 + HP15_p187g121 0.14 -0.3
123,669 - HP15_p187g121 0.15 -0.2
123,669 - HP15_p187g121 0.15 -0.3
123,687 + HP15_p187g121 0.17 +0.2
123,704 - HP15_p187g121 0.20 -0.5
123,772 + HP15_p187g121 0.30 +0.1
123,777 + HP15_p187g121 0.31 +0.2
123,777 + HP15_p187g121 0.31 -1.3
123,786 - HP15_p187g121 0.32 +0.8
123,787 + HP15_p187g121 0.32 -0.2
123,792 + HP15_p187g121 0.33 -0.3
123,795 - HP15_p187g121 0.34 -0.3
123,797 + HP15_p187g121 0.34 +1.4
123,797 + HP15_p187g121 0.34 -1.8
123,805 - HP15_p187g121 0.35 -0.8
123,831 + HP15_p187g121 0.39 +1.5
123,831 + HP15_p187g121 0.39 -1.8
123,831 + HP15_p187g121 0.39 -0.9
123,831 + HP15_p187g121 0.39 +0.8
123,831 + HP15_p187g121 0.39 -0.1
123,831 + HP15_p187g121 0.39 +0.1
123,831 + HP15_p187g121 0.39 +1.1
123,839 + HP15_p187g121 0.40 -0.2
123,839 - HP15_p187g121 0.40 -0.9
123,839 - HP15_p187g121 0.40 +0.7
123,839 - HP15_p187g121 0.40 -0.5
123,839 - HP15_p187g121 0.40 +0.0
123,839 - HP15_p187g121 0.40 -0.0
123,885 - HP15_p187g121 0.47 +0.4
123,887 + HP15_p187g121 0.47 -0.6
123,937 - HP15_p187g121 0.55 +0.4
123,971 + HP15_p187g121 0.60 -0.3
123,971 + HP15_p187g121 0.60 -0.4
123,971 + HP15_p187g121 0.60 -1.6
123,997 + HP15_p187g121 0.64 +1.2
124,057 + HP15_p187g121 0.73 +0.7
124,135 - HP15_p187g121 0.84 -1.0
124,135 - HP15_p187g121 0.84 +0.2
124,135 - HP15_p187g121 0.84 +0.5
124,250 + -0.1
124,254 + -0.9
124,261 + +0.1
124,283 - -0.1
124,302 - -0.8
124,302 - -0.7
124,408 + HP15_p187g122 0.32 -0.6
124,451 + HP15_p187g122 0.42 -0.3
124,454 - HP15_p187g122 0.43 -1.3
124,486 + HP15_p187g122 0.51 +0.2
124,487 + HP15_p187g122 0.51 -1.0
124,491 + HP15_p187g122 0.52 -0.8
124,509 + HP15_p187g122 0.56 +0.4
124,509 - HP15_p187g122 0.56 -1.0
124,543 + HP15_p187g122 0.64 +0.2
124,546 - HP15_p187g122 0.65 -0.6
124,548 + HP15_p187g122 0.66 -0.8
124,548 + HP15_p187g122 0.66 -0.6
124,556 - HP15_p187g122 0.68 +0.4
124,584 + HP15_p187g122 0.74 -1.2
124,765 - -0.6
124,808 + +0.5
124,880 + HP15_p187g123 0.10 -0.5
124,880 + +0.4
124,888 - HP15_p187g123 0.11 +0.4
124,888 - HP15_p187g123 0.11 -2.6
124,888 - HP15_p187g123 0.11 -0.8
124,892 + HP15_p187g123 0.11 -1.9
124,905 - HP15_p187g123 0.12 -2.2
124,915 - HP15_p187g123 0.12 -0.1
124,939 - HP15_p187g123 0.14 +0.6
124,940 + HP15_p187g123 0.14 +1.4
124,945 + HP15_p187g123 0.14 +0.4
124,945 + HP15_p187g123 0.14 -0.6
124,953 - HP15_p187g123 0.15 -0.2
125,026 - HP15_p187g123 0.19 -0.5
125,034 + HP15_p187g123 0.19 -0.6
125,042 - HP15_p187g123 0.20 -0.7
125,054 + HP15_p187g123 0.21 -0.2
125,054 - HP15_p187g123 0.21 +2.6
125,062 - HP15_p187g123 0.21 -0.1
125,062 - HP15_p187g123 0.21 +0.7
125,098 + HP15_p187g123 0.23 -0.9
125,099 + HP15_p187g123 0.23 -0.6
125,099 + HP15_p187g123 0.23 -0.3
125,101 - HP15_p187g123 0.23 +0.2
125,113 + HP15_p187g123 0.24 +0.1
125,131 + HP15_p187g123 0.25 +1.1
125,133 + HP15_p187g123 0.25 +0.4
125,133 + HP15_p187g123 0.25 +0.3
125,134 - HP15_p187g123 0.25 +0.2
125,141 - HP15_p187g123 0.26 +0.2
125,154 + HP15_p187g123 0.27 +2.0
125,185 + HP15_p187g123 0.29 -0.2
125,186 + HP15_p187g123 0.29 +0.1
125,187 + HP15_p187g123 0.29 +0.9
125,193 - HP15_p187g123 0.29 -0.4
125,193 - HP15_p187g123 0.29 -0.3
125,193 - HP15_p187g123 0.29 +0.1
125,226 - HP15_p187g123 0.31 +1.6
125,276 - HP15_p187g123 0.34 -0.2
125,289 + HP15_p187g123 0.35 -0.2
125,297 - HP15_p187g123 0.35 +2.0
125,297 - HP15_p187g123 0.35 +0.6
125,297 - HP15_p187g123 0.35 +0.6
125,297 - HP15_p187g123 0.35 -0.1
125,328 + HP15_p187g123 0.37 -0.1
125,328 + HP15_p187g123 0.37 +0.0
125,338 + HP15_p187g123 0.38 +0.4
125,344 + HP15_p187g123 0.38 +0.2
125,346 - HP15_p187g123 0.38 -1.4
125,352 - HP15_p187g123 0.39 +0.4
125,352 - HP15_p187g123 0.39 -0.2
125,359 + HP15_p187g123 0.39 -0.4
125,359 + HP15_p187g123 0.39 -0.1
125,359 + HP15_p187g123 0.39 +0.3
125,359 + HP15_p187g123 0.39 -2.4
125,367 + HP15_p187g123 0.40 +0.3
125,386 - HP15_p187g123 0.41 -0.6
125,405 - HP15_p187g123 0.42 -0.6
125,442 - HP15_p187g123 0.44 -0.5
125,473 + HP15_p187g123 0.46 +0.2
125,473 + HP15_p187g123 0.46 -0.5
125,476 - HP15_p187g123 0.46 -0.4
125,481 - HP15_p187g123 0.46 +0.3
125,503 + HP15_p187g123 0.48 -0.6
125,511 - HP15_p187g123 0.48 +1.1
125,514 + HP15_p187g123 0.48 -0.4
125,547 + HP15_p187g123 0.50 -0.6
125,547 + HP15_p187g123 0.50 +0.1
125,555 - HP15_p187g123 0.51 +1.0
125,555 - HP15_p187g123 0.51 -0.2
125,557 + HP15_p187g123 0.51 -0.9
125,557 + HP15_p187g123 0.51 +0.3
125,557 + HP15_p187g123 0.51 +0.1
125,581 - HP15_p187g123 0.53 -0.4
125,612 + HP15_p187g123 0.54 +0.2
125,621 + HP15_p187g123 0.55 -0.0
125,636 + HP15_p187g123 0.56 -0.6
125,636 + HP15_p187g123 0.56 +0.0
125,636 + HP15_p187g123 0.56 -0.5
125,636 + HP15_p187g123 0.56 +0.2
125,643 + HP15_p187g123 0.56 -0.0
125,643 + HP15_p187g123 0.56 +0.8
125,643 + HP15_p187g123 0.56 -0.0
125,643 + HP15_p187g123 0.56 +0.3
125,643 + HP15_p187g123 0.56 -0.6
125,643 + HP15_p187g123 0.56 -0.4
125,644 - HP15_p187g123 0.56 -1.0
125,644 - HP15_p187g123 0.56 +0.3
125,644 - HP15_p187g123 0.56 -0.9
125,644 - HP15_p187g123 0.56 +0.4
125,644 - HP15_p187g123 0.56 +1.0
125,644 - HP15_p187g123 0.56 -0.3
125,644 - HP15_p187g123 0.56 +0.2
125,644 - HP15_p187g123 0.56 +0.9
125,651 - HP15_p187g123 0.57 -0.0
125,651 - HP15_p187g123 0.57 -0.4
125,651 - HP15_p187g123 0.57 -1.3
125,656 - HP15_p187g123 0.57 +0.1
125,657 + HP15_p187g123 0.57 -0.8
125,664 + HP15_p187g123 0.58 -0.3
125,665 - HP15_p187g123 0.58 +0.8
125,670 - HP15_p187g123 0.58 -0.6
125,670 - HP15_p187g123 0.58 -0.2
125,673 + HP15_p187g123 0.58 +0.1
125,681 - HP15_p187g123 0.59 -0.9
125,688 + HP15_p187g123 0.59 -0.8

Or see this region's nucleotide sequence