Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g118

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_p187g117 and HP15_p187g118 are separated by 22 nucleotidesHP15_p187g118 and HP15_p187g119 are separated by 325 nucleotides HP15_p187g117: HP15_p187g117 - phage integrase family protein, at 117,532 to 118,788 _p187g117 HP15_p187g118: HP15_p187g118 - conserved hypothetical protein, at 118,811 to 119,971 _p187g118 HP15_p187g119: HP15_p187g119 - hyalin repeat protein, at 120,297 to 121,934 _p187g119 Position (kb) 118 119 120Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 117.972 kb on - strand, within HP15_p187g117at 117.982 kb on - strand, within HP15_p187g117at 117.994 kb on + strand, within HP15_p187g117at 117.994 kb on + strand, within HP15_p187g117at 118.002 kb on - strand, within HP15_p187g117at 118.002 kb on - strand, within HP15_p187g117at 118.027 kb on + strand, within HP15_p187g117at 118.027 kb on + strand, within HP15_p187g117at 118.052 kb on + strand, within HP15_p187g117at 118.052 kb on + strand, within HP15_p187g117at 118.060 kb on - strand, within HP15_p187g117at 118.060 kb on - strand, within HP15_p187g117at 118.088 kb on - strand, within HP15_p187g117at 118.110 kb on + strand, within HP15_p187g117at 118.111 kb on + strand, within HP15_p187g117at 118.120 kb on + strand, within HP15_p187g117at 118.158 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.163 kb on + strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.171 kb on - strand, within HP15_p187g117at 118.252 kb on + strand, within HP15_p187g117at 118.338 kb on - strand, within HP15_p187g117at 118.398 kb on + strand, within HP15_p187g117at 118.417 kb on - strand, within HP15_p187g117at 118.437 kb on - strand, within HP15_p187g117at 118.449 kb on - strand, within HP15_p187g117at 118.455 kb on - strand, within HP15_p187g117at 118.466 kb on - strand, within HP15_p187g117at 118.466 kb on - strand, within HP15_p187g117at 118.466 kb on - strand, within HP15_p187g117at 118.472 kb on + strand, within HP15_p187g117at 118.480 kb on - strand, within HP15_p187g117at 118.480 kb on - strand, within HP15_p187g117at 118.487 kb on - strand, within HP15_p187g117at 118.487 kb on - strand, within HP15_p187g117at 118.501 kb on + strand, within HP15_p187g117at 118.502 kb on + strand, within HP15_p187g117at 118.502 kb on + strand, within HP15_p187g117at 118.529 kb on + strand, within HP15_p187g117at 118.532 kb on - strand, within HP15_p187g117at 118.549 kb on - strand, within HP15_p187g117at 118.641 kb on - strand, within HP15_p187g117at 118.646 kb on - strand, within HP15_p187g117at 118.656 kb on - strand, within HP15_p187g117at 118.656 kb on - strand, within HP15_p187g117at 118.683 kb on - strandat 118.723 kb on - strandat 118.747 kb on - strandat 118.766 kb on - strandat 118.776 kb on - strandat 118.778 kb on - strandat 118.817 kb on + strandat 118.934 kb on - strand, within HP15_p187g118at 118.948 kb on + strand, within HP15_p187g118at 119.050 kb on + strand, within HP15_p187g118at 119.066 kb on + strand, within HP15_p187g118at 119.072 kb on + strand, within HP15_p187g118at 119.074 kb on - strand, within HP15_p187g118at 119.074 kb on - strand, within HP15_p187g118at 119.091 kb on + strand, within HP15_p187g118at 119.098 kb on - strand, within HP15_p187g118at 119.098 kb on - strand, within HP15_p187g118at 119.098 kb on - strand, within HP15_p187g118at 119.098 kb on - strand, within HP15_p187g118at 119.140 kb on - strand, within HP15_p187g118at 119.154 kb on + strand, within HP15_p187g118at 119.247 kb on - strand, within HP15_p187g118at 119.303 kb on + strand, within HP15_p187g118at 119.333 kb on - strand, within HP15_p187g118at 119.407 kb on - strand, within HP15_p187g118at 119.483 kb on - strand, within HP15_p187g118at 119.490 kb on - strand, within HP15_p187g118at 119.511 kb on + strand, within HP15_p187g118at 119.531 kb on - strand, within HP15_p187g118at 119.595 kb on + strand, within HP15_p187g118at 119.605 kb on + strand, within HP15_p187g118at 119.613 kb on + strand, within HP15_p187g118at 119.613 kb on + strand, within HP15_p187g118at 119.658 kb on + strand, within HP15_p187g118at 119.659 kb on - strand, within HP15_p187g118at 119.663 kb on + strand, within HP15_p187g118at 119.663 kb on + strand, within HP15_p187g118at 119.673 kb on + strand, within HP15_p187g118at 119.673 kb on + strand, within HP15_p187g118at 119.725 kb on + strand, within HP15_p187g118at 119.727 kb on + strand, within HP15_p187g118at 119.727 kb on + strand, within HP15_p187g118at 119.735 kb on - strand, within HP15_p187g118at 119.739 kb on + strand, within HP15_p187g118at 119.747 kb on - strand, within HP15_p187g118at 119.757 kb on - strand, within HP15_p187g118at 119.809 kb on - strand, within HP15_p187g118at 120.117 kb on + strandat 120.117 kb on + strandat 120.117 kb on + strandat 120.117 kb on + strandat 120.117 kb on + strandat 120.125 kb on - strandat 120.125 kb on - strandat 120.127 kb on + strandat 120.256 kb on + strandat 120.258 kb on + strandat 120.272 kb on + strandat 120.280 kb on - strandat 120.287 kb on + strandat 120.295 kb on - strandat 120.306 kb on + strandat 120.319 kb on - strandat 120.319 kb on - strandat 120.322 kb on - strandat 120.332 kb on + strandat 120.392 kb on + strandat 120.398 kb on - strandat 120.405 kb on + strandat 120.413 kb on - strandat 120.413 kb on - strandat 120.464 kb on - strand, within HP15_p187g119at 120.471 kb on - strand, within HP15_p187g119at 120.492 kb on + strand, within HP15_p187g119at 120.522 kb on + strand, within HP15_p187g119at 120.532 kb on - strand, within HP15_p187g119at 120.538 kb on + strand, within HP15_p187g119at 120.559 kb on - strand, within HP15_p187g119at 120.559 kb on - strand, within HP15_p187g119at 120.559 kb on - strand, within HP15_p187g119at 120.567 kb on - strand, within HP15_p187g119at 120.574 kb on + strand, within HP15_p187g119at 120.574 kb on + strand, within HP15_p187g119at 120.582 kb on - strand, within HP15_p187g119at 120.582 kb on - strand, within HP15_p187g119at 120.604 kb on - strand, within HP15_p187g119at 120.614 kb on + strand, within HP15_p187g119at 120.634 kb on - strand, within HP15_p187g119at 120.663 kb on - strand, within HP15_p187g119at 120.707 kb on + strand, within HP15_p187g119at 120.715 kb on - strand, within HP15_p187g119at 120.759 kb on + strand, within HP15_p187g119at 120.774 kb on + strand, within HP15_p187g119at 120.782 kb on - strand, within HP15_p187g119at 120.782 kb on - strand, within HP15_p187g119at 120.789 kb on + strand, within HP15_p187g119at 120.834 kb on - strand, within HP15_p187g119at 120.866 kb on + strand, within HP15_p187g119at 120.866 kb on + strand, within HP15_p187g119at 120.886 kb on + strand, within HP15_p187g119at 120.886 kb on + strand, within HP15_p187g119at 120.966 kb on + strand, within HP15_p187g119

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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117,972 - HP15_p187g117 0.35 -0.3
117,982 - HP15_p187g117 0.36 +2.4
117,994 + HP15_p187g117 0.37 +2.2
117,994 + HP15_p187g117 0.37 +0.0
118,002 - HP15_p187g117 0.37 -0.3
118,002 - HP15_p187g117 0.37 +0.8
118,027 + HP15_p187g117 0.39 +0.6
118,027 + HP15_p187g117 0.39 -0.7
118,052 + HP15_p187g117 0.41 +0.1
118,052 + HP15_p187g117 0.41 +0.1
118,060 - HP15_p187g117 0.42 -1.0
118,060 - HP15_p187g117 0.42 +2.6
118,088 - HP15_p187g117 0.44 -1.9
118,110 + HP15_p187g117 0.46 -0.6
118,111 + HP15_p187g117 0.46 +0.4
118,120 + HP15_p187g117 0.47 -0.9
118,158 + HP15_p187g117 0.50 +0.8
118,163 + HP15_p187g117 0.50 -1.1
118,163 + HP15_p187g117 0.50 -0.4
118,163 + HP15_p187g117 0.50 -0.8
118,163 + HP15_p187g117 0.50 -2.2
118,163 + HP15_p187g117 0.50 +0.5
118,163 + HP15_p187g117 0.50 +0.0
118,163 + HP15_p187g117 0.50 -0.7
118,163 + HP15_p187g117 0.50 +0.2
118,163 + HP15_p187g117 0.50 -0.3
118,163 + HP15_p187g117 0.50 +0.1
118,163 + HP15_p187g117 0.50 -0.1
118,163 + HP15_p187g117 0.50 -0.7
118,163 + HP15_p187g117 0.50 -0.9
118,171 - HP15_p187g117 0.51 +1.8
118,171 - HP15_p187g117 0.51 +0.8
118,171 - HP15_p187g117 0.51 -0.0
118,171 - HP15_p187g117 0.51 -0.1
118,171 - HP15_p187g117 0.51 -0.6
118,171 - HP15_p187g117 0.51 +0.3
118,171 - HP15_p187g117 0.51 +0.4
118,171 - HP15_p187g117 0.51 -0.6
118,171 - HP15_p187g117 0.51 -0.8
118,171 - HP15_p187g117 0.51 +0.6
118,171 - HP15_p187g117 0.51 +0.6
118,171 - HP15_p187g117 0.51 +0.6
118,171 - HP15_p187g117 0.51 -1.2
118,171 - HP15_p187g117 0.51 +1.3
118,171 - HP15_p187g117 0.51 -1.4
118,171 - HP15_p187g117 0.51 -0.6
118,171 - HP15_p187g117 0.51 -0.9
118,171 - HP15_p187g117 0.51 -0.5
118,252 + HP15_p187g117 0.57 +0.2
118,338 - HP15_p187g117 0.64 -2.2
118,398 + HP15_p187g117 0.69 +0.3
118,417 - HP15_p187g117 0.70 -1.0
118,437 - HP15_p187g117 0.72 -1.3
118,449 - HP15_p187g117 0.73 -0.0
118,455 - HP15_p187g117 0.73 -1.0
118,466 - HP15_p187g117 0.74 +1.4
118,466 - HP15_p187g117 0.74 -0.6
118,466 - HP15_p187g117 0.74 -0.2
118,472 + HP15_p187g117 0.75 -1.8
118,480 - HP15_p187g117 0.75 +0.7
118,480 - HP15_p187g117 0.75 -0.2
118,487 - HP15_p187g117 0.76 -0.1
118,487 - HP15_p187g117 0.76 -2.9
118,501 + HP15_p187g117 0.77 +0.5
118,502 + HP15_p187g117 0.77 -2.9
118,502 + HP15_p187g117 0.77 -1.6
118,529 + HP15_p187g117 0.79 -0.8
118,532 - HP15_p187g117 0.80 -0.2
118,549 - HP15_p187g117 0.81 -1.5
118,641 - HP15_p187g117 0.88 +0.0
118,646 - HP15_p187g117 0.89 -0.9
118,656 - HP15_p187g117 0.89 +0.4
118,656 - HP15_p187g117 0.89 -0.2
118,683 - -0.2
118,723 - -0.6
118,747 - +0.4
118,766 - +0.9
118,776 - -1.6
118,778 - -0.4
118,817 + +1.7
118,934 - HP15_p187g118 0.11 +0.3
118,948 + HP15_p187g118 0.12 +0.2
119,050 + HP15_p187g118 0.21 -0.3
119,066 + HP15_p187g118 0.22 +0.2
119,072 + HP15_p187g118 0.22 +0.6
119,074 - HP15_p187g118 0.23 -0.4
119,074 - HP15_p187g118 0.23 -0.5
119,091 + HP15_p187g118 0.24 +0.8
119,098 - HP15_p187g118 0.25 +2.6
119,098 - HP15_p187g118 0.25 -0.5
119,098 - HP15_p187g118 0.25 +0.2
119,098 - HP15_p187g118 0.25 -1.0
119,140 - HP15_p187g118 0.28 +1.1
119,154 + HP15_p187g118 0.30 +0.5
119,247 - HP15_p187g118 0.38 +0.9
119,303 + HP15_p187g118 0.42 +0.0
119,333 - HP15_p187g118 0.45 +0.8
119,407 - HP15_p187g118 0.51 +0.5
119,483 - HP15_p187g118 0.58 +1.4
119,490 - HP15_p187g118 0.58 -0.9
119,511 + HP15_p187g118 0.60 +0.8
119,531 - HP15_p187g118 0.62 -1.0
119,595 + HP15_p187g118 0.68 +0.9
119,605 + HP15_p187g118 0.68 +0.9
119,613 + HP15_p187g118 0.69 +2.4
119,613 + HP15_p187g118 0.69 +1.5
119,658 + HP15_p187g118 0.73 -0.0
119,659 - HP15_p187g118 0.73 -1.2
119,663 + HP15_p187g118 0.73 +1.4
119,663 + HP15_p187g118 0.73 +1.8
119,673 + HP15_p187g118 0.74 -0.9
119,673 + HP15_p187g118 0.74 +0.2
119,725 + HP15_p187g118 0.79 +0.8
119,727 + HP15_p187g118 0.79 +0.3
119,727 + HP15_p187g118 0.79 -2.2
119,735 - HP15_p187g118 0.80 +0.3
119,739 + HP15_p187g118 0.80 +0.6
119,747 - HP15_p187g118 0.81 +1.0
119,757 - HP15_p187g118 0.81 -0.1
119,809 - HP15_p187g118 0.86 +1.3
120,117 + -1.0
120,117 + -0.0
120,117 + -0.2
120,117 + +0.8
120,117 + -0.9
120,125 - -0.1
120,125 - -0.1
120,127 + -0.0
120,256 + -1.2
120,258 + -0.3
120,272 + -1.0
120,280 - -0.1
120,287 + -0.6
120,295 - +0.4
120,306 + -0.3
120,319 - -0.3
120,319 - +0.3
120,322 - -1.6
120,332 + -0.1
120,392 + +0.5
120,398 - +1.2
120,405 + +0.4
120,413 - -0.5
120,413 - +0.5
120,464 - HP15_p187g119 0.10 +0.1
120,471 - HP15_p187g119 0.11 -0.2
120,492 + HP15_p187g119 0.12 +0.2
120,522 + HP15_p187g119 0.14 -0.9
120,532 - HP15_p187g119 0.14 +0.6
120,538 + HP15_p187g119 0.15 +0.4
120,559 - HP15_p187g119 0.16 +0.2
120,559 - HP15_p187g119 0.16 -1.2
120,559 - HP15_p187g119 0.16 -0.2
120,567 - HP15_p187g119 0.16 -0.9
120,574 + HP15_p187g119 0.17 -0.9
120,574 + HP15_p187g119 0.17 -3.4
120,582 - HP15_p187g119 0.17 +1.3
120,582 - HP15_p187g119 0.17 -0.6
120,604 - HP15_p187g119 0.19 -1.2
120,614 + HP15_p187g119 0.19 -1.3
120,634 - HP15_p187g119 0.21 +0.4
120,663 - HP15_p187g119 0.22 +0.0
120,707 + HP15_p187g119 0.25 +0.5
120,715 - HP15_p187g119 0.26 +0.6
120,759 + HP15_p187g119 0.28 +0.1
120,774 + HP15_p187g119 0.29 -0.3
120,782 - HP15_p187g119 0.30 -0.3
120,782 - HP15_p187g119 0.30 -0.6
120,789 + HP15_p187g119 0.30 -0.3
120,834 - HP15_p187g119 0.33 +0.4
120,866 + HP15_p187g119 0.35 +0.6
120,866 + HP15_p187g119 0.35 +0.4
120,886 + HP15_p187g119 0.36 +1.2
120,886 + HP15_p187g119 0.36 -1.6
120,966 + HP15_p187g119 0.41 +0.4

Or see this region's nucleotide sequence