Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3720 and HP15_3721 overlap by 4 nucleotides HP15_3721 and HP15_3722 are separated by 76 nucleotides HP15_3722 and HP15_3723 are separated by 519 nucleotides
HP15_3720: HP15_3720 - DNA damage response nuclease (from data) , at 3,933,962 to 3,935,671
_3720
HP15_3721: HP15_3721 - Rad3-related DNA helicase, at 3,935,668 to 3,937,965
_3721
HP15_3722: HP15_3722 - hypothetical protein, at 3,938,042 to 3,938,428
_3722
HP15_3723: HP15_3723 - PTS system, glucose-specific EIIA/HPr/phosphoenolpyruvate-protein phosphotransferase components, at 3,938,948 to 3,941,884
_3723
Position (kb)
3935
3936
3937
3938 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3934.670 kb on + strand, within HP15_3720 at 3934.673 kb on - strand, within HP15_3720 at 3934.881 kb on - strand, within HP15_3720 at 3934.920 kb on + strand, within HP15_3720 at 3934.920 kb on + strand, within HP15_3720 at 3934.943 kb on + strand, within HP15_3720 at 3935.039 kb on - strand, within HP15_3720 at 3935.055 kb on - strand, within HP15_3720 at 3935.055 kb on - strand, within HP15_3720 at 3935.060 kb on - strand, within HP15_3720 at 3935.081 kb on + strand, within HP15_3720 at 3935.132 kb on + strand, within HP15_3720 at 3935.236 kb on - strand, within HP15_3720 at 3935.236 kb on - strand, within HP15_3720 at 3935.243 kb on + strand, within HP15_3720 at 3935.280 kb on + strand, within HP15_3720 at 3935.339 kb on + strand, within HP15_3720 at 3935.339 kb on + strand, within HP15_3720 at 3935.349 kb on + strand, within HP15_3720 at 3935.349 kb on + strand, within HP15_3720 at 3935.349 kb on + strand, within HP15_3720 at 3935.349 kb on + strand, within HP15_3720 at 3935.349 kb on + strand, within HP15_3720 at 3935.397 kb on + strand, within HP15_3720 at 3935.402 kb on + strand, within HP15_3720 at 3935.402 kb on + strand, within HP15_3720 at 3935.410 kb on - strand, within HP15_3720 at 3935.410 kb on - strand, within HP15_3720 at 3935.412 kb on + strand, within HP15_3720 at 3935.463 kb on + strand, within HP15_3720 at 3935.550 kb on - strand at 3935.556 kb on + strand at 3935.617 kb on - strand at 3935.713 kb on + strand at 3935.753 kb on + strand at 3935.761 kb on - strand at 3935.845 kb on + strand at 3935.918 kb on + strand, within HP15_3721 at 3935.986 kb on + strand, within HP15_3721 at 3935.989 kb on + strand, within HP15_3721 at 3935.999 kb on - strand, within HP15_3721 at 3936.025 kb on - strand, within HP15_3721 at 3936.109 kb on + strand, within HP15_3721 at 3936.143 kb on - strand, within HP15_3721 at 3936.143 kb on - strand, within HP15_3721 at 3936.143 kb on - strand, within HP15_3721 at 3936.161 kb on + strand, within HP15_3721 at 3936.171 kb on + strand, within HP15_3721 at 3936.183 kb on + strand, within HP15_3721 at 3936.183 kb on + strand, within HP15_3721 at 3936.226 kb on - strand, within HP15_3721 at 3936.293 kb on + strand, within HP15_3721 at 3936.301 kb on - strand, within HP15_3721 at 3936.311 kb on - strand, within HP15_3721 at 3936.369 kb on + strand, within HP15_3721 at 3936.429 kb on + strand, within HP15_3721 at 3936.450 kb on + strand, within HP15_3721 at 3936.453 kb on - strand, within HP15_3721 at 3936.453 kb on - strand, within HP15_3721 at 3936.458 kb on - strand, within HP15_3721 at 3936.458 kb on - strand, within HP15_3721 at 3936.458 kb on - strand, within HP15_3721 at 3936.475 kb on - strand, within HP15_3721 at 3936.761 kb on + strand, within HP15_3721 at 3936.761 kb on + strand, within HP15_3721 at 3936.785 kb on + strand, within HP15_3721 at 3936.798 kb on + strand, within HP15_3721 at 3936.946 kb on + strand, within HP15_3721 at 3936.954 kb on - strand, within HP15_3721 at 3937.118 kb on + strand, within HP15_3721 at 3937.155 kb on - strand, within HP15_3721 at 3937.246 kb on + strand, within HP15_3721 at 3937.309 kb on + strand, within HP15_3721 at 3937.350 kb on + strand, within HP15_3721 at 3937.398 kb on - strand, within HP15_3721 at 3937.563 kb on - strand, within HP15_3721 at 3937.594 kb on + strand, within HP15_3721 at 3937.611 kb on - strand, within HP15_3721 at 3937.618 kb on + strand, within HP15_3721 at 3937.622 kb on + strand, within HP15_3721 at 3937.625 kb on - strand, within HP15_3721 at 3937.695 kb on - strand, within HP15_3721 at 3937.724 kb on + strand, within HP15_3721 at 3937.765 kb on + strand at 3937.829 kb on + strand at 3937.928 kb on + strand at 3937.928 kb on - strand at 3938.020 kb on + strand at 3938.069 kb on - strand at 3938.174 kb on - strand, within HP15_3722 at 3938.174 kb on - strand, within HP15_3722 at 3938.195 kb on - strand, within HP15_3722 at 3938.195 kb on - strand, within HP15_3722 at 3938.253 kb on - strand, within HP15_3722 at 3938.274 kb on + strand, within HP15_3722 at 3938.282 kb on - strand, within HP15_3722 at 3938.295 kb on - strand, within HP15_3722 at 3938.322 kb on - strand, within HP15_3722 at 3938.322 kb on - strand, within HP15_3722 at 3938.398 kb on + strand at 3938.398 kb on + strand at 3938.424 kb on + strand at 3938.456 kb on - strand at 3938.657 kb on - strand at 3938.742 kb on + strand at 3938.750 kb on - strand at 3938.750 kb on - strand at 3938.822 kb on + strand at 3938.957 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,934,670 + HP15_3720 0.41 -0.0 3,934,673 - HP15_3720 0.42 -1.0 3,934,881 - HP15_3720 0.54 -0.8 3,934,920 + HP15_3720 0.56 -0.3 3,934,920 + HP15_3720 0.56 -0.5 3,934,943 + HP15_3720 0.57 -0.4 3,935,039 - HP15_3720 0.63 +1.1 3,935,055 - HP15_3720 0.64 -0.5 3,935,055 - HP15_3720 0.64 -0.6 3,935,060 - HP15_3720 0.64 -1.2 3,935,081 + HP15_3720 0.65 -1.2 3,935,132 + HP15_3720 0.68 -0.7 3,935,236 - HP15_3720 0.75 -1.5 3,935,236 - HP15_3720 0.75 -0.7 3,935,243 + HP15_3720 0.75 -0.6 3,935,280 + HP15_3720 0.77 -1.8 3,935,339 + HP15_3720 0.81 -1.2 3,935,339 + HP15_3720 0.81 -0.8 3,935,349 + HP15_3720 0.81 -1.7 3,935,349 + HP15_3720 0.81 -0.9 3,935,349 + HP15_3720 0.81 +0.3 3,935,349 + HP15_3720 0.81 -1.7 3,935,349 + HP15_3720 0.81 -0.9 3,935,397 + HP15_3720 0.84 +0.3 3,935,402 + HP15_3720 0.84 +1.1 3,935,402 + HP15_3720 0.84 -1.3 3,935,410 - HP15_3720 0.85 -0.5 3,935,410 - HP15_3720 0.85 -1.2 3,935,412 + HP15_3720 0.85 -2.9 3,935,463 + HP15_3720 0.88 -1.5 3,935,550 - -1.3 3,935,556 + -1.8 3,935,617 - -1.5 3,935,713 + +0.4 3,935,753 + -2.3 3,935,761 - -0.1 3,935,845 + +0.1 3,935,918 + HP15_3721 0.11 -1.1 3,935,986 + HP15_3721 0.14 -1.1 3,935,989 + HP15_3721 0.14 -0.5 3,935,999 - HP15_3721 0.14 -0.2 3,936,025 - HP15_3721 0.16 -0.5 3,936,109 + HP15_3721 0.19 +0.1 3,936,143 - HP15_3721 0.21 -0.5 3,936,143 - HP15_3721 0.21 +0.3 3,936,143 - HP15_3721 0.21 -1.3 3,936,161 + HP15_3721 0.21 -1.1 3,936,171 + HP15_3721 0.22 +1.2 3,936,183 + HP15_3721 0.22 -0.9 3,936,183 + HP15_3721 0.22 -1.7 3,936,226 - HP15_3721 0.24 -0.0 3,936,293 + HP15_3721 0.27 -0.3 3,936,301 - HP15_3721 0.28 -1.5 3,936,311 - HP15_3721 0.28 -1.0 3,936,369 + HP15_3721 0.31 -3.5 3,936,429 + HP15_3721 0.33 -0.6 3,936,450 + HP15_3721 0.34 -0.5 3,936,453 - HP15_3721 0.34 -0.5 3,936,453 - HP15_3721 0.34 -0.8 3,936,458 - HP15_3721 0.34 +0.1 3,936,458 - HP15_3721 0.34 +0.1 3,936,458 - HP15_3721 0.34 -1.6 3,936,475 - HP15_3721 0.35 -0.6 3,936,761 + HP15_3721 0.48 +2.7 3,936,761 + HP15_3721 0.48 -0.2 3,936,785 + HP15_3721 0.49 +1.5 3,936,798 + HP15_3721 0.49 +0.3 3,936,946 + HP15_3721 0.56 -1.2 3,936,954 - HP15_3721 0.56 -1.3 3,937,118 + HP15_3721 0.63 -1.3 3,937,155 - HP15_3721 0.65 +0.4 3,937,246 + HP15_3721 0.69 -0.9 3,937,309 + HP15_3721 0.71 -0.9 3,937,350 + HP15_3721 0.73 -0.2 3,937,398 - HP15_3721 0.75 -1.4 3,937,563 - HP15_3721 0.82 -0.2 3,937,594 + HP15_3721 0.84 -1.3 3,937,611 - HP15_3721 0.85 -1.5 3,937,618 + HP15_3721 0.85 +0.1 3,937,622 + HP15_3721 0.85 -0.1 3,937,625 - HP15_3721 0.85 +0.0 3,937,695 - HP15_3721 0.88 -2.7 3,937,724 + HP15_3721 0.89 +0.4 3,937,765 + -0.4 3,937,829 + -0.8 3,937,928 + +0.6 3,937,928 - -1.9 3,938,020 + +0.6 3,938,069 - +0.0 3,938,174 - HP15_3722 0.34 -0.4 3,938,174 - HP15_3722 0.34 +0.2 3,938,195 - HP15_3722 0.40 -0.8 3,938,195 - HP15_3722 0.40 -0.4 3,938,253 - HP15_3722 0.55 -0.4 3,938,274 + HP15_3722 0.60 +0.4 3,938,282 - HP15_3722 0.62 +0.2 3,938,295 - HP15_3722 0.65 +0.3 3,938,322 - HP15_3722 0.72 +0.5 3,938,322 - HP15_3722 0.72 -1.6 3,938,398 + +0.6 3,938,398 + -0.7 3,938,424 + +0.1 3,938,456 - -0.1 3,938,657 - +0.1 3,938,742 + +0.1 3,938,750 - -0.7 3,938,750 - +1.2 3,938,822 + -1.3 3,938,957 + -0.2
Or see this region's nucleotide sequence