Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3535 and HP15_3536 are separated by 232 nucleotides HP15_3536 and HP15_3537 are separated by 584 nucleotides HP15_3537 and HP15_3538 are separated by 461 nucleotides
HP15_3535: HP15_3535 - hypothetical protein, at 3,722,390 to 3,722,674
_3535
HP15_3536: HP15_3536 - hypothetical protein, at 3,722,907 to 3,723,029
_3536
HP15_3537: HP15_3537 - protein containing RNA polymerase sigma-70 domain, at 3,723,614 to 3,724,159
_3537
HP15_3538: HP15_3538 - methyl-accepting chemotaxis sensory transducer, at 3,724,621 to 3,726,297
_3538
Position (kb)
3723
3724
3725 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 3722.632 kb on - strand, within HP15_3535 at 3722.760 kb on - strand at 3722.768 kb on - strand at 3722.828 kb on - strand at 3722.899 kb on + strand at 3722.913 kb on + strand at 3722.988 kb on + strand, within HP15_3536 at 3723.024 kb on + strand at 3723.034 kb on + strand at 3723.137 kb on + strand at 3723.169 kb on + strand at 3723.174 kb on + strand at 3723.188 kb on - strand at 3723.219 kb on - strand at 3723.260 kb on + strand at 3723.342 kb on + strand at 3723.342 kb on + strand at 3723.350 kb on - strand at 3723.505 kb on + strand at 3723.505 kb on + strand at 3723.523 kb on - strand at 3723.560 kb on + strand at 3723.579 kb on - strand at 3723.631 kb on + strand at 3723.636 kb on + strand at 3723.636 kb on + strand at 3723.636 kb on + strand at 3723.636 kb on + strand at 3723.760 kb on - strand, within HP15_3537 at 3723.762 kb on + strand, within HP15_3537 at 3723.770 kb on - strand, within HP15_3537 at 3723.772 kb on - strand, within HP15_3537 at 3723.778 kb on - strand, within HP15_3537 at 3723.780 kb on - strand, within HP15_3537 at 3723.979 kb on - strand, within HP15_3537 at 3723.979 kb on - strand, within HP15_3537 at 3723.981 kb on + strand, within HP15_3537 at 3723.981 kb on + strand, within HP15_3537 at 3723.989 kb on - strand, within HP15_3537 at 3724.018 kb on + strand, within HP15_3537 at 3724.025 kb on + strand, within HP15_3537 at 3724.026 kb on - strand, within HP15_3537 at 3724.026 kb on - strand, within HP15_3537 at 3724.033 kb on - strand, within HP15_3537 at 3724.033 kb on - strand, within HP15_3537 at 3724.109 kb on + strand at 3724.125 kb on + strand at 3724.133 kb on - strand at 3724.218 kb on + strand at 3724.218 kb on + strand at 3724.226 kb on - strand at 3724.226 kb on - strand at 3724.227 kb on + strand at 3724.227 kb on + strand at 3724.232 kb on + strand at 3724.240 kb on - strand at 3724.267 kb on + strand at 3724.267 kb on + strand at 3724.275 kb on - strand at 3724.275 kb on - strand at 3724.275 kb on - strand at 3724.275 kb on - strand at 3724.275 kb on - strand at 3724.312 kb on - strand at 3724.322 kb on + strand at 3724.365 kb on + strand at 3724.494 kb on - strand at 3724.494 kb on - strand at 3724.566 kb on + strand at 3724.714 kb on + strand at 3724.714 kb on - strand at 3724.755 kb on - strand at 3724.777 kb on - strand at 3724.850 kb on + strand, within HP15_3538 at 3724.872 kb on + strand, within HP15_3538 at 3724.880 kb on - strand, within HP15_3538 at 3724.921 kb on + strand, within HP15_3538 at 3724.961 kb on - strand, within HP15_3538 at 3724.961 kb on - strand, within HP15_3538 at 3724.998 kb on + strand, within HP15_3538 at 3725.108 kb on - strand, within HP15_3538 at 3725.144 kb on - strand, within HP15_3538
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,722,632 - HP15_3535 0.85 +0.5 3,722,760 - -0.1 3,722,768 - -1.2 3,722,828 - +0.8 3,722,899 + +1.3 3,722,913 + +1.5 3,722,988 + HP15_3536 0.66 +2.6 3,723,024 + +3.7 3,723,034 + +3.5 3,723,137 + +3.3 3,723,169 + +3.9 3,723,174 + +2.8 3,723,188 - -0.1 3,723,219 - +0.7 3,723,260 + +3.6 3,723,342 + +5.6 3,723,342 + +3.8 3,723,350 - +0.7 3,723,505 + +2.6 3,723,505 + +1.4 3,723,523 - -1.7 3,723,560 + -1.4 3,723,579 - +0.1 3,723,631 + -2.4 3,723,636 + +0.4 3,723,636 + -1.4 3,723,636 + -1.3 3,723,636 + +0.4 3,723,760 - HP15_3537 0.27 -1.5 3,723,762 + HP15_3537 0.27 -1.9 3,723,770 - HP15_3537 0.29 -0.8 3,723,772 - HP15_3537 0.29 -3.1 3,723,778 - HP15_3537 0.30 -1.5 3,723,780 - HP15_3537 0.30 -1.3 3,723,979 - HP15_3537 0.67 -0.7 3,723,979 - HP15_3537 0.67 -1.2 3,723,981 + HP15_3537 0.67 -1.5 3,723,981 + HP15_3537 0.67 -1.9 3,723,989 - HP15_3537 0.69 -1.3 3,724,018 + HP15_3537 0.74 -0.4 3,724,025 + HP15_3537 0.75 -0.9 3,724,026 - HP15_3537 0.75 -1.3 3,724,026 - HP15_3537 0.75 -1.2 3,724,033 - HP15_3537 0.77 -0.9 3,724,033 - HP15_3537 0.77 -1.6 3,724,109 + -2.3 3,724,125 + +0.1 3,724,133 - -1.0 3,724,218 + +0.1 3,724,218 + -2.7 3,724,226 - -0.8 3,724,226 - -0.3 3,724,227 + -1.3 3,724,227 + -1.3 3,724,232 + -1.1 3,724,240 - -0.6 3,724,267 + -2.3 3,724,267 + -2.3 3,724,275 - -0.9 3,724,275 - -0.9 3,724,275 - -2.1 3,724,275 - -0.6 3,724,275 - -1.9 3,724,312 - -0.1 3,724,322 + -0.1 3,724,365 + -0.4 3,724,494 - +0.3 3,724,494 - -0.3 3,724,566 + -0.4 3,724,714 + -0.5 3,724,714 - -0.6 3,724,755 - -0.1 3,724,777 - +0.6 3,724,850 + HP15_3538 0.14 -0.3 3,724,872 + HP15_3538 0.15 +1.7 3,724,880 - HP15_3538 0.15 -0.4 3,724,921 + HP15_3538 0.18 +1.3 3,724,961 - HP15_3538 0.20 -0.2 3,724,961 - HP15_3538 0.20 -0.6 3,724,998 + HP15_3538 0.22 -0.0 3,725,108 - HP15_3538 0.29 +0.7 3,725,144 - HP15_3538 0.31 -0.7
Or see this region's nucleotide sequence