Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_278 and HP15_279 are separated by 17 nucleotides HP15_279 and HP15_280 are separated by 17 nucleotides HP15_280 and HP15_281 are separated by 89 nucleotides HP15_281 and HP15_282 are separated by 6 nucleotides
HP15_278: HP15_278 - tRNA (guanine-N(7)-)-methyltransferase, at 270,022 to 270,753
_278
HP15_279: HP15_279 - conserved hypothetical protein, membrane, at 270,771 to 271,286
_279
HP15_280: HP15_280 - putative oxygen-independent coproporphyrinogen III oxidase, at 271,304 to 272,386
_280
HP15_281: HP15_281 - non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family, at 272,476 to 273,075
_281
HP15_282: HP15_282 - conserved hypothetical protein, secreted, at 273,082 to 273,537
_282
Position (kb) 271
272
273 Strain fitness (log2 ratio) -2
-1
0
1 at 270.324 kb on + strand, within HP15_278 at 270.342 kb on + strand, within HP15_278 at 270.397 kb on - strand, within HP15_278 at 270.458 kb on + strand, within HP15_278 at 270.520 kb on - strand, within HP15_278 at 270.536 kb on + strand, within HP15_278 at 270.537 kb on + strand, within HP15_278 at 270.770 kb on - strand at 270.775 kb on - strand at 270.855 kb on - strand, within HP15_279 at 270.866 kb on + strand, within HP15_279 at 270.876 kb on - strand, within HP15_279 at 270.878 kb on + strand, within HP15_279 at 270.926 kb on + strand, within HP15_279 at 270.934 kb on + strand, within HP15_279 at 270.965 kb on + strand, within HP15_279 at 271.150 kb on + strand, within HP15_279 at 271.184 kb on - strand, within HP15_279 at 271.184 kb on - strand, within HP15_279 at 271.221 kb on - strand, within HP15_279 at 271.435 kb on - strand, within HP15_280 at 271.536 kb on - strand, within HP15_280 at 271.536 kb on - strand, within HP15_280 at 271.830 kb on + strand, within HP15_280 at 271.880 kb on + strand, within HP15_280 at 271.880 kb on + strand, within HP15_280 at 271.880 kb on + strand, within HP15_280 at 271.880 kb on + strand, within HP15_280 at 271.880 kb on - strand, within HP15_280 at 271.880 kb on - strand, within HP15_280 at 271.898 kb on - strand, within HP15_280 at 272.062 kb on - strand, within HP15_280 at 272.168 kb on + strand, within HP15_280 at 272.233 kb on - strand, within HP15_280 at 272.395 kb on - strand at 272.396 kb on - strand at 272.479 kb on + strand at 272.486 kb on + strand at 272.636 kb on - strand, within HP15_281 at 272.636 kb on - strand, within HP15_281 at 272.654 kb on - strand, within HP15_281 at 272.716 kb on + strand, within HP15_281 at 272.790 kb on - strand, within HP15_281 at 273.079 kb on + strand at 273.087 kb on - strand at 273.104 kb on - strand at 273.105 kb on - strand at 273.134 kb on - strand, within HP15_282 at 273.282 kb on - strand, within HP15_282 at 273.350 kb on + strand, within HP15_282 at 273.354 kb on - strand, within HP15_282 at 273.379 kb on - strand, within HP15_282
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 270,324 + HP15_278 0.41 -0.6 270,342 + HP15_278 0.44 -0.5 270,397 - HP15_278 0.51 -0.8 270,458 + HP15_278 0.60 -1.2 270,520 - HP15_278 0.68 -0.6 270,536 + HP15_278 0.70 -0.7 270,537 + HP15_278 0.70 -1.1 270,770 - -0.2 270,775 - +0.5 270,855 - HP15_279 0.16 -0.1 270,866 + HP15_279 0.18 -0.1 270,876 - HP15_279 0.20 -1.5 270,878 + HP15_279 0.21 +0.5 270,926 + HP15_279 0.30 -0.4 270,934 + HP15_279 0.32 +0.8 270,965 + HP15_279 0.38 -0.5 271,150 + HP15_279 0.73 -0.5 271,184 - HP15_279 0.80 +0.0 271,184 - HP15_279 0.80 +0.2 271,221 - HP15_279 0.87 -0.4 271,435 - HP15_280 0.12 +0.1 271,536 - HP15_280 0.21 +0.0 271,536 - HP15_280 0.21 +0.9 271,830 + HP15_280 0.49 +0.0 271,880 + HP15_280 0.53 +1.6 271,880 + HP15_280 0.53 +0.0 271,880 + HP15_280 0.53 +1.7 271,880 + HP15_280 0.53 +1.6 271,880 - HP15_280 0.53 -0.5 271,880 - HP15_280 0.53 +0.8 271,898 - HP15_280 0.55 -2.0 272,062 - HP15_280 0.70 -0.4 272,168 + HP15_280 0.80 +0.3 272,233 - HP15_280 0.86 -0.4 272,395 - +0.5 272,396 - -0.0 272,479 + +0.1 272,486 + +1.4 272,636 - HP15_281 0.27 +0.8 272,636 - HP15_281 0.27 -0.4 272,654 - HP15_281 0.30 +0.6 272,716 + HP15_281 0.40 +0.2 272,790 - HP15_281 0.52 +1.0 273,079 + +0.1 273,087 - -1.2 273,104 - +1.0 273,105 - -0.1 273,134 - HP15_282 0.11 +0.7 273,282 - HP15_282 0.44 -0.1 273,350 + HP15_282 0.59 -1.1 273,354 - HP15_282 0.60 +1.0 273,379 - HP15_282 0.65 -0.5
Or see this region's nucleotide sequence