Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2662 and HP15_2663 overlap by 4 nucleotides HP15_2663 and HP15_2664 are separated by 18 nucleotides HP15_2664 and HP15_2665 are separated by 69 nucleotides HP15_2665 and HP15_2666 are separated by 10 nucleotides HP15_2666 and HP15_2667 are separated by 97 nucleotides
HP15_2662: HP15_2662 - two-component sensor histidine kinase, at 2,811,938 to 2,813,557
_2662
HP15_2663: HP15_2663 - response regulator receiver and unknown domain protein, at 2,813,554 to 2,814,249
_2663
HP15_2664: HP15_2664 - peptidase M48, Ste24p, at 2,814,268 to 2,815,059
_2664
HP15_2665: HP15_2665 - conserved hypothetical protein, membrane, at 2,815,129 to 2,815,641
_2665
HP15_2666: HP15_2666 - membrane protein, at 2,815,652 to 2,815,930
_2666
HP15_2667: HP15_2667 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein, at 2,816,028 to 2,816,810
_2667
Position (kb)
2814
2815
2816 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5 at 2813.294 kb on - strand, within HP15_2662 at 2813.400 kb on + strand at 2813.401 kb on - strand at 2813.424 kb on + strand at 2813.432 kb on - strand at 2813.458 kb on + strand at 2813.458 kb on + strand at 2813.458 kb on + strand at 2813.466 kb on - strand at 2813.480 kb on + strand at 2813.521 kb on - strand at 2813.521 kb on - strand at 2813.521 kb on - strand at 2813.521 kb on - strand at 2813.521 kb on - strand at 2813.521 kb on - strand at 2813.772 kb on - strand, within HP15_2663 at 2813.818 kb on + strand, within HP15_2663 at 2813.818 kb on + strand, within HP15_2663 at 2813.832 kb on - strand, within HP15_2663 at 2813.912 kb on + strand, within HP15_2663 at 2813.912 kb on + strand, within HP15_2663 at 2813.920 kb on - strand, within HP15_2663 at 2813.979 kb on + strand, within HP15_2663 at 2814.264 kb on - strand at 2814.367 kb on + strand, within HP15_2664 at 2814.382 kb on + strand, within HP15_2664 at 2814.392 kb on + strand, within HP15_2664 at 2814.446 kb on + strand, within HP15_2664 at 2814.446 kb on + strand, within HP15_2664 at 2814.446 kb on + strand, within HP15_2664 at 2814.446 kb on + strand, within HP15_2664 at 2814.454 kb on - strand, within HP15_2664 at 2814.456 kb on + strand, within HP15_2664 at 2814.464 kb on - strand, within HP15_2664 at 2814.468 kb on + strand, within HP15_2664 at 2814.469 kb on + strand, within HP15_2664 at 2814.477 kb on - strand, within HP15_2664 at 2814.484 kb on + strand, within HP15_2664 at 2814.553 kb on + strand, within HP15_2664 at 2814.568 kb on - strand, within HP15_2664 at 2814.703 kb on - strand, within HP15_2664 at 2814.770 kb on - strand, within HP15_2664 at 2814.777 kb on + strand, within HP15_2664 at 2814.878 kb on + strand, within HP15_2664 at 2814.896 kb on + strand, within HP15_2664 at 2814.904 kb on - strand, within HP15_2664 at 2815.056 kb on - strand at 2815.082 kb on - strand at 2815.165 kb on - strand at 2815.165 kb on - strand at 2815.212 kb on + strand, within HP15_2665 at 2815.264 kb on - strand, within HP15_2665 at 2815.418 kb on + strand, within HP15_2665 at 2815.452 kb on + strand, within HP15_2665 at 2815.452 kb on + strand, within HP15_2665 at 2815.452 kb on + strand, within HP15_2665 at 2815.460 kb on - strand, within HP15_2665 at 2815.460 kb on - strand, within HP15_2665 at 2815.460 kb on - strand, within HP15_2665 at 2815.460 kb on - strand, within HP15_2665 at 2815.486 kb on - strand, within HP15_2665 at 2815.588 kb on + strand, within HP15_2665 at 2815.745 kb on + strand, within HP15_2666 at 2815.943 kb on + strand at 2816.024 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,813,294 - HP15_2662 0.84 +1.3 2,813,400 + -0.1 2,813,401 - +1.6 2,813,424 + +0.1 2,813,432 - +0.9 2,813,458 + +0.7 2,813,458 + +0.4 2,813,458 + +0.6 2,813,466 - +0.7 2,813,480 + -1.1 2,813,521 - +0.7 2,813,521 - +0.7 2,813,521 - -1.0 2,813,521 - +1.3 2,813,521 - +1.2 2,813,521 - +1.3 2,813,772 - HP15_2663 0.31 +0.7 2,813,818 + HP15_2663 0.38 +1.5 2,813,818 + HP15_2663 0.38 +1.1 2,813,832 - HP15_2663 0.40 +1.7 2,813,912 + HP15_2663 0.51 -0.3 2,813,912 + HP15_2663 0.51 +0.7 2,813,920 - HP15_2663 0.53 +0.7 2,813,979 + HP15_2663 0.61 +4.8 2,814,264 - -0.6 2,814,367 + HP15_2664 0.12 +0.1 2,814,382 + HP15_2664 0.14 +0.3 2,814,392 + HP15_2664 0.16 +0.1 2,814,446 + HP15_2664 0.22 +0.4 2,814,446 + HP15_2664 0.22 +0.2 2,814,446 + HP15_2664 0.22 +0.1 2,814,446 + HP15_2664 0.22 +0.2 2,814,454 - HP15_2664 0.23 +0.7 2,814,456 + HP15_2664 0.24 -0.9 2,814,464 - HP15_2664 0.25 +0.8 2,814,468 + HP15_2664 0.25 -1.0 2,814,469 + HP15_2664 0.25 +0.5 2,814,477 - HP15_2664 0.26 -0.5 2,814,484 + HP15_2664 0.27 +0.5 2,814,553 + HP15_2664 0.36 +0.3 2,814,568 - HP15_2664 0.38 -0.9 2,814,703 - HP15_2664 0.55 +0.4 2,814,770 - HP15_2664 0.63 -1.5 2,814,777 + HP15_2664 0.64 +0.5 2,814,878 + HP15_2664 0.77 +0.4 2,814,896 + HP15_2664 0.79 +0.4 2,814,904 - HP15_2664 0.80 +0.4 2,815,056 - -1.5 2,815,082 - -0.1 2,815,165 - +0.1 2,815,165 - -0.3 2,815,212 + HP15_2665 0.16 -0.0 2,815,264 - HP15_2665 0.26 +0.0 2,815,418 + HP15_2665 0.56 -0.1 2,815,452 + HP15_2665 0.63 +0.1 2,815,452 + HP15_2665 0.63 +0.2 2,815,452 + HP15_2665 0.63 -0.0 2,815,460 - HP15_2665 0.65 -0.8 2,815,460 - HP15_2665 0.65 -0.1 2,815,460 - HP15_2665 0.65 +3.3 2,815,460 - HP15_2665 0.65 -0.3 2,815,486 - HP15_2665 0.70 +5.1 2,815,588 + HP15_2665 0.89 +0.8 2,815,745 + HP15_2666 0.33 +0.3 2,815,943 + +1.1 2,816,024 + +1.2
Or see this region's nucleotide sequence