Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2623 and HP15_2624 are separated by 90 nucleotides HP15_2624 and HP15_2625 are separated by 7 nucleotides HP15_2625 and HP15_2626 are separated by 15 nucleotides
HP15_2623: HP15_2623 - leucine dehydrogenase, at 2,774,069 to 2,775,184
_2623
HP15_2624: HP15_2624 - sodium-dependent transporter family protein, at 2,775,275 to 2,776,687
_2624
HP15_2625: HP15_2625 - silent information regulator protein Sir2, at 2,776,695 to 2,777,597
_2625
HP15_2626: HP15_2626 - conserved hypothetical protein, at 2,777,613 to 2,778,344
_2626
Position (kb)
2775
2776
2777 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2774.301 kb on + strand, within HP15_2623 at 2774.376 kb on - strand, within HP15_2623 at 2774.567 kb on - strand, within HP15_2623 at 2774.615 kb on + strand, within HP15_2623 at 2774.671 kb on + strand, within HP15_2623 at 2774.671 kb on + strand, within HP15_2623 at 2774.672 kb on - strand, within HP15_2623 at 2774.677 kb on - strand, within HP15_2623 at 2774.677 kb on - strand, within HP15_2623 at 2774.743 kb on + strand, within HP15_2623 at 2774.773 kb on - strand, within HP15_2623 at 2774.793 kb on - strand, within HP15_2623 at 2774.817 kb on + strand, within HP15_2623 at 2774.822 kb on + strand, within HP15_2623 at 2774.830 kb on - strand, within HP15_2623 at 2774.896 kb on + strand, within HP15_2623 at 2774.904 kb on - strand, within HP15_2623 at 2774.947 kb on - strand, within HP15_2623 at 2774.983 kb on - strand, within HP15_2623 at 2775.033 kb on - strand, within HP15_2623 at 2775.047 kb on - strand, within HP15_2623 at 2775.047 kb on - strand, within HP15_2623 at 2775.047 kb on - strand, within HP15_2623 at 2775.083 kb on - strand at 2775.152 kb on - strand at 2775.384 kb on + strand at 2775.386 kb on - strand at 2775.408 kb on - strand at 2775.541 kb on - strand, within HP15_2624 at 2775.666 kb on + strand, within HP15_2624 at 2775.693 kb on + strand, within HP15_2624 at 2775.785 kb on + strand, within HP15_2624 at 2775.872 kb on - strand, within HP15_2624 at 2775.930 kb on - strand, within HP15_2624 at 2775.995 kb on - strand, within HP15_2624 at 2776.021 kb on - strand, within HP15_2624 at 2776.103 kb on - strand, within HP15_2624 at 2776.126 kb on + strand, within HP15_2624 at 2776.167 kb on + strand, within HP15_2624 at 2776.175 kb on - strand, within HP15_2624 at 2776.268 kb on + strand, within HP15_2624 at 2776.326 kb on + strand, within HP15_2624 at 2776.326 kb on + strand, within HP15_2624 at 2776.326 kb on + strand, within HP15_2624 at 2776.326 kb on + strand, within HP15_2624 at 2776.351 kb on - strand, within HP15_2624 at 2776.351 kb on - strand, within HP15_2624 at 2776.391 kb on + strand, within HP15_2624 at 2776.391 kb on + strand, within HP15_2624 at 2776.519 kb on + strand, within HP15_2624 at 2776.591 kb on + strand at 2776.637 kb on - strand at 2776.664 kb on + strand at 2776.701 kb on - strand at 2776.907 kb on - strand, within HP15_2625 at 2777.073 kb on + strand, within HP15_2625 at 2777.073 kb on + strand, within HP15_2625 at 2777.073 kb on + strand, within HP15_2625 at 2777.081 kb on - strand, within HP15_2625 at 2777.139 kb on - strand, within HP15_2625 at 2777.171 kb on + strand, within HP15_2625 at 2777.227 kb on - strand, within HP15_2625 at 2777.241 kb on - strand, within HP15_2625 at 2777.273 kb on + strand, within HP15_2625 at 2777.297 kb on - strand, within HP15_2625 at 2777.359 kb on + strand, within HP15_2625 at 2777.431 kb on + strand, within HP15_2625 at 2777.438 kb on + strand, within HP15_2625 at 2777.439 kb on - strand, within HP15_2625 at 2777.446 kb on - strand, within HP15_2625
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,774,301 + HP15_2623 0.21 +0.3 2,774,376 - HP15_2623 0.28 -1.0 2,774,567 - HP15_2623 0.45 -0.5 2,774,615 + HP15_2623 0.49 -0.1 2,774,671 + HP15_2623 0.54 +0.3 2,774,671 + HP15_2623 0.54 -0.2 2,774,672 - HP15_2623 0.54 -0.5 2,774,677 - HP15_2623 0.54 -0.1 2,774,677 - HP15_2623 0.54 +0.1 2,774,743 + HP15_2623 0.60 -0.3 2,774,773 - HP15_2623 0.63 -1.7 2,774,793 - HP15_2623 0.65 -0.6 2,774,817 + HP15_2623 0.67 -2.2 2,774,822 + HP15_2623 0.67 +0.2 2,774,830 - HP15_2623 0.68 +3.5 2,774,896 + HP15_2623 0.74 +0.1 2,774,904 - HP15_2623 0.75 +0.6 2,774,947 - HP15_2623 0.79 +0.6 2,774,983 - HP15_2623 0.82 +0.7 2,775,033 - HP15_2623 0.86 -0.3 2,775,047 - HP15_2623 0.88 -1.2 2,775,047 - HP15_2623 0.88 -0.1 2,775,047 - HP15_2623 0.88 -0.8 2,775,083 - -2.2 2,775,152 - +0.3 2,775,384 + +0.1 2,775,386 - -1.5 2,775,408 - +0.6 2,775,541 - HP15_2624 0.19 +1.4 2,775,666 + HP15_2624 0.28 -0.8 2,775,693 + HP15_2624 0.30 +0.7 2,775,785 + HP15_2624 0.36 +1.1 2,775,872 - HP15_2624 0.42 -0.1 2,775,930 - HP15_2624 0.46 +0.0 2,775,995 - HP15_2624 0.51 +0.2 2,776,021 - HP15_2624 0.53 -1.8 2,776,103 - HP15_2624 0.59 -0.5 2,776,126 + HP15_2624 0.60 +0.0 2,776,167 + HP15_2624 0.63 +0.3 2,776,175 - HP15_2624 0.64 -0.1 2,776,268 + HP15_2624 0.70 +0.0 2,776,326 + HP15_2624 0.74 -0.7 2,776,326 + HP15_2624 0.74 -0.5 2,776,326 + HP15_2624 0.74 +0.1 2,776,326 + HP15_2624 0.74 -0.4 2,776,351 - HP15_2624 0.76 +0.3 2,776,351 - HP15_2624 0.76 -0.8 2,776,391 + HP15_2624 0.79 +0.3 2,776,391 + HP15_2624 0.79 -0.5 2,776,519 + HP15_2624 0.88 -0.9 2,776,591 + +0.9 2,776,637 - +0.3 2,776,664 + +1.1 2,776,701 - +0.1 2,776,907 - HP15_2625 0.23 -0.0 2,777,073 + HP15_2625 0.42 -0.1 2,777,073 + HP15_2625 0.42 -0.2 2,777,073 + HP15_2625 0.42 -0.2 2,777,081 - HP15_2625 0.43 +0.3 2,777,139 - HP15_2625 0.49 +0.4 2,777,171 + HP15_2625 0.53 +0.2 2,777,227 - HP15_2625 0.59 -0.2 2,777,241 - HP15_2625 0.60 -0.3 2,777,273 + HP15_2625 0.64 -0.8 2,777,297 - HP15_2625 0.67 +0.7 2,777,359 + HP15_2625 0.74 -0.3 2,777,431 + HP15_2625 0.82 +3.6 2,777,438 + HP15_2625 0.82 -1.4 2,777,439 - HP15_2625 0.82 -1.3 2,777,446 - HP15_2625 0.83 +0.4
Or see this region's nucleotide sequence