Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1996 and HP15_1997 overlap by 4 nucleotides HP15_1997 and HP15_1998 overlap by 1 nucleotides HP15_1998 and HP15_1999 overlap by 4 nucleotides
HP15_1996: HP15_1996 - phage Gp37Gp68, at 2,102,446 to 2,103,525
_1996
HP15_1997: HP15_1997 - hypothetical protein, at 2,103,522 to 2,104,019
_1997
HP15_1998: HP15_1998 - conserved hypothetical protein, at 2,104,019 to 2,104,771
_1998
HP15_1999: HP15_1999 - hypothetical protein, at 2,104,768 to 2,105,268
_1999
Position (kb)
2103
2104
2105 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2102.884 kb on - strand, within HP15_1996 at 2103.005 kb on - strand, within HP15_1996 at 2103.008 kb on + strand, within HP15_1996 at 2103.022 kb on - strand, within HP15_1996 at 2103.024 kb on - strand, within HP15_1996 at 2103.150 kb on - strand, within HP15_1996 at 2103.244 kb on - strand, within HP15_1996 at 2103.500 kb on - strand at 2103.621 kb on - strand, within HP15_1997 at 2103.832 kb on + strand, within HP15_1997 at 2103.840 kb on - strand, within HP15_1997 at 2103.956 kb on - strand, within HP15_1997 at 2103.977 kb on + strand at 2104.024 kb on - strand at 2104.114 kb on - strand, within HP15_1998 at 2104.117 kb on + strand, within HP15_1998 at 2104.122 kb on + strand, within HP15_1998 at 2104.137 kb on + strand, within HP15_1998 at 2104.145 kb on - strand, within HP15_1998 at 2104.175 kb on - strand, within HP15_1998 at 2104.205 kb on - strand, within HP15_1998 at 2104.245 kb on - strand, within HP15_1998 at 2104.392 kb on + strand, within HP15_1998 at 2104.578 kb on - strand, within HP15_1998 at 2104.609 kb on + strand, within HP15_1998 at 2104.619 kb on - strand, within HP15_1998 at 2104.651 kb on - strand, within HP15_1998 at 2104.854 kb on - strand, within HP15_1999 at 2104.924 kb on - strand, within HP15_1999 at 2104.975 kb on - strand, within HP15_1999
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,102,884 - HP15_1996 0.41 -0.1 2,103,005 - HP15_1996 0.52 -0.6 2,103,008 + HP15_1996 0.52 +0.4 2,103,022 - HP15_1996 0.53 +0.4 2,103,024 - HP15_1996 0.54 +1.0 2,103,150 - HP15_1996 0.65 +1.1 2,103,244 - HP15_1996 0.74 -1.6 2,103,500 - +0.8 2,103,621 - HP15_1997 0.20 -0.0 2,103,832 + HP15_1997 0.62 +3.8 2,103,840 - HP15_1997 0.64 -1.1 2,103,956 - HP15_1997 0.87 +0.6 2,103,977 + +1.0 2,104,024 - +0.5 2,104,114 - HP15_1998 0.13 +0.0 2,104,117 + HP15_1998 0.13 -0.2 2,104,122 + HP15_1998 0.14 -0.3 2,104,137 + HP15_1998 0.16 -0.6 2,104,145 - HP15_1998 0.17 +3.3 2,104,175 - HP15_1998 0.21 -1.6 2,104,205 - HP15_1998 0.25 -1.4 2,104,245 - HP15_1998 0.30 -0.3 2,104,392 + HP15_1998 0.50 -1.0 2,104,578 - HP15_1998 0.74 +0.3 2,104,609 + HP15_1998 0.78 +1.8 2,104,619 - HP15_1998 0.80 +0.2 2,104,651 - HP15_1998 0.84 -0.5 2,104,854 - HP15_1999 0.17 +0.1 2,104,924 - HP15_1999 0.31 -0.8 2,104,975 - HP15_1999 0.41 -0.2
Or see this region's nucleotide sequence