Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1410 and HP15_1411 are separated by 88 nucleotides HP15_1411 and HP15_1412 are separated by 13 nucleotides
HP15_1410: HP15_1410 - iron(III) compound receptor, at 1,489,076 to 1,491,175
_1410
HP15_1411: HP15_1411 - hypothetical 3-methyladenine DNA glycosylase, at 1,491,264 to 1,491,929
_1411
HP15_1412: HP15_1412 - conserved hypothetical protein, membrane, at 1,491,943 to 1,493,067
_1412
Position (kb)
1491
1492 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1490.269 kb on + strand, within HP15_1410 at 1490.269 kb on + strand, within HP15_1410 at 1490.274 kb on + strand, within HP15_1410 at 1490.277 kb on - strand, within HP15_1410 at 1490.356 kb on + strand, within HP15_1410 at 1490.372 kb on - strand, within HP15_1410 at 1490.393 kb on + strand, within HP15_1410 at 1490.403 kb on - strand, within HP15_1410 at 1490.501 kb on + strand, within HP15_1410 at 1490.602 kb on + strand, within HP15_1410 at 1490.618 kb on - strand, within HP15_1410 at 1490.622 kb on + strand, within HP15_1410 at 1490.622 kb on + strand, within HP15_1410 at 1490.681 kb on + strand, within HP15_1410 at 1490.719 kb on - strand, within HP15_1410 at 1490.766 kb on + strand, within HP15_1410 at 1490.878 kb on + strand, within HP15_1410 at 1490.878 kb on + strand, within HP15_1410 at 1490.880 kb on - strand, within HP15_1410 at 1490.886 kb on + strand, within HP15_1410 at 1490.886 kb on + strand, within HP15_1410 at 1490.886 kb on - strand, within HP15_1410 at 1490.894 kb on - strand, within HP15_1410 at 1490.894 kb on - strand, within HP15_1410 at 1490.958 kb on + strand, within HP15_1410 at 1490.963 kb on + strand, within HP15_1410 at 1491.136 kb on + strand at 1491.144 kb on - strand at 1491.149 kb on + strand at 1491.397 kb on + strand, within HP15_1411 at 1491.400 kb on - strand, within HP15_1411 at 1491.400 kb on - strand, within HP15_1411 at 1491.405 kb on - strand, within HP15_1411 at 1491.431 kb on + strand, within HP15_1411 at 1491.431 kb on + strand, within HP15_1411 at 1491.508 kb on + strand, within HP15_1411 at 1491.530 kb on + strand, within HP15_1411 at 1491.535 kb on + strand, within HP15_1411 at 1491.715 kb on - strand, within HP15_1411 at 1491.777 kb on - strand, within HP15_1411 at 1491.932 kb on - strand at 1492.157 kb on + strand, within HP15_1412 at 1492.165 kb on - strand, within HP15_1412 at 1492.184 kb on - strand, within HP15_1412 at 1492.249 kb on + strand, within HP15_1412 at 1492.268 kb on + strand, within HP15_1412 at 1492.274 kb on - strand, within HP15_1412 at 1492.325 kb on + strand, within HP15_1412 at 1492.671 kb on - strand, within HP15_1412 at 1492.707 kb on + strand, within HP15_1412 at 1492.721 kb on + strand, within HP15_1412 at 1492.763 kb on + strand, within HP15_1412 at 1492.894 kb on - strand, within HP15_1412
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,490,269 + HP15_1410 0.57 -0.0 1,490,269 + HP15_1410 0.57 -0.4 1,490,274 + HP15_1410 0.57 -1.5 1,490,277 - HP15_1410 0.57 +0.6 1,490,356 + HP15_1410 0.61 -1.5 1,490,372 - HP15_1410 0.62 +0.2 1,490,393 + HP15_1410 0.63 +0.1 1,490,403 - HP15_1410 0.63 +1.7 1,490,501 + HP15_1410 0.68 +0.2 1,490,602 + HP15_1410 0.73 +0.7 1,490,618 - HP15_1410 0.73 +0.0 1,490,622 + HP15_1410 0.74 -0.1 1,490,622 + HP15_1410 0.74 -1.7 1,490,681 + HP15_1410 0.76 -0.7 1,490,719 - HP15_1410 0.78 -0.2 1,490,766 + HP15_1410 0.80 -0.3 1,490,878 + HP15_1410 0.86 -0.1 1,490,878 + HP15_1410 0.86 -0.6 1,490,880 - HP15_1410 0.86 +0.1 1,490,886 + HP15_1410 0.86 +0.5 1,490,886 + HP15_1410 0.86 -1.9 1,490,886 - HP15_1410 0.86 -4.2 1,490,894 - HP15_1410 0.87 -0.3 1,490,894 - HP15_1410 0.87 -0.7 1,490,958 + HP15_1410 0.90 +1.0 1,490,963 + HP15_1410 0.90 -1.2 1,491,136 + -0.3 1,491,144 - -1.1 1,491,149 + -0.1 1,491,397 + HP15_1411 0.20 -1.4 1,491,400 - HP15_1411 0.20 -0.6 1,491,400 - HP15_1411 0.20 -0.5 1,491,405 - HP15_1411 0.21 -0.7 1,491,431 + HP15_1411 0.25 -0.3 1,491,431 + HP15_1411 0.25 +0.3 1,491,508 + HP15_1411 0.37 -0.6 1,491,530 + HP15_1411 0.40 -0.4 1,491,535 + HP15_1411 0.41 +1.7 1,491,715 - HP15_1411 0.68 +1.7 1,491,777 - HP15_1411 0.77 -0.3 1,491,932 - -1.7 1,492,157 + HP15_1412 0.19 -1.2 1,492,165 - HP15_1412 0.20 +1.1 1,492,184 - HP15_1412 0.21 +1.2 1,492,249 + HP15_1412 0.27 -1.8 1,492,268 + HP15_1412 0.29 -0.7 1,492,274 - HP15_1412 0.29 +0.6 1,492,325 + HP15_1412 0.34 -0.0 1,492,671 - HP15_1412 0.65 -1.2 1,492,707 + HP15_1412 0.68 +0.1 1,492,721 + HP15_1412 0.69 +0.1 1,492,763 + HP15_1412 0.73 -0.3 1,492,894 - HP15_1412 0.85 +1.2
Or see this region's nucleotide sequence