Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3208 and Dsui_3209 are separated by 68 nucleotides Dsui_3209 and Dsui_3210 are separated by 10 nucleotides Dsui_3210 and Dsui_3211 are separated by 241 nucleotides
Dsui_3208: Dsui_3208 - cysteine synthase A, at 3,443,001 to 3,443,933
_3208
Dsui_3209: Dsui_3209 - putative esterase of the alpha/beta hydrolase fold protein, at 3,444,002 to 3,444,538
_3209
Dsui_3210: Dsui_3210 - hypothetical protein, at 3,444,549 to 3,445,031
_3210
Dsui_3211: Dsui_3211 - glutamate dehydrogenase/leucine dehydrogenase, at 3,445,273 to 3,446,619
_3211
Position (kb)
3444
3445
3446 Strain fitness (log2 ratio)
-2
-1
0
1 at 3443.658 kb on + strand, within Dsui_3208 at 3443.678 kb on - strand, within Dsui_3208 at 3443.791 kb on - strand at 3443.810 kb on + strand, within Dsui_3208 at 3443.869 kb on - strand at 3443.908 kb on - strand at 3443.951 kb on - strand at 3444.101 kb on - strand at 3444.138 kb on - strand, within Dsui_3209 at 3444.138 kb on - strand, within Dsui_3209 at 3444.148 kb on - strand, within Dsui_3209 at 3444.161 kb on - strand at 3444.291 kb on - strand, within Dsui_3209 at 3444.304 kb on - strand, within Dsui_3209 at 3444.347 kb on + strand, within Dsui_3209 at 3444.365 kb on - strand at 3444.433 kb on + strand, within Dsui_3209 at 3444.469 kb on + strand, within Dsui_3209 at 3444.477 kb on - strand at 3444.525 kb on + strand at 3444.654 kb on - strand, within Dsui_3210 at 3444.717 kb on + strand, within Dsui_3210 at 3444.773 kb on - strand, within Dsui_3210 at 3444.836 kb on + strand, within Dsui_3210 at 3444.894 kb on + strand, within Dsui_3210 at 3444.987 kb on - strand at 3445.009 kb on + strand at 3445.029 kb on + strand at 3445.057 kb on + strand at 3445.124 kb on - strand at 3445.159 kb on - strand at 3445.185 kb on + strand at 3445.211 kb on - strand at 3445.319 kb on - strand at 3445.360 kb on - strand at 3445.466 kb on + strand, within Dsui_3211 at 3445.474 kb on - strand, within Dsui_3211 at 3445.485 kb on + strand, within Dsui_3211 at 3445.493 kb on - strand, within Dsui_3211 at 3445.493 kb on - strand, within Dsui_3211 at 3445.536 kb on + strand, within Dsui_3211 at 3445.632 kb on + strand, within Dsui_3211 at 3445.674 kb on + strand, within Dsui_3211 at 3445.674 kb on + strand, within Dsui_3211 at 3445.682 kb on - strand, within Dsui_3211 at 3445.797 kb on - strand at 3445.889 kb on - strand at 3445.983 kb on - strand, within Dsui_3211
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 3,443,658 + Dsui_3208 0.70 +0.1 3,443,678 - Dsui_3208 0.73 -1.7 3,443,791 - -0.9 3,443,810 + Dsui_3208 0.87 -0.1 3,443,869 - +0.7 3,443,908 - -0.3 3,443,951 - -0.9 3,444,101 - +0.7 3,444,138 - Dsui_3209 0.25 +0.7 3,444,138 - Dsui_3209 0.25 -1.9 3,444,148 - Dsui_3209 0.27 -1.3 3,444,161 - +0.7 3,444,291 - Dsui_3209 0.54 -0.3 3,444,304 - Dsui_3209 0.56 -0.3 3,444,347 + Dsui_3209 0.64 -0.3 3,444,365 - -0.3 3,444,433 + Dsui_3209 0.80 -0.6 3,444,469 + Dsui_3209 0.87 -0.1 3,444,477 - +0.7 3,444,525 + +0.2 3,444,654 - Dsui_3210 0.22 -0.3 3,444,717 + Dsui_3210 0.35 -0.9 3,444,773 - Dsui_3210 0.46 -1.3 3,444,836 + Dsui_3210 0.59 -0.3 3,444,894 + Dsui_3210 0.71 +0.7 3,444,987 - -0.3 3,445,009 + +1.7 3,445,029 + +0.7 3,445,057 + -0.3 3,445,124 - -0.3 3,445,159 - -0.9 3,445,185 + -1.3 3,445,211 - -0.9 3,445,319 - +0.7 3,445,360 - -0.9 3,445,466 + Dsui_3211 0.14 +0.1 3,445,474 - Dsui_3211 0.15 -0.9 3,445,485 + Dsui_3211 0.16 -0.0 3,445,493 - Dsui_3211 0.16 -1.3 3,445,493 - Dsui_3211 0.16 -2.1 3,445,536 + Dsui_3211 0.20 -0.1 3,445,632 + Dsui_3211 0.27 -0.0 3,445,674 + Dsui_3211 0.30 -0.3 3,445,674 + Dsui_3211 0.30 -0.3 3,445,682 - Dsui_3211 0.30 -1.3 3,445,797 - -0.9 3,445,889 - +0.7 3,445,983 - Dsui_3211 0.53 -0.3
Or see this region's nucleotide sequence