Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2874 and Dsui_2875 are separated by 150 nucleotides Dsui_2875 and Dsui_2876 are separated by 2 nucleotides
Dsui_2874: Dsui_2874 - putative periplasmic/secreted protein, at 3,068,162 to 3,068,845
_2874
Dsui_2875: Dsui_2875 - outer membrane protein, at 3,068,996 to 3,070,471
_2875
Dsui_2876: Dsui_2876 - RND family efflux transporter, MFP subunit, at 3,070,474 to 3,071,730
_2876
Position (kb)
3068
3069
3070
3071 Strain fitness (log2 ratio)
-2
-1
0
1 at 3068.119 kb on + strand at 3068.194 kb on - strand at 3068.244 kb on + strand, within Dsui_2874 at 3068.382 kb on + strand, within Dsui_2874 at 3068.423 kb on + strand, within Dsui_2874 at 3068.423 kb on + strand, within Dsui_2874 at 3068.438 kb on + strand, within Dsui_2874 at 3068.547 kb on + strand, within Dsui_2874 at 3068.933 kb on - strand at 3068.971 kb on - strand at 3069.041 kb on - strand at 3069.278 kb on + strand, within Dsui_2875 at 3069.377 kb on + strand, within Dsui_2875 at 3069.482 kb on + strand, within Dsui_2875 at 3069.482 kb on + strand at 3069.487 kb on + strand, within Dsui_2875 at 3069.500 kb on - strand at 3069.500 kb on - strand at 3069.552 kb on + strand, within Dsui_2875 at 3069.621 kb on + strand, within Dsui_2875 at 3069.902 kb on + strand, within Dsui_2875 at 3070.056 kb on + strand, within Dsui_2875 at 3070.056 kb on + strand, within Dsui_2875 at 3070.356 kb on + strand at 3070.363 kb on - strand at 3070.375 kb on - strand at 3070.375 kb on - strand at 3070.488 kb on + strand at 3070.617 kb on + strand, within Dsui_2876 at 3070.680 kb on + strand, within Dsui_2876 at 3070.689 kb on - strand, within Dsui_2876 at 3070.772 kb on - strand at 3070.780 kb on + strand, within Dsui_2876 at 3070.780 kb on + strand, within Dsui_2876 at 3070.783 kb on + strand, within Dsui_2876 at 3070.820 kb on + strand, within Dsui_2876 at 3070.820 kb on + strand, within Dsui_2876 at 3070.851 kb on + strand, within Dsui_2876 at 3070.979 kb on - strand at 3071.069 kb on + strand, within Dsui_2876 at 3071.069 kb on + strand, within Dsui_2876 at 3071.120 kb on - strand, within Dsui_2876 at 3071.304 kb on + strand, within Dsui_2876 at 3071.385 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 3,068,119 + -0.4 3,068,194 - -2.6 3,068,244 + Dsui_2874 0.12 +0.4 3,068,382 + Dsui_2874 0.32 -1.1 3,068,423 + Dsui_2874 0.38 -0.7 3,068,423 + Dsui_2874 0.38 +0.5 3,068,438 + Dsui_2874 0.40 -0.5 3,068,547 + Dsui_2874 0.56 +1.5 3,068,933 - +0.9 3,068,971 - -0.1 3,069,041 - -0.1 3,069,278 + Dsui_2875 0.19 -0.6 3,069,377 + Dsui_2875 0.26 -1.2 3,069,482 + Dsui_2875 0.33 -0.8 3,069,482 + +0.9 3,069,487 + Dsui_2875 0.33 +0.2 3,069,500 - +0.9 3,069,500 - +0.9 3,069,552 + Dsui_2875 0.38 -1.4 3,069,621 + Dsui_2875 0.42 -0.1 3,069,902 + Dsui_2875 0.61 -0.5 3,070,056 + Dsui_2875 0.72 -1.1 3,070,056 + Dsui_2875 0.72 +1.5 3,070,356 + -0.5 3,070,363 - -0.1 3,070,375 - -0.1 3,070,375 - -0.1 3,070,488 + +0.9 3,070,617 + Dsui_2876 0.11 -0.1 3,070,680 + Dsui_2876 0.16 -0.4 3,070,689 - Dsui_2876 0.17 -0.1 3,070,772 - -0.1 3,070,780 + Dsui_2876 0.24 -0.4 3,070,780 + Dsui_2876 0.24 -0.3 3,070,783 + Dsui_2876 0.25 +0.5 3,070,820 + Dsui_2876 0.28 -0.0 3,070,820 + Dsui_2876 0.28 -0.4 3,070,851 + Dsui_2876 0.30 -0.5 3,070,979 - -1.1 3,071,069 + Dsui_2876 0.47 -0.7 3,071,069 + Dsui_2876 0.47 -1.7 3,071,120 - Dsui_2876 0.51 -0.7 3,071,304 + Dsui_2876 0.66 -0.7 3,071,385 - -1.1
Or see this region's nucleotide sequence