Strain Fitness in Dechlorosoma suillum PS around Dsui_2298

Experiment: D-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2297 and Dsui_2298 are separated by 65 nucleotidesDsui_2298 and Dsui_2299 are separated by 114 nucleotides Dsui_2297: Dsui_2297 - acetoacetyl-CoA synthase, at 2,450,906 to 2,452,876 _2297 Dsui_2298: Dsui_2298 - putative thioesterase, at 2,452,942 to 2,453,352 _2298 Dsui_2299: Dsui_2299 - flavin-dependent dehydrogenase, at 2,453,467 to 2,455,113 _2299 Position (kb) 2452 2453 2454Strain fitness (log2 ratio) -2 -1 0 1at 2452.082 kb on + strandat 2452.196 kb on - strand, within Dsui_2297at 2452.267 kb on - strand, within Dsui_2297at 2452.274 kb on - strand, within Dsui_2297at 2452.518 kb on + strandat 2452.687 kb on - strandat 2452.721 kb on - strandat 2452.905 kb on + strandat 2452.918 kb on - strandat 2452.929 kb on - strandat 2452.947 kb on - strandat 2453.167 kb on - strand, within Dsui_2298at 2453.199 kb on + strand, within Dsui_2298at 2453.207 kb on + strandat 2453.212 kb on + strand, within Dsui_2298at 2453.215 kb on - strand, within Dsui_2298at 2453.244 kb on + strand, within Dsui_2298at 2453.265 kb on - strand, within Dsui_2298at 2453.272 kb on + strand, within Dsui_2298at 2453.275 kb on - strand, within Dsui_2298at 2453.368 kb on + strandat 2453.368 kb on + strandat 2453.368 kb on + strandat 2453.376 kb on - strandat 2453.376 kb on - strandat 2453.645 kb on - strandat 2453.650 kb on + strand, within Dsui_2299at 2453.653 kb on - strand, within Dsui_2299at 2453.828 kb on - strandat 2454.004 kb on + strand, within Dsui_2299at 2454.013 kb on - strandat 2454.037 kb on + strand, within Dsui_2299at 2454.090 kb on + strand, within Dsui_2299at 2454.093 kb on + strand, within Dsui_2299at 2454.093 kb on + strand, within Dsui_2299at 2454.162 kb on + strand, within Dsui_2299at 2454.167 kb on + strand, within Dsui_2299at 2454.205 kb on + strand, within Dsui_2299at 2454.223 kb on - strand, within Dsui_2299

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Lactate (C)
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2,452,082 + +0.8
2,452,196 - Dsui_2297 0.65 -1.5
2,452,267 - Dsui_2297 0.69 +0.8
2,452,274 - Dsui_2297 0.69 +0.8
2,452,518 + +0.8
2,452,687 - +0.8
2,452,721 - -1.8
2,452,905 + +0.8
2,452,918 - -0.2
2,452,929 - -0.2
2,452,947 - -0.2
2,453,167 - Dsui_2298 0.55 +0.8
2,453,199 + Dsui_2298 0.63 -0.2
2,453,207 + -0.2
2,453,212 + Dsui_2298 0.66 -0.2
2,453,215 - Dsui_2298 0.66 +0.8
2,453,244 + Dsui_2298 0.73 +0.8
2,453,265 - Dsui_2298 0.79 -0.8
2,453,272 + Dsui_2298 0.80 +0.8
2,453,275 - Dsui_2298 0.81 -1.2
2,453,368 + +0.8
2,453,368 + +0.8
2,453,368 + +0.8
2,453,376 - +0.8
2,453,376 - -1.5
2,453,645 - -1.2
2,453,650 + Dsui_2299 0.11 -0.6
2,453,653 - Dsui_2299 0.11 -0.2
2,453,828 - +0.8
2,454,004 + Dsui_2299 0.33 -0.4
2,454,013 - +0.8
2,454,037 + Dsui_2299 0.35 -0.1
2,454,090 + Dsui_2299 0.38 -2.0
2,454,093 + Dsui_2299 0.38 +0.2
2,454,093 + Dsui_2299 0.38 +0.4
2,454,162 + Dsui_2299 0.42 -0.5
2,454,167 + Dsui_2299 0.43 -1.8
2,454,205 + Dsui_2299 0.45 -0.9
2,454,223 - Dsui_2299 0.46 -0.2

Or see this region's nucleotide sequence