Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2297 and Dsui_2298 are separated by 65 nucleotides Dsui_2298 and Dsui_2299 are separated by 114 nucleotides
Dsui_2297: Dsui_2297 - acetoacetyl-CoA synthase, at 2,450,906 to 2,452,876
_2297
Dsui_2298: Dsui_2298 - putative thioesterase, at 2,452,942 to 2,453,352
_2298
Dsui_2299: Dsui_2299 - flavin-dependent dehydrogenase, at 2,453,467 to 2,455,113
_2299
Position (kb)
2452
2453
2454 Strain fitness (log2 ratio)
-2
-1
0
1 at 2452.082 kb on + strand at 2452.196 kb on - strand, within Dsui_2297 at 2452.267 kb on - strand, within Dsui_2297 at 2452.274 kb on - strand, within Dsui_2297 at 2452.518 kb on + strand at 2452.687 kb on - strand at 2452.721 kb on - strand at 2452.905 kb on + strand at 2452.918 kb on - strand at 2452.929 kb on - strand at 2452.947 kb on - strand at 2453.167 kb on - strand, within Dsui_2298 at 2453.199 kb on + strand, within Dsui_2298 at 2453.207 kb on + strand at 2453.212 kb on + strand, within Dsui_2298 at 2453.215 kb on - strand, within Dsui_2298 at 2453.244 kb on + strand, within Dsui_2298 at 2453.265 kb on - strand, within Dsui_2298 at 2453.272 kb on + strand, within Dsui_2298 at 2453.275 kb on - strand, within Dsui_2298 at 2453.368 kb on + strand at 2453.368 kb on + strand at 2453.368 kb on + strand at 2453.376 kb on - strand at 2453.376 kb on - strand at 2453.645 kb on - strand at 2453.650 kb on + strand, within Dsui_2299 at 2453.653 kb on - strand, within Dsui_2299 at 2453.828 kb on - strand at 2454.004 kb on + strand, within Dsui_2299 at 2454.013 kb on - strand at 2454.037 kb on + strand, within Dsui_2299 at 2454.090 kb on + strand, within Dsui_2299 at 2454.093 kb on + strand, within Dsui_2299 at 2454.093 kb on + strand, within Dsui_2299 at 2454.162 kb on + strand, within Dsui_2299 at 2454.167 kb on + strand, within Dsui_2299 at 2454.205 kb on + strand, within Dsui_2299 at 2454.223 kb on - strand, within Dsui_2299
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 2,452,082 + +0.8 2,452,196 - Dsui_2297 0.65 -1.5 2,452,267 - Dsui_2297 0.69 +0.8 2,452,274 - Dsui_2297 0.69 +0.8 2,452,518 + +0.8 2,452,687 - +0.8 2,452,721 - -1.8 2,452,905 + +0.8 2,452,918 - -0.2 2,452,929 - -0.2 2,452,947 - -0.2 2,453,167 - Dsui_2298 0.55 +0.8 2,453,199 + Dsui_2298 0.63 -0.2 2,453,207 + -0.2 2,453,212 + Dsui_2298 0.66 -0.2 2,453,215 - Dsui_2298 0.66 +0.8 2,453,244 + Dsui_2298 0.73 +0.8 2,453,265 - Dsui_2298 0.79 -0.8 2,453,272 + Dsui_2298 0.80 +0.8 2,453,275 - Dsui_2298 0.81 -1.2 2,453,368 + +0.8 2,453,368 + +0.8 2,453,368 + +0.8 2,453,376 - +0.8 2,453,376 - -1.5 2,453,645 - -1.2 2,453,650 + Dsui_2299 0.11 -0.6 2,453,653 - Dsui_2299 0.11 -0.2 2,453,828 - +0.8 2,454,004 + Dsui_2299 0.33 -0.4 2,454,013 - +0.8 2,454,037 + Dsui_2299 0.35 -0.1 2,454,090 + Dsui_2299 0.38 -2.0 2,454,093 + Dsui_2299 0.38 +0.2 2,454,093 + Dsui_2299 0.38 +0.4 2,454,162 + Dsui_2299 0.42 -0.5 2,454,167 + Dsui_2299 0.43 -1.8 2,454,205 + Dsui_2299 0.45 -0.9 2,454,223 - Dsui_2299 0.46 -0.2
Or see this region's nucleotide sequence