Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0222 and Dsui_0223 are separated by 7 nucleotides Dsui_0223 and Dsui_0224 are separated by 9 nucleotides Dsui_0224 and Dsui_0225 are separated by 280 nucleotides Dsui_0225 and Dsui_0226 are separated by 144 nucleotides
Dsui_0222: Dsui_0222 - uncharacterized protein affecting Mg2+/Co2+ transport, at 220,676 to 221,059
_0222
Dsui_0223: Dsui_0223 - methylase involved in ubiquinone/menaquinone biosynthesis, at 221,067 to 221,660
_0223
Dsui_0224: Dsui_0224 - transcriptional regulator, at 221,670 to 222,575
_0224
Dsui_0225: Dsui_0225 - hypothetical protein, at 222,856 to 222,999
_0225
Dsui_0226: Dsui_0226 - glutamate N-acetyltransferase/amino-acid acetyltransferase, at 223,144 to 224,385
_0226
Position (kb) 221
222
223 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 220.731 kb on - strand, within Dsui_0222 at 220.782 kb on - strand, within Dsui_0222 at 220.865 kb on + strand, within Dsui_0222 at 220.977 kb on + strand, within Dsui_0222 at 221.013 kb on - strand, within Dsui_0222 at 221.083 kb on + strand at 221.091 kb on - strand at 221.096 kb on - strand at 221.165 kb on + strand, within Dsui_0223 at 221.368 kb on + strand, within Dsui_0223 at 221.384 kb on + strand, within Dsui_0223 at 221.411 kb on + strand, within Dsui_0223 at 221.431 kb on + strand, within Dsui_0223 at 221.499 kb on + strand, within Dsui_0223 at 221.520 kb on + strand, within Dsui_0223 at 221.589 kb on - strand, within Dsui_0223 at 221.732 kb on - strand at 221.804 kb on + strand, within Dsui_0224 at 221.863 kb on - strand, within Dsui_0224 at 221.990 kb on - strand, within Dsui_0224 at 222.005 kb on - strand, within Dsui_0224 at 222.060 kb on + strand, within Dsui_0224 at 222.067 kb on - strand, within Dsui_0224 at 222.182 kb on + strand, within Dsui_0224 at 222.190 kb on - strand, within Dsui_0224 at 222.221 kb on - strand, within Dsui_0224 at 222.256 kb on + strand, within Dsui_0224 at 222.301 kb on - strand at 222.411 kb on + strand, within Dsui_0224 at 222.426 kb on - strand, within Dsui_0224 at 222.437 kb on + strand, within Dsui_0224 at 222.504 kb on + strand at 222.570 kb on + strand at 222.626 kb on - strand at 222.626 kb on - strand at 222.720 kb on + strand at 222.726 kb on + strand at 222.728 kb on - strand at 222.772 kb on - strand at 222.778 kb on + strand at 222.778 kb on + strand at 222.786 kb on - strand at 222.793 kb on + strand at 222.929 kb on + strand, within Dsui_0225 at 222.932 kb on + strand, within Dsui_0225 at 222.948 kb on - strand, within Dsui_0225 at 222.954 kb on + strand, within Dsui_0225 at 222.954 kb on + strand, within Dsui_0225 at 222.954 kb on + strand, within Dsui_0225 at 222.962 kb on - strand, within Dsui_0225 at 222.962 kb on - strand, within Dsui_0225 at 222.996 kb on - strand at 223.006 kb on - strand at 223.019 kb on - strand at 223.068 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 220,731 - Dsui_0222 0.14 +0.7 220,782 - Dsui_0222 0.28 -1.3 220,865 + Dsui_0222 0.49 -0.4 220,977 + Dsui_0222 0.78 -0.0 221,013 - Dsui_0222 0.88 -2.5 221,083 + -0.1 221,091 - +0.7 221,096 - -1.3 221,165 + Dsui_0223 0.16 +0.2 221,368 + Dsui_0223 0.51 -0.1 221,384 + Dsui_0223 0.53 +0.1 221,411 + Dsui_0223 0.58 -0.3 221,431 + Dsui_0223 0.61 -0.1 221,499 + Dsui_0223 0.73 -1.7 221,520 + Dsui_0223 0.76 -0.8 221,589 - Dsui_0223 0.88 -0.8 221,732 - -2.8 221,804 + Dsui_0224 0.15 -0.6 221,863 - Dsui_0224 0.21 +0.7 221,990 - Dsui_0224 0.35 -0.9 222,005 - Dsui_0224 0.37 -1.9 222,060 + Dsui_0224 0.43 +0.2 222,067 - Dsui_0224 0.44 +0.7 222,182 + Dsui_0224 0.57 -2.1 222,190 - Dsui_0224 0.57 -1.3 222,221 - Dsui_0224 0.61 -0.9 222,256 + Dsui_0224 0.65 -0.9 222,301 - +0.7 222,411 + Dsui_0224 0.82 -1.7 222,426 - Dsui_0224 0.83 +0.7 222,437 + Dsui_0224 0.85 -0.9 222,504 + -0.3 222,570 + -0.9 222,626 - -0.9 222,626 - -0.2 222,720 + -0.3 222,726 + -0.9 222,728 - -1.9 222,772 - -2.3 222,778 + +0.7 222,778 + -0.3 222,786 - -0.3 222,793 + -1.9 222,929 + Dsui_0225 0.51 -0.3 222,932 + Dsui_0225 0.53 -0.9 222,948 - Dsui_0225 0.64 -0.3 222,954 + Dsui_0225 0.68 -2.5 222,954 + Dsui_0225 0.68 -2.5 222,954 + Dsui_0225 0.68 -1.3 222,962 - Dsui_0225 0.74 -0.3 222,962 - Dsui_0225 0.74 +0.7 222,996 - +0.7 223,006 - +0.7 223,019 - +0.7 223,068 + -0.9
Or see this region's nucleotide sequence