Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03795

Experiment: PYE 30C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep3 12 days
3,957,803	+				+0.3
3,957,824	+				-0.1
3,957,847	-				-0.4
3,957,894	-				-0.3
3,957,933	+				+0.0
3,957,942	-				-0.5
3,957,948	+				+3.3
3,957,976	-				-1.2
3,957,988	+		CCNA_03794	0.10	-0.7
3,957,996	-		CCNA_03794	0.11	+0.1
3,957,996	-		CCNA_03794	0.11	+1.3
3,958,006	-		CCNA_03794	0.13	+1.3
3,958,077	+		CCNA_03794	0.24	+0.0
3,958,114	+		CCNA_03794	0.29	-1.3
3,958,114	+		CCNA_03794	0.29	+1.8
3,958,120	-				+0.5
3,958,122	-		CCNA_03794	0.31	+2.3
3,958,127	-		CCNA_03794	0.31	-0.8
3,958,139	+		CCNA_03794	0.33	+0.6
3,958,139	+		CCNA_03794	0.33	-1.5
3,958,139	+		CCNA_03794	0.33	-1.0
3,958,141	-		CCNA_03794	0.33	-1.2
3,958,147	-		CCNA_03794	0.34	+0.8
3,958,147	-		CCNA_03794	0.34	-1.2
3,958,147	-		CCNA_03794	0.34	-1.2
3,958,182	-		CCNA_03794	0.40	-1.7
3,958,198	+		CCNA_03794	0.42	-0.4
3,958,210	+		CCNA_03794	0.44	-1.1
3,958,210	+		CCNA_03794	0.44	-1.5
3,958,210	+		CCNA_03794	0.44	-1.0
3,958,210	+		CCNA_03794	0.44	-1.0
3,958,210	+		CCNA_03794	0.44	-1.3
3,958,210	+		CCNA_03794	0.44	-1.5
3,958,223	-		CCNA_03794	0.46	+2.3
3,958,280	-		CCNA_03794	0.55	+0.5
3,958,286	-		CCNA_03794	0.56	+0.8
3,958,286	-		CCNA_03794	0.56	+0.0
3,958,288	+		CCNA_03794	0.56	-1.6
3,958,291	-		CCNA_03794	0.57	+0.0
3,958,296	-		CCNA_03794	0.57	+0.3
3,958,296	-		CCNA_03794	0.57	-0.2
3,958,300	+		CCNA_03794	0.58	+0.3
3,958,306	-		CCNA_03794	0.59	+0.5
3,958,308	-		CCNA_03794	0.59	+0.0
3,958,323	+		CCNA_03794	0.61	-1.7
3,958,366	-		CCNA_03794	0.68	-1.4
3,958,373	-		CCNA_03794	0.69	-1.5
3,958,403	+		CCNA_03794	0.74	-0.8
3,958,427	+		CCNA_03794	0.77	-0.2
3,958,437	-		CCNA_03794	0.79	-0.2
3,958,443	-		CCNA_03794	0.80	+2.3
3,958,443	-		CCNA_03794	0.80	-0.5
3,958,450	+		CCNA_03794	0.81	-1.3
3,958,455	+		CCNA_03794	0.82	-1.0
3,958,485	+		CCNA_03794	0.86	-0.8
3,958,516	-				+0.8
3,958,601	+				+0.1
3,958,609	-				+0.5
3,958,609	-				+0.3
3,958,639	+				+0.3
3,958,644	+				-1.4
3,958,649	+				+0.8
3,958,658	+				+0.3
3,958,666	-				+0.0
3,958,727	+				-1.1
3,958,727	+				+0.8
3,958,733	-				-1.7
3,958,780	+				-0.1
3,958,790	-				-0.3
3,958,790	-				+1.6
3,958,792	+				-0.0
3,958,818	-				+0.0
3,958,847	-		CCNA_03795	0.10	+1.3
3,958,860	-		CCNA_03795	0.13	-0.3
3,958,922	+		CCNA_03795	0.27	-0.4
3,958,927	+		CCNA_03795	0.28	-0.1
3,958,935	-		CCNA_03795	0.29	-0.5
3,958,935	-				+2.3
3,959,010	-		CCNA_03795	0.46	+0.2
3,959,052	-		CCNA_03795	0.55	+1.3
3,959,060	+		CCNA_03795	0.57	+0.5
3,959,060	+		CCNA_03795	0.57	+0.4
3,959,067	+		CCNA_03795	0.58	-0.4
3,959,068	-		CCNA_03795	0.58	+0.0
3,959,120	+		CCNA_03795	0.70	-0.3
3,959,128	-		CCNA_03795	0.71	-2.1
3,959,128	-		CCNA_03795	0.71	-1.1
3,959,128	-		CCNA_03795	0.71	+0.9
3,959,172	-		CCNA_03795	0.81	-1.9
3,959,179	-		CCNA_03795	0.83	+0.2
3,959,189	-		CCNA_03795	0.85	+0.4
3,959,215	+				-0.9
3,959,268	+				+0.4
3,959,268	+				+0.3
3,959,281	+				+0.1
3,959,294	-				-1.0
3,959,312	+				-0.2
3,959,339	+				+0.1
3,959,356	+				+0.3
3,959,386	-				-0.5
3,959,401	+				+0.8
3,959,417	-				-0.2
3,959,427	+				+0.5
3,959,432	-				+0.8
3,959,442	+				-3.7
3,959,443	+				+0.5
3,959,470	-				+1.8
3,959,481	+				-1.2
3,959,481	+				+0.2
3,959,489	-				-0.1
3,959,502	+				-0.9
3,959,502	+				-1.7
3,959,510	-				+0.1
3,959,510	-				+0.8
3,959,527	+				+0.2
3,959,540	-				-0.2
3,959,565	+				+1.3
3,959,566	+				+1.3
3,959,595	+				+0.2
3,959,595	+				+0.5
3,959,641	+				+0.1
3,959,641	+				+0.3
3,959,649	-		CCNA_03796	0.10	+1.0
3,959,663	-		CCNA_03796	0.11	+2.1
3,959,663	-		CCNA_03796	0.11	+1.7
3,959,711	+		CCNA_03796	0.16	+0.6
3,959,711	+		CCNA_03796	0.16	+0.7
3,959,711	+		CCNA_03796	0.16	+1.8
3,959,712	+		CCNA_03796	0.16	+0.5
3,959,712	+		CCNA_03796	0.16	+0.9
3,959,712	+		CCNA_03796	0.16	+1.2
3,959,719	-		CCNA_03796	0.17	+0.0
3,959,719	-		CCNA_03796	0.17	+1.8
3,959,719	-		CCNA_03796	0.17	+0.0
3,959,720	-		CCNA_03796	0.17	+0.2
3,959,721	+		CCNA_03796	0.17	+0.8
3,959,722	+		CCNA_03796	0.17	+0.6
3,959,727	+		CCNA_03796	0.18	+1.2
3,959,730	-		CCNA_03796	0.18	+0.6
3,959,730	-		CCNA_03796	0.18	+1.9
3,959,730	-		CCNA_03796	0.18	+0.0
3,959,732	+		CCNA_03796	0.18	+0.8
3,959,747	+		CCNA_03796	0.20	+0.5
3,959,747	+		CCNA_03796	0.20	+0.3
3,959,747	+		CCNA_03796	0.20	+0.4
3,959,755	-		CCNA_03796	0.21	+3.3
3,959,776	+		CCNA_03796	0.23	+1.6
3,959,841	+		CCNA_03796	0.29	+1.5
3,959,849	-		CCNA_03796	0.30	+0.6
3,959,885	-		CCNA_03796	0.33	+1.6
3,959,892	-		CCNA_03796	0.34	-0.0
3,959,894	+		CCNA_03796	0.34	+1.5
3,959,894	+		CCNA_03796	0.34	+1.8
3,959,894	+		CCNA_03796	0.34	+1.2
3,959,894	+		CCNA_03796	0.34	+1.2
3,959,894	+		CCNA_03796	0.34	+1.1
3,959,894	+		CCNA_03796	0.34	+1.3
3,959,894	+		CCNA_03796	0.34	+1.6
3,959,894	+		CCNA_03796	0.34	+1.4
3,959,894	+		CCNA_03796	0.34	+1.0
3,959,894	+		CCNA_03796	0.34	+1.6
3,959,894	+		CCNA_03796	0.34	+1.2
3,959,894	+		CCNA_03796	0.34	+1.1
3,959,902	-		CCNA_03796	0.35	+0.8
3,959,902	-		CCNA_03796	0.35	+1.1
3,959,902	-		CCNA_03796	0.35	+1.9
3,959,902	-		CCNA_03796	0.35	+0.5
3,959,902	-		CCNA_03796	0.35	+0.3
3,959,902	-		CCNA_03796	0.35	+0.0
3,959,902	-		CCNA_03796	0.35	-0.2
3,959,902	-		CCNA_03796	0.35	+0.0
3,959,902	-		CCNA_03796	0.35	-0.6
3,959,902	-		CCNA_03796	0.35	+0.8
3,959,902	-		CCNA_03796	0.35	-1.0
3,959,917	-		CCNA_03796	0.37	+0.8
3,959,939	-		CCNA_03796	0.39	+1.3
3,959,947	+		CCNA_03796	0.40	+1.0
3,959,947	+		CCNA_03796	0.40	+1.3
3,959,947	+		CCNA_03796	0.40	+1.3
3,959,952	+		CCNA_03796	0.40	+0.9
3,959,952	+		CCNA_03796	0.40	+1.3
3,959,952	+		CCNA_03796	0.40	+1.4
3,959,952	+		CCNA_03796	0.40	+0.9
3,959,952	+		CCNA_03796	0.40	+1.4
3,959,955	-		CCNA_03796	0.40	+1.0
3,959,960	-		CCNA_03796	0.41	-0.5
3,959,960	-		CCNA_03796	0.41	-1.2
3,959,960	-		CCNA_03796	0.41	+0.0
3,959,960	-		CCNA_03796	0.41	+0.0
3,959,979	+		CCNA_03796	0.43	+2.0
3,959,987	-		CCNA_03796	0.44	+0.7
3,960,003	+		CCNA_03796	0.45	+1.0
3,960,043	+		CCNA_03796	0.49	+0.9
3,960,051	-		CCNA_03796	0.50	+0.8
3,960,056	-		CCNA_03796	0.50	+2.3
3,960,074	-		CCNA_03796	0.52	-1.3
3,960,107	+		CCNA_03796	0.55	+1.9
3,960,107	+		CCNA_03796	0.55	+1.5
3,960,110	+		CCNA_03796	0.56	+1.9
3,960,124	+		CCNA_03796	0.57	+1.9
3,960,136	+		CCNA_03796	0.58	+1.8
3,960,151	+		CCNA_03796	0.60	+1.4
3,960,182	+		CCNA_03796	0.63	+2.0
3,960,233	-		CCNA_03796	0.68	-0.5
3,960,237	+		CCNA_03796	0.68	+1.1