Experiment: 8 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2723 and DvMF_2724 overlap by 11 nucleotides DvMF_2724 and DvMF_2725 are separated by 355 nucleotides DvMF_2725 and DvMF_2726 are separated by 853 nucleotides
DvMF_2723: DvMF_2723 - Radical SAM domain protein (RefSeq), at 3,446,611 to 3,447,765
_2723
DvMF_2724: DvMF_2724 - hypothetical protein (RefSeq), at 3,447,755 to 3,448,021
_2724
DvMF_2725: DvMF_2725 - Resolvase domain protein (RefSeq), at 3,448,377 to 3,449,063
_2725
DvMF_2726: DvMF_2726 - ParB domain protein nuclease (RefSeq), at 3,449,917 to 3,450,681
_2726
Position (kb)
3448
3449
3450 Strain fitness (log2 ratio)
-1
0
1 at 3448.083 kb on + strand at 3448.211 kb on - strand at 3448.228 kb on + strand at 3448.388 kb on - strand at 3448.509 kb on - strand, within DvMF_2725 at 3448.593 kb on + strand, within DvMF_2725 at 3449.012 kb on + strand at 3449.192 kb on + strand at 3449.300 kb on - strand at 3449.406 kb on + strand at 3449.708 kb on - strand at 3449.748 kb on + strand at 3449.766 kb on + strand at 3449.811 kb on - strand at 3449.813 kb on + strand at 3449.815 kb on + strand at 3449.815 kb on + strand at 3449.823 kb on - strand at 3449.839 kb on + strand at 3449.839 kb on + strand at 3449.839 kb on + strand at 3449.839 kb on + strand at 3449.839 kb on + strand at 3449.839 kb on + strand at 3449.847 kb on - strand at 3449.894 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 8 day starvation, 30C remove 3,448,083 + +0.3 3,448,211 - +0.7 3,448,228 + +0.5 3,448,388 - +0.4 3,448,509 - DvMF_2725 0.19 +0.3 3,448,593 + DvMF_2725 0.31 -0.2 3,449,012 + -0.5 3,449,192 + +0.2 3,449,300 - +0.4 3,449,406 + +0.4 3,449,708 - +0.5 3,449,748 + +0.7 3,449,766 + +1.0 3,449,811 - +0.4 3,449,813 + +0.3 3,449,815 + +0.5 3,449,815 + +0.2 3,449,823 - +0.0 3,449,839 + -0.3 3,449,839 + +0.6 3,449,839 + +0.5 3,449,839 + +1.0 3,449,839 + +0.1 3,449,839 + -0.2 3,449,847 - +0.7 3,449,894 + +1.3
Or see this region's nucleotide sequence