Experiment: 8 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2539 and DvMF_2540 are separated by 56 nucleotides DvMF_2540 and DvMF_2541 are separated by 134 nucleotides DvMF_2541 and DvMF_2542 are separated by 95 nucleotides
DvMF_2539: DvMF_2539 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 3,207,324 to 3,209,369
_2539
DvMF_2540: DvMF_2540 - response regulator receiver protein (RefSeq), at 3,209,426 to 3,209,878
_2540
DvMF_2541: DvMF_2541 - multi-sensor signal transduction histidine kinase (RefSeq), at 3,210,013 to 3,212,637
_2541
DvMF_2542: DvMF_2542 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 3,212,733 to 3,214,526
_2542
Position (kb)
3210
3211
3212
3213 Strain fitness (log2 ratio)
-1
0
1
2 at 3209.205 kb on - strand at 3209.256 kb on + strand at 3209.267 kb on + strand at 3209.267 kb on + strand at 3209.334 kb on - strand at 3209.334 kb on - strand at 3209.406 kb on + strand at 3209.443 kb on + strand at 3209.685 kb on + strand, within DvMF_2540 at 3209.754 kb on + strand, within DvMF_2540 at 3209.754 kb on + strand, within DvMF_2540 at 3209.762 kb on - strand, within DvMF_2540 at 3210.100 kb on - strand at 3210.140 kb on + strand at 3210.227 kb on + strand at 3210.316 kb on + strand, within DvMF_2541 at 3210.425 kb on - strand, within DvMF_2541 at 3210.602 kb on + strand, within DvMF_2541 at 3210.645 kb on + strand, within DvMF_2541 at 3210.743 kb on + strand, within DvMF_2541 at 3211.036 kb on - strand, within DvMF_2541 at 3211.124 kb on + strand, within DvMF_2541 at 3211.190 kb on - strand, within DvMF_2541 at 3211.209 kb on + strand, within DvMF_2541 at 3211.449 kb on + strand, within DvMF_2541 at 3211.564 kb on + strand, within DvMF_2541 at 3211.874 kb on + strand, within DvMF_2541 at 3211.874 kb on + strand, within DvMF_2541 at 3211.874 kb on + strand, within DvMF_2541 at 3211.874 kb on + strand, within DvMF_2541 at 3212.063 kb on + strand, within DvMF_2541 at 3212.337 kb on + strand, within DvMF_2541 at 3212.462 kb on - strand at 3212.518 kb on + strand at 3212.591 kb on - strand at 3212.694 kb on - strand at 3212.715 kb on - strand at 3212.715 kb on - strand at 3212.837 kb on - strand at 3213.129 kb on + strand, within DvMF_2542 at 3213.299 kb on - strand, within DvMF_2542 at 3213.542 kb on + strand, within DvMF_2542
Per-strain Table
Position Strand Gene LocusTag Fraction 8 day starvation, 30C remove 3,209,205 - +0.2 3,209,256 + -0.1 3,209,267 + +0.2 3,209,267 + -0.0 3,209,334 - +0.4 3,209,334 - -0.1 3,209,406 + +0.7 3,209,443 + +0.8 3,209,685 + DvMF_2540 0.57 -0.5 3,209,754 + DvMF_2540 0.72 +0.1 3,209,754 + DvMF_2540 0.72 +0.2 3,209,762 - DvMF_2540 0.74 +0.5 3,210,100 - +0.4 3,210,140 + -0.2 3,210,227 + -0.3 3,210,316 + DvMF_2541 0.12 +0.1 3,210,425 - DvMF_2541 0.16 -0.3 3,210,602 + DvMF_2541 0.22 +0.4 3,210,645 + DvMF_2541 0.24 -0.1 3,210,743 + DvMF_2541 0.28 +0.4 3,211,036 - DvMF_2541 0.39 +0.2 3,211,124 + DvMF_2541 0.42 +0.6 3,211,190 - DvMF_2541 0.45 +0.1 3,211,209 + DvMF_2541 0.46 +0.3 3,211,449 + DvMF_2541 0.55 +0.2 3,211,564 + DvMF_2541 0.59 +1.1 3,211,874 + DvMF_2541 0.71 +0.1 3,211,874 + DvMF_2541 0.71 +0.1 3,211,874 + DvMF_2541 0.71 +0.2 3,211,874 + DvMF_2541 0.71 -0.1 3,212,063 + DvMF_2541 0.78 +0.2 3,212,337 + DvMF_2541 0.89 -0.3 3,212,462 - -0.3 3,212,518 + -0.1 3,212,591 - -0.3 3,212,694 - +0.5 3,212,715 - +0.9 3,212,715 - +0.4 3,212,837 - +1.8 3,213,129 + DvMF_2542 0.22 +0.5 3,213,299 - DvMF_2542 0.32 +0.0 3,213,542 + DvMF_2542 0.45 +0.5
Or see this region's nucleotide sequence