Experiment: 8 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2482 and DvMF_2483 are separated by 371 nucleotides DvMF_2483 and DvMF_2484 are separated by 272 nucleotides
DvMF_2482: DvMF_2482 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 3,128,363 to 3,130,384
_2482
DvMF_2483: DvMF_2483 - multi-sensor hybrid histidine kinase (RefSeq), at 3,130,756 to 3,133,971
_2483
DvMF_2484: DvMF_2484 - Phosphoribosylformylglycinamidine synthase (RefSeq), at 3,134,244 to 3,137,258
_2484
Position (kb)
3130
3131
3132
3133
3134 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3129.965 kb on - strand, within DvMF_2482 at 3130.028 kb on - strand, within DvMF_2482 at 3130.028 kb on - strand, within DvMF_2482 at 3130.188 kb on + strand at 3130.226 kb on - strand at 3130.422 kb on + strand at 3130.525 kb on + strand at 3130.758 kb on + strand at 3130.766 kb on - strand at 3130.770 kb on + strand at 3130.918 kb on + strand at 3131.804 kb on + strand, within DvMF_2483 at 3131.867 kb on + strand, within DvMF_2483 at 3132.022 kb on + strand, within DvMF_2483 at 3132.030 kb on - strand, within DvMF_2483 at 3132.120 kb on + strand, within DvMF_2483 at 3132.305 kb on - strand, within DvMF_2483 at 3132.328 kb on - strand, within DvMF_2483 at 3132.340 kb on + strand, within DvMF_2483 at 3132.340 kb on + strand, within DvMF_2483 at 3132.348 kb on - strand, within DvMF_2483 at 3132.396 kb on + strand, within DvMF_2483 at 3132.404 kb on - strand, within DvMF_2483 at 3132.405 kb on - strand, within DvMF_2483 at 3132.454 kb on + strand, within DvMF_2483 at 3132.498 kb on - strand, within DvMF_2483 at 3132.516 kb on - strand, within DvMF_2483 at 3132.548 kb on + strand, within DvMF_2483 at 3132.556 kb on - strand, within DvMF_2483 at 3132.646 kb on - strand, within DvMF_2483 at 3132.646 kb on - strand, within DvMF_2483 at 3132.819 kb on - strand, within DvMF_2483 at 3132.849 kb on + strand, within DvMF_2483 at 3132.857 kb on - strand, within DvMF_2483 at 3132.857 kb on - strand, within DvMF_2483 at 3132.857 kb on - strand, within DvMF_2483 at 3133.095 kb on + strand, within DvMF_2483 at 3133.103 kb on - strand, within DvMF_2483 at 3133.356 kb on + strand, within DvMF_2483 at 3133.366 kb on + strand, within DvMF_2483 at 3133.371 kb on + strand, within DvMF_2483 at 3133.511 kb on - strand, within DvMF_2483 at 3133.605 kb on - strand, within DvMF_2483 at 3133.634 kb on - strand, within DvMF_2483 at 3133.928 kb on + strand at 3133.928 kb on + strand at 3133.992 kb on + strand at 3134.102 kb on - strand at 3134.181 kb on + strand at 3134.313 kb on - strand at 3134.313 kb on - strand at 3134.594 kb on - strand, within DvMF_2484 at 3134.809 kb on - strand, within DvMF_2484 at 3134.894 kb on + strand, within DvMF_2484 at 3134.958 kb on - strand, within DvMF_2484
Per-strain Table
Position Strand Gene LocusTag Fraction 8 day starvation, 30C remove 3,129,965 - DvMF_2482 0.79 +0.6 3,130,028 - DvMF_2482 0.82 +1.1 3,130,028 - DvMF_2482 0.82 +0.5 3,130,188 + +1.7 3,130,226 - +0.8 3,130,422 + +1.2 3,130,525 + +0.8 3,130,758 + +0.4 3,130,766 - +0.4 3,130,770 + +0.1 3,130,918 + +0.1 3,131,804 + DvMF_2483 0.33 -0.7 3,131,867 + DvMF_2483 0.35 -0.0 3,132,022 + DvMF_2483 0.39 +0.1 3,132,030 - DvMF_2483 0.40 +0.0 3,132,120 + DvMF_2483 0.42 -0.5 3,132,305 - DvMF_2483 0.48 +0.3 3,132,328 - DvMF_2483 0.49 +0.6 3,132,340 + DvMF_2483 0.49 +0.3 3,132,340 + DvMF_2483 0.49 +0.0 3,132,348 - DvMF_2483 0.50 +0.1 3,132,396 + DvMF_2483 0.51 +0.6 3,132,404 - DvMF_2483 0.51 -0.2 3,132,405 - DvMF_2483 0.51 +0.4 3,132,454 + DvMF_2483 0.53 +0.0 3,132,498 - DvMF_2483 0.54 +0.1 3,132,516 - DvMF_2483 0.55 +0.0 3,132,548 + DvMF_2483 0.56 +0.5 3,132,556 - DvMF_2483 0.56 +0.1 3,132,646 - DvMF_2483 0.59 +0.1 3,132,646 - DvMF_2483 0.59 +0.3 3,132,819 - DvMF_2483 0.64 -0.1 3,132,849 + DvMF_2483 0.65 +0.4 3,132,857 - DvMF_2483 0.65 +0.7 3,132,857 - DvMF_2483 0.65 +0.2 3,132,857 - DvMF_2483 0.65 +0.1 3,133,095 + DvMF_2483 0.73 -0.1 3,133,103 - DvMF_2483 0.73 -0.5 3,133,356 + DvMF_2483 0.81 +0.2 3,133,366 + DvMF_2483 0.81 +2.8 3,133,371 + DvMF_2483 0.81 +0.1 3,133,511 - DvMF_2483 0.86 +0.3 3,133,605 - DvMF_2483 0.89 -0.1 3,133,634 - DvMF_2483 0.89 +0.8 3,133,928 + -0.2 3,133,928 + +0.1 3,133,992 + +0.8 3,134,102 - +0.1 3,134,181 + +1.8 3,134,313 - -2.2 3,134,313 - -1.6 3,134,594 - DvMF_2484 0.12 -1.9 3,134,809 - DvMF_2484 0.19 -2.5 3,134,894 + DvMF_2484 0.22 -3.4 3,134,958 - DvMF_2484 0.24 +0.2
Or see this region's nucleotide sequence