Experiment: 8 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1974 and DvMF_1975 are separated by 10 nucleotides DvMF_1975 and DvMF_1976 overlap by 1 nucleotides DvMF_1976 and DvMF_1977 are separated by 2 nucleotides DvMF_1977 and 11504568 are separated by 186 nucleotides 11504568 and 11646931 overlap by 32 nucleotides 11646931 and 11789323 overlap by 32 nucleotides 11789323 and 11504569 are separated by 0 nucleotides 11504569 and 11646932 overlap by 35 nucleotides 11646932 and 11789324 overlap by 35 nucleotides 11789324 and 11504570 are separated by 0 nucleotides 11504570 and 11646933 overlap by 32 nucleotides 11646933 and 11789325 overlap by 32 nucleotides 11789325 and 11504571 are separated by 0 nucleotides 11504571 and 11646934 overlap by 34 nucleotides 11646934 and 11789326 overlap by 34 nucleotides 11789326 and 11504572 are separated by 0 nucleotides 11504572 and 11646935 overlap by 32 nucleotides 11646935 and 11789327 overlap by 32 nucleotides 11789327 and 11504573 are separated by 0 nucleotides 11504573 and 11646936 overlap by 33 nucleotides 11646936 and 11789328 overlap by 33 nucleotides 11789328 and 11504574 are separated by 0 nucleotides 11504574 and 11646937 overlap by 32 nucleotides 11646937 and 11789329 overlap by 32 nucleotides 11789329 and 11504575 are separated by 0 nucleotides 11504575 and 11646938 overlap by 35 nucleotides 11646938 and 11789330 overlap by 35 nucleotides 11789330 and 11504576 are separated by 0 nucleotides 11504576 and 11646939 overlap by 32 nucleotides 11646939 and 11789331 overlap by 32 nucleotides 11789331 and 11504577 are separated by 0 nucleotides 11504577 and 11646940 overlap by 35 nucleotides 11646940 and 11789332 overlap by 35 nucleotides 11789332 and 11504578 are separated by 0 nucleotides 11504578 and 11646941 overlap by 32 nucleotides 11646941 and 11789333 overlap by 32 nucleotides 11789333 and 11504579 are separated by 0 nucleotides 11504579 and 11646942 overlap by 35 nucleotides 11646942 and 11789334 overlap by 35 nucleotides 11789334 and 11504580 are separated by 0 nucleotides 11504580 and 11646943 overlap by 32 nucleotides 11646943 and 11789335 overlap by 32 nucleotides 11789335 and 11504581 are separated by 0 nucleotides 11504581 and 11646944 overlap by 33 nucleotides 11646944 and 11789336 overlap by 33 nucleotides 11789336 and 11504582 are separated by 0 nucleotides 11504582 and 11646945 overlap by 32 nucleotides 11646945 and 11789337 overlap by 32 nucleotides 11789337 and 11504583 are separated by 0 nucleotides
DvMF_1974: DvMF_1974 - CRISPR-associated protein, Csd2 family (RefSeq), at 2,441,451 to 2,442,404
_1974
DvMF_1975: DvMF_1975 - CRISPR-associated protein Cas4 (RefSeq), at 2,442,415 to 2,443,182
_1975
DvMF_1976: DvMF_1976 - CRISPR-associated protein Cas1 (RefSeq), at 2,443,182 to 2,444,213
_1976
DvMF_1977: DvMF_1977 - CRISPR-associated protein Cas2 (RefSeq), at 2,444,216 to 2,444,506
_1977
11504568 - no description, at 2,444,693 to 2,444,724
11504568
11646931 - no description, at 2,444,693 to 2,444,724
11646931
11789323 - no description, at 2,444,693 to 2,444,724
11789323
11504569 - no description, at 2,444,725 to 2,444,759
11504569
11646932 - no description, at 2,444,725 to 2,444,759
11646932
11789324 - no description, at 2,444,725 to 2,444,759
11789324
11504570 - no description, at 2,444,760 to 2,444,791
11504570
11646933 - no description, at 2,444,760 to 2,444,791
11646933
11789325 - no description, at 2,444,760 to 2,444,791
11789325
11504571 - no description, at 2,444,792 to 2,444,825
11504571
11646934 - no description, at 2,444,792 to 2,444,825
11646934
11789326 - no description, at 2,444,792 to 2,444,825
11789326
11504572 - no description, at 2,444,826 to 2,444,857
11504572
11646935 - no description, at 2,444,826 to 2,444,857
11646935
11789327 - no description, at 2,444,826 to 2,444,857
11789327
11504573 - no description, at 2,444,858 to 2,444,890
11504573
11646936 - no description, at 2,444,858 to 2,444,890
11646936
11789328 - no description, at 2,444,858 to 2,444,890
11789328
11504574 - no description, at 2,444,891 to 2,444,922
11504574
11646937 - no description, at 2,444,891 to 2,444,922
11646937
11789329 - no description, at 2,444,891 to 2,444,922
11789329
11504575 - no description, at 2,444,923 to 2,444,957
11504575
11646938 - no description, at 2,444,923 to 2,444,957
11646938
11789330 - no description, at 2,444,923 to 2,444,957
11789330
11504576 - no description, at 2,444,958 to 2,444,989
11504576
11646939 - no description, at 2,444,958 to 2,444,989
11646939
11789331 - no description, at 2,444,958 to 2,444,989
11789331
11504577 - no description, at 2,444,990 to 2,445,024
11504577
11646940 - no description, at 2,444,990 to 2,445,024
11646940
11789332 - no description, at 2,444,990 to 2,445,024
11789332
11504578 - no description, at 2,445,025 to 2,445,056
11504578
11646941 - no description, at 2,445,025 to 2,445,056
11646941
11789333 - no description, at 2,445,025 to 2,445,056
11789333
11504579 - no description, at 2,445,057 to 2,445,091
11504579
11646942 - no description, at 2,445,057 to 2,445,091
11646942
11789334 - no description, at 2,445,057 to 2,445,091
11789334
11504580 - no description, at 2,445,092 to 2,445,123
11504580
11646943 - no description, at 2,445,092 to 2,445,123
11646943
11789335 - no description, at 2,445,092 to 2,445,123
11789335
11504581 - no description, at 2,445,124 to 2,445,156
11504581
11646944 - no description, at 2,445,124 to 2,445,156
11646944
11789336 - no description, at 2,445,124 to 2,445,156
11789336
11504582 - no description, at 2,445,157 to 2,445,188
11504582
11646945 - no description, at 2,445,157 to 2,445,188
11646945
11789337 - no description, at 2,445,157 to 2,445,188
11789337
11504583 - no description, at 2,445,189 to 2,445,221
11504583
11646946 - no description, at 2,445,189 to 2,445,221
11646946
11789338 - no description, at 2,445,189 to 2,445,221
11789338
Position (kb)
2443
2444
2445 Strain fitness (log2 ratio)
-1
0
1
2 at 2442.579 kb on + strand, within DvMF_1975 at 2442.579 kb on + strand, within DvMF_1975 at 2442.579 kb on + strand, within DvMF_1975 at 2442.587 kb on - strand, within DvMF_1975 at 2442.798 kb on + strand, within DvMF_1975 at 2442.827 kb on + strand, within DvMF_1975 at 2443.300 kb on + strand, within DvMF_1976 at 2443.300 kb on + strand, within DvMF_1976 at 2443.308 kb on - strand, within DvMF_1976 at 2443.426 kb on + strand, within DvMF_1976 at 2443.553 kb on - strand, within DvMF_1976 at 2443.781 kb on - strand, within DvMF_1976 at 2443.978 kb on + strand, within DvMF_1976 at 2443.988 kb on - strand, within DvMF_1976 at 2444.099 kb on - strand, within DvMF_1976 at 2444.101 kb on - strand, within DvMF_1976 at 2444.299 kb on + strand, within DvMF_1977 at 2444.307 kb on - strand, within DvMF_1977 at 2444.358 kb on + strand, within DvMF_1977 at 2444.457 kb on - strand, within DvMF_1977 at 2444.864 kb on - strand at 2444.874 kb on - strand at 2445.009 kb on + strand at 2445.017 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 8 day starvation, 30C remove 2,442,579 + DvMF_1975 0.21 +0.4 2,442,579 + DvMF_1975 0.21 +0.4 2,442,579 + DvMF_1975 0.21 +1.2 2,442,587 - DvMF_1975 0.22 -0.3 2,442,798 + DvMF_1975 0.50 +1.0 2,442,827 + DvMF_1975 0.54 +0.6 2,443,300 + DvMF_1976 0.11 +0.5 2,443,300 + DvMF_1976 0.11 +1.3 2,443,308 - DvMF_1976 0.12 +0.7 2,443,426 + DvMF_1976 0.24 +0.4 2,443,553 - DvMF_1976 0.36 +0.7 2,443,781 - DvMF_1976 0.58 +1.0 2,443,978 + DvMF_1976 0.77 +0.6 2,443,988 - DvMF_1976 0.78 +2.0 2,444,099 - DvMF_1976 0.89 +0.4 2,444,101 - DvMF_1976 0.89 -0.3 2,444,299 + DvMF_1977 0.29 -0.0 2,444,307 - DvMF_1977 0.31 +0.7 2,444,358 + DvMF_1977 0.49 +0.5 2,444,457 - DvMF_1977 0.83 +0.6 2,444,864 - +0.6 2,444,874 - +0.4 2,445,009 + +0.4 2,445,017 - +0.6
Or see this region's nucleotide sequence