Strain Fitness in Marinobacter adhaerens HP15 around HP15_438

Experiment: m.b. Thallium(I) acetate 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_436 and HP15_437 are separated by 87 nucleotidesHP15_437 and HP15_438 are separated by 23 nucleotidesHP15_438 and HP15_439 are separated by 121 nucleotidesHP15_439 and HP15_440 overlap by 4 nucleotides HP15_436: HP15_436 - branched-chain-amino-acid aminotransferase, at 438,333 to 439,259 _436 HP15_437: HP15_437 - conserved hypothetical protein, at 439,347 to 439,754 _437 HP15_438: HP15_438 - lipopolysaccharide biosynthesis protein, at 439,778 to 440,836 _438 HP15_439: HP15_439 - lipopolysaccharide kinase, at 440,958 to 441,710 _439 HP15_440: HP15_440 - capsular polysaccharide biosynthesis protein, at 441,707 to 442,825 _440 Position (kb) 439 440 441Strain fitness (log2 ratio) -1 0 1at 439.065 kb on + strand, within HP15_436at 439.187 kb on + strandat 439.805 kb on - strandat 441.020 kb on + strandat 441.026 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml
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439,065 + HP15_436 0.79 -0.6
439,187 + +0.4
439,805 - +0.3
441,020 + -0.3
441,026 + +0.4

Or see this region's nucleotide sequence