Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_4131 and HP15_4132 are separated by 32 nucleotides HP15_4132 and HP15_4133 are separated by 43 nucleotides HP15_4133 and HP15_4134 are separated by 39 nucleotides HP15_4134 and HP15_4135 overlap by 4 nucleotides
HP15_4131: HP15_4131 - formate dehydrogenase family accessory protein FdhD, at 4,366,101 to 4,366,970
_4131
HP15_4132: HP15_4132 - hypothetical protein, at 4,367,003 to 4,367,113
_4132
HP15_4133: HP15_4133 - sulfate/tungstate uptake family ABC transporter, periplasmic substrate-binding protein, at 4,367,157 to 4,367,993
_4133
HP15_4134: HP15_4134 - ABC-type polar amino acid transport system, ATPase component, at 4,368,033 to 4,368,776
_4134
HP15_4135: HP15_4135 - binding-protein-dependent transport systems inner membrane component, at 4,368,773 to 4,369,471
_4135
Position (kb)
4367
4368 Strain fitness (log2 ratio)
-1
0
1 at 4366.169 kb on - strand at 4366.190 kb on - strand, within HP15_4131 at 4366.232 kb on + strand, within HP15_4131 at 4366.305 kb on + strand, within HP15_4131 at 4366.306 kb on + strand, within HP15_4131 at 4366.346 kb on + strand, within HP15_4131 at 4366.346 kb on + strand, within HP15_4131 at 4366.354 kb on + strand, within HP15_4131 at 4366.359 kb on - strand, within HP15_4131 at 4366.395 kb on + strand, within HP15_4131 at 4366.465 kb on + strand, within HP15_4131 at 4366.465 kb on + strand, within HP15_4131 at 4366.482 kb on + strand, within HP15_4131 at 4366.483 kb on - strand, within HP15_4131 at 4366.552 kb on + strand, within HP15_4131 at 4366.565 kb on - strand, within HP15_4131 at 4366.575 kb on - strand, within HP15_4131 at 4366.690 kb on - strand, within HP15_4131 at 4366.820 kb on - strand, within HP15_4131 at 4367.027 kb on + strand, within HP15_4132 at 4367.037 kb on - strand, within HP15_4132 at 4367.124 kb on + strand at 4367.132 kb on - strand at 4367.133 kb on + strand at 4367.133 kb on + strand at 4367.133 kb on + strand at 4367.141 kb on - strand at 4367.188 kb on - strand at 4367.348 kb on + strand, within HP15_4133 at 4367.356 kb on - strand, within HP15_4133 at 4367.425 kb on + strand, within HP15_4133 at 4367.446 kb on - strand, within HP15_4133 at 4367.454 kb on - strand, within HP15_4133 at 4367.464 kb on - strand, within HP15_4133 at 4367.520 kb on + strand, within HP15_4133 at 4367.603 kb on - strand, within HP15_4133 at 4367.613 kb on - strand, within HP15_4133 at 4367.624 kb on - strand, within HP15_4133 at 4367.774 kb on - strand, within HP15_4133 at 4367.841 kb on + strand, within HP15_4133 at 4367.858 kb on + strand, within HP15_4133 at 4367.872 kb on - strand, within HP15_4133 at 4368.025 kb on - strand at 4368.025 kb on - strand at 4368.176 kb on + strand, within HP15_4134 at 4368.176 kb on + strand, within HP15_4134 at 4368.184 kb on - strand, within HP15_4134 at 4368.241 kb on + strand, within HP15_4134 at 4368.357 kb on - strand, within HP15_4134 at 4368.367 kb on - strand, within HP15_4134 at 4368.381 kb on - strand, within HP15_4134 at 4368.404 kb on - strand, within HP15_4134 at 4368.411 kb on + strand, within HP15_4134 at 4368.429 kb on - strand, within HP15_4134 at 4368.536 kb on + strand, within HP15_4134 at 4368.621 kb on - strand, within HP15_4134 at 4368.691 kb on + strand, within HP15_4134 at 4368.699 kb on - strand, within HP15_4134 at 4368.750 kb on + strand at 4368.828 kb on + strand at 4368.862 kb on - strand, within HP15_4135 at 4368.872 kb on + strand, within HP15_4135 at 4368.912 kb on + strand, within HP15_4135 at 4368.920 kb on - strand, within HP15_4135 at 4368.922 kb on + strand, within HP15_4135 at 4368.930 kb on - strand, within HP15_4135 at 4368.991 kb on - strand, within HP15_4135
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 4,366,169 - +0.6 4,366,190 - HP15_4131 0.10 +0.3 4,366,232 + HP15_4131 0.15 -0.3 4,366,305 + HP15_4131 0.23 +0.4 4,366,306 + HP15_4131 0.24 +1.2 4,366,346 + HP15_4131 0.28 -0.5 4,366,346 + HP15_4131 0.28 +0.1 4,366,354 + HP15_4131 0.29 +0.5 4,366,359 - HP15_4131 0.30 -0.3 4,366,395 + HP15_4131 0.34 +1.0 4,366,465 + HP15_4131 0.42 +1.0 4,366,465 + HP15_4131 0.42 -0.9 4,366,482 + HP15_4131 0.44 -0.4 4,366,483 - HP15_4131 0.44 -1.1 4,366,552 + HP15_4131 0.52 +0.4 4,366,565 - HP15_4131 0.53 -0.2 4,366,575 - HP15_4131 0.54 +1.7 4,366,690 - HP15_4131 0.68 +0.1 4,366,820 - HP15_4131 0.83 +0.0 4,367,027 + HP15_4132 0.22 -0.7 4,367,037 - HP15_4132 0.31 -0.1 4,367,124 + +1.1 4,367,132 - -0.2 4,367,133 + +0.3 4,367,133 + -0.3 4,367,133 + +0.4 4,367,141 - +1.4 4,367,188 - -0.8 4,367,348 + HP15_4133 0.23 +0.5 4,367,356 - HP15_4133 0.24 +0.8 4,367,425 + HP15_4133 0.32 +0.7 4,367,446 - HP15_4133 0.35 +0.7 4,367,454 - HP15_4133 0.35 -0.5 4,367,464 - HP15_4133 0.37 +0.4 4,367,520 + HP15_4133 0.43 +0.1 4,367,603 - HP15_4133 0.53 -0.0 4,367,613 - HP15_4133 0.54 +0.4 4,367,624 - HP15_4133 0.56 +0.2 4,367,774 - HP15_4133 0.74 +1.5 4,367,841 + HP15_4133 0.82 -0.3 4,367,858 + HP15_4133 0.84 -0.5 4,367,872 - HP15_4133 0.85 +1.1 4,368,025 - -0.6 4,368,025 - +0.1 4,368,176 + HP15_4134 0.19 +1.0 4,368,176 + HP15_4134 0.19 +1.1 4,368,184 - HP15_4134 0.20 +0.1 4,368,241 + HP15_4134 0.28 +0.1 4,368,357 - HP15_4134 0.44 -0.1 4,368,367 - HP15_4134 0.45 +0.1 4,368,381 - HP15_4134 0.47 -0.2 4,368,404 - HP15_4134 0.50 -0.9 4,368,411 + HP15_4134 0.51 +1.0 4,368,429 - HP15_4134 0.53 +0.4 4,368,536 + HP15_4134 0.68 +0.5 4,368,621 - HP15_4134 0.79 -0.1 4,368,691 + HP15_4134 0.88 +0.5 4,368,699 - HP15_4134 0.90 +0.7 4,368,750 + +0.2 4,368,828 + +1.2 4,368,862 - HP15_4135 0.13 -0.3 4,368,872 + HP15_4135 0.14 +0.1 4,368,912 + HP15_4135 0.20 -0.8 4,368,920 - HP15_4135 0.21 -1.1 4,368,922 + HP15_4135 0.21 -0.3 4,368,930 - HP15_4135 0.22 +0.1 4,368,991 - HP15_4135 0.31 -0.9
Or see this region's nucleotide sequence