Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_4020 and HP15_4021 are separated by 43 nucleotides HP15_4021 and HP15_4022 are separated by 11 nucleotides
HP15_4020: HP15_4020 - regulatory protein, LysR, at 4,254,681 to 4,256,594
_4020
HP15_4021: HP15_4021 - exporters of the RND superfamily, at 4,256,638 to 4,259,103
_4021
HP15_4022: HP15_4022 - glycosyl hydrolase, BNR repeat protein, at 4,259,115 to 4,260,107
_4022
Position (kb)
4256
4257
4258
4259
4260 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4255.685 kb on + strand, within HP15_4020 at 4255.693 kb on - strand, within HP15_4020 at 4255.725 kb on + strand, within HP15_4020 at 4255.733 kb on - strand, within HP15_4020 at 4255.843 kb on + strand, within HP15_4020 at 4255.868 kb on - strand, within HP15_4020 at 4255.891 kb on + strand, within HP15_4020 at 4255.896 kb on + strand, within HP15_4020 at 4255.896 kb on + strand, within HP15_4020 at 4255.904 kb on - strand, within HP15_4020 at 4255.952 kb on - strand, within HP15_4020 at 4255.981 kb on - strand, within HP15_4020 at 4256.071 kb on - strand, within HP15_4020 at 4256.130 kb on - strand, within HP15_4020 at 4256.130 kb on - strand, within HP15_4020 at 4256.240 kb on + strand, within HP15_4020 at 4256.248 kb on - strand, within HP15_4020 at 4256.248 kb on - strand, within HP15_4020 at 4256.330 kb on + strand, within HP15_4020 at 4256.428 kb on + strand at 4256.433 kb on + strand at 4256.454 kb on + strand at 4256.455 kb on - strand at 4256.536 kb on - strand at 4256.676 kb on - strand at 4256.851 kb on + strand at 4256.915 kb on + strand, within HP15_4021 at 4257.108 kb on + strand, within HP15_4021 at 4257.111 kb on - strand, within HP15_4021 at 4257.116 kb on - strand, within HP15_4021 at 4257.168 kb on - strand, within HP15_4021 at 4257.182 kb on + strand, within HP15_4021 at 4257.182 kb on + strand, within HP15_4021 at 4257.182 kb on + strand, within HP15_4021 at 4257.182 kb on + strand, within HP15_4021 at 4257.300 kb on + strand, within HP15_4021 at 4257.377 kb on + strand, within HP15_4021 at 4257.487 kb on + strand, within HP15_4021 at 4257.505 kb on - strand, within HP15_4021 at 4257.537 kb on + strand, within HP15_4021 at 4257.566 kb on + strand, within HP15_4021 at 4257.580 kb on + strand, within HP15_4021 at 4257.706 kb on - strand, within HP15_4021 at 4257.716 kb on + strand, within HP15_4021 at 4257.716 kb on - strand, within HP15_4021 at 4257.767 kb on + strand, within HP15_4021 at 4257.833 kb on - strand, within HP15_4021 at 4257.835 kb on - strand, within HP15_4021 at 4257.893 kb on - strand, within HP15_4021 at 4257.983 kb on + strand, within HP15_4021 at 4258.083 kb on + strand, within HP15_4021 at 4258.112 kb on - strand, within HP15_4021 at 4258.132 kb on + strand, within HP15_4021 at 4258.160 kb on - strand, within HP15_4021 at 4258.170 kb on + strand, within HP15_4021 at 4258.184 kb on + strand, within HP15_4021 at 4258.190 kb on - strand, within HP15_4021 at 4258.262 kb on - strand, within HP15_4021 at 4258.263 kb on + strand, within HP15_4021 at 4258.269 kb on + strand, within HP15_4021 at 4258.308 kb on + strand, within HP15_4021 at 4258.308 kb on + strand, within HP15_4021 at 4258.385 kb on - strand, within HP15_4021 at 4258.387 kb on + strand, within HP15_4021 at 4258.387 kb on + strand, within HP15_4021 at 4258.387 kb on + strand, within HP15_4021 at 4258.395 kb on - strand, within HP15_4021 at 4258.395 kb on - strand, within HP15_4021 at 4258.425 kb on - strand, within HP15_4021 at 4258.433 kb on + strand, within HP15_4021 at 4258.435 kb on - strand, within HP15_4021 at 4258.441 kb on - strand, within HP15_4021 at 4258.578 kb on - strand, within HP15_4021 at 4258.615 kb on - strand, within HP15_4021 at 4258.615 kb on - strand, within HP15_4021 at 4258.648 kb on + strand, within HP15_4021 at 4258.789 kb on + strand, within HP15_4021 at 4258.807 kb on + strand, within HP15_4021 at 4258.817 kb on + strand, within HP15_4021 at 4258.817 kb on + strand, within HP15_4021 at 4258.825 kb on - strand, within HP15_4021 at 4258.890 kb on + strand at 4258.898 kb on - strand at 4258.910 kb on + strand at 4258.943 kb on + strand at 4258.994 kb on + strand at 4259.200 kb on + strand at 4259.200 kb on + strand at 4259.200 kb on + strand at 4259.200 kb on + strand at 4259.208 kb on - strand at 4259.242 kb on - strand, within HP15_4022 at 4259.309 kb on + strand, within HP15_4022 at 4259.344 kb on + strand, within HP15_4022 at 4259.373 kb on + strand, within HP15_4022 at 4259.432 kb on + strand, within HP15_4022 at 4259.440 kb on - strand, within HP15_4022 at 4259.454 kb on + strand, within HP15_4022 at 4259.520 kb on + strand, within HP15_4022 at 4259.528 kb on - strand, within HP15_4022 at 4259.528 kb on - strand, within HP15_4022 at 4259.533 kb on - strand, within HP15_4022 at 4259.562 kb on - strand, within HP15_4022 at 4259.633 kb on + strand, within HP15_4022 at 4259.633 kb on + strand, within HP15_4022 at 4259.633 kb on + strand, within HP15_4022 at 4259.633 kb on + strand, within HP15_4022 at 4259.641 kb on - strand, within HP15_4022 at 4259.641 kb on - strand, within HP15_4022 at 4259.641 kb on - strand, within HP15_4022 at 4259.641 kb on - strand, within HP15_4022 at 4259.643 kb on + strand, within HP15_4022 at 4259.651 kb on - strand, within HP15_4022 at 4259.651 kb on - strand, within HP15_4022 at 4259.740 kb on + strand, within HP15_4022 at 4259.850 kb on - strand, within HP15_4022 at 4259.894 kb on + strand, within HP15_4022 at 4259.920 kb on + strand, within HP15_4022 at 4260.094 kb on + strand at 4260.100 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 4,255,685 + HP15_4020 0.52 +1.5 4,255,693 - HP15_4020 0.53 -1.4 4,255,725 + HP15_4020 0.55 +0.1 4,255,733 - HP15_4020 0.55 +1.5 4,255,843 + HP15_4020 0.61 -0.7 4,255,868 - HP15_4020 0.62 +0.2 4,255,891 + HP15_4020 0.63 +0.1 4,255,896 + HP15_4020 0.63 +0.1 4,255,896 + HP15_4020 0.63 +1.9 4,255,904 - HP15_4020 0.64 +0.8 4,255,952 - HP15_4020 0.66 +0.3 4,255,981 - HP15_4020 0.68 +0.9 4,256,071 - HP15_4020 0.73 -0.1 4,256,130 - HP15_4020 0.76 -0.6 4,256,130 - HP15_4020 0.76 -0.9 4,256,240 + HP15_4020 0.81 -0.9 4,256,248 - HP15_4020 0.82 +0.9 4,256,248 - HP15_4020 0.82 +0.1 4,256,330 + HP15_4020 0.86 -0.9 4,256,428 + +0.3 4,256,433 + -1.2 4,256,454 + -0.4 4,256,455 - -0.9 4,256,536 - +1.1 4,256,676 - -0.3 4,256,851 + +0.6 4,256,915 + HP15_4021 0.11 +1.1 4,257,108 + HP15_4021 0.19 +0.1 4,257,111 - HP15_4021 0.19 +0.3 4,257,116 - HP15_4021 0.19 +0.1 4,257,168 - HP15_4021 0.21 -0.7 4,257,182 + HP15_4021 0.22 +0.4 4,257,182 + HP15_4021 0.22 +0.7 4,257,182 + HP15_4021 0.22 +0.3 4,257,182 + HP15_4021 0.22 -0.4 4,257,300 + HP15_4021 0.27 +0.4 4,257,377 + HP15_4021 0.30 -0.7 4,257,487 + HP15_4021 0.34 +0.7 4,257,505 - HP15_4021 0.35 -0.3 4,257,537 + HP15_4021 0.36 +0.5 4,257,566 + HP15_4021 0.38 -0.7 4,257,580 + HP15_4021 0.38 -0.5 4,257,706 - HP15_4021 0.43 -0.4 4,257,716 + HP15_4021 0.44 -0.6 4,257,716 - HP15_4021 0.44 -0.7 4,257,767 + HP15_4021 0.46 -0.8 4,257,833 - HP15_4021 0.48 +1.1 4,257,835 - HP15_4021 0.49 +0.2 4,257,893 - HP15_4021 0.51 +0.6 4,257,983 + HP15_4021 0.55 -0.3 4,258,083 + HP15_4021 0.59 -0.2 4,258,112 - HP15_4021 0.60 -1.9 4,258,132 + HP15_4021 0.61 +0.0 4,258,160 - HP15_4021 0.62 -0.4 4,258,170 + HP15_4021 0.62 -0.3 4,258,184 + HP15_4021 0.63 -0.2 4,258,190 - HP15_4021 0.63 +0.4 4,258,262 - HP15_4021 0.66 -0.8 4,258,263 + HP15_4021 0.66 -0.2 4,258,269 + HP15_4021 0.66 +0.9 4,258,308 + HP15_4021 0.68 -0.6 4,258,308 + HP15_4021 0.68 -2.3 4,258,385 - HP15_4021 0.71 +0.0 4,258,387 + HP15_4021 0.71 -0.3 4,258,387 + HP15_4021 0.71 -0.9 4,258,387 + HP15_4021 0.71 +0.9 4,258,395 - HP15_4021 0.71 +0.3 4,258,395 - HP15_4021 0.71 +1.2 4,258,425 - HP15_4021 0.72 +1.7 4,258,433 + HP15_4021 0.73 -0.1 4,258,435 - HP15_4021 0.73 -0.9 4,258,441 - HP15_4021 0.73 -1.7 4,258,578 - HP15_4021 0.79 -0.7 4,258,615 - HP15_4021 0.80 +0.6 4,258,615 - HP15_4021 0.80 -0.4 4,258,648 + HP15_4021 0.82 +0.2 4,258,789 + HP15_4021 0.87 -0.4 4,258,807 + HP15_4021 0.88 -0.9 4,258,817 + HP15_4021 0.88 -0.0 4,258,817 + HP15_4021 0.88 -0.7 4,258,825 - HP15_4021 0.89 -0.3 4,258,890 + +0.1 4,258,898 - -0.2 4,258,910 + +0.5 4,258,943 + -1.1 4,258,994 + +0.5 4,259,200 + +0.7 4,259,200 + +0.4 4,259,200 + +1.2 4,259,200 + -0.1 4,259,208 - +0.3 4,259,242 - HP15_4022 0.13 +0.1 4,259,309 + HP15_4022 0.20 -0.7 4,259,344 + HP15_4022 0.23 -0.4 4,259,373 + HP15_4022 0.26 -0.2 4,259,432 + HP15_4022 0.32 +0.2 4,259,440 - HP15_4022 0.33 +0.9 4,259,454 + HP15_4022 0.34 -0.7 4,259,520 + HP15_4022 0.41 +0.9 4,259,528 - HP15_4022 0.42 +1.5 4,259,528 - HP15_4022 0.42 +0.9 4,259,533 - HP15_4022 0.42 +0.7 4,259,562 - HP15_4022 0.45 -0.1 4,259,633 + HP15_4022 0.52 +0.7 4,259,633 + HP15_4022 0.52 +1.5 4,259,633 + HP15_4022 0.52 -0.6 4,259,633 + HP15_4022 0.52 +0.4 4,259,641 - HP15_4022 0.53 -0.3 4,259,641 - HP15_4022 0.53 -0.2 4,259,641 - HP15_4022 0.53 -0.3 4,259,641 - HP15_4022 0.53 +0.6 4,259,643 + HP15_4022 0.53 +0.4 4,259,651 - HP15_4022 0.54 +0.4 4,259,651 - HP15_4022 0.54 +0.6 4,259,740 + HP15_4022 0.63 -0.8 4,259,850 - HP15_4022 0.74 +0.3 4,259,894 + HP15_4022 0.78 +1.4 4,259,920 + HP15_4022 0.81 -0.9 4,260,094 + +0.1 4,260,100 - -0.6
Or see this region's nucleotide sequence