Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3770 and HP15_3771 are separated by 248 nucleotides HP15_3771 and HP15_3772 are separated by 36 nucleotides
HP15_3770: HP15_3770 - MATE efflux family protein, at 3,991,408 to 3,992,736
_3770
HP15_3771: HP15_3771 - membrane protein containing cytochrome c oxidase, subunit II domain, at 3,992,985 to 3,994,064
_3771
HP15_3772: HP15_3772 - cytochrome c oxidase, subunit I, at 3,994,101 to 3,995,705
_3772
Position (kb)
3992
3993
3994
3995 Strain fitness (log2 ratio)
-1
0
1
2 at 3991.985 kb on + strand, within HP15_3770 at 3991.995 kb on + strand, within HP15_3770 at 3992.069 kb on + strand, within HP15_3770 at 3992.081 kb on + strand, within HP15_3770 at 3992.166 kb on + strand, within HP15_3770 at 3992.174 kb on - strand, within HP15_3770 at 3992.401 kb on + strand, within HP15_3770 at 3992.404 kb on - strand, within HP15_3770 at 3992.501 kb on + strand, within HP15_3770 at 3992.501 kb on + strand, within HP15_3770 at 3992.501 kb on + strand, within HP15_3770 at 3992.501 kb on + strand, within HP15_3770 at 3992.501 kb on + strand, within HP15_3770 at 3992.501 kb on + strand, within HP15_3770 at 3992.501 kb on + strand, within HP15_3770 at 3992.509 kb on - strand, within HP15_3770 at 3992.509 kb on - strand, within HP15_3770 at 3992.509 kb on - strand, within HP15_3770 at 3992.509 kb on - strand, within HP15_3770 at 3992.509 kb on - strand, within HP15_3770 at 3992.509 kb on - strand, within HP15_3770 at 3992.509 kb on - strand, within HP15_3770 at 3992.552 kb on + strand, within HP15_3770 at 3992.582 kb on - strand, within HP15_3770 at 3992.621 kb on + strand at 3992.661 kb on + strand at 3992.661 kb on + strand at 3992.661 kb on + strand at 3992.687 kb on - strand at 3992.689 kb on + strand at 3992.697 kb on - strand at 3992.697 kb on - strand at 3992.697 kb on - strand at 3992.704 kb on - strand at 3992.823 kb on + strand at 3992.842 kb on - strand at 3992.852 kb on - strand at 3992.866 kb on + strand at 3992.887 kb on - strand at 3992.923 kb on - strand at 3992.979 kb on + strand at 3992.988 kb on - strand at 3993.002 kb on - strand at 3993.028 kb on + strand at 3993.028 kb on + strand at 3993.036 kb on - strand at 3993.036 kb on - strand at 3993.120 kb on + strand, within HP15_3771 at 3993.304 kb on - strand, within HP15_3771 at 3993.418 kb on - strand, within HP15_3771 at 3993.499 kb on + strand, within HP15_3771 at 3993.507 kb on - strand, within HP15_3771 at 3993.512 kb on - strand, within HP15_3771 at 3993.570 kb on + strand, within HP15_3771 at 3993.570 kb on + strand, within HP15_3771 at 3993.633 kb on + strand, within HP15_3771 at 3993.641 kb on - strand, within HP15_3771 at 3993.685 kb on + strand, within HP15_3771 at 3993.686 kb on + strand, within HP15_3771 at 3993.709 kb on - strand, within HP15_3771 at 3993.785 kb on + strand, within HP15_3771 at 3994.183 kb on - strand at 3994.213 kb on - strand at 3994.295 kb on + strand, within HP15_3772 at 3994.303 kb on - strand, within HP15_3772 at 3994.356 kb on + strand, within HP15_3772 at 3994.484 kb on + strand, within HP15_3772 at 3994.484 kb on + strand, within HP15_3772 at 3994.492 kb on - strand, within HP15_3772 at 3994.517 kb on + strand, within HP15_3772 at 3994.563 kb on + strand, within HP15_3772 at 3994.563 kb on + strand, within HP15_3772 at 3994.568 kb on + strand, within HP15_3772 at 3994.576 kb on + strand, within HP15_3772 at 3994.589 kb on + strand, within HP15_3772 at 3994.599 kb on + strand, within HP15_3772 at 3994.607 kb on - strand, within HP15_3772 at 3994.669 kb on + strand, within HP15_3772 at 3994.719 kb on + strand, within HP15_3772 at 3994.774 kb on - strand, within HP15_3772 at 3994.856 kb on + strand, within HP15_3772 at 3994.864 kb on - strand, within HP15_3772 at 3994.868 kb on + strand, within HP15_3772 at 3994.876 kb on - strand, within HP15_3772 at 3994.890 kb on + strand, within HP15_3772 at 3994.892 kb on + strand, within HP15_3772 at 3994.892 kb on + strand, within HP15_3772 at 3994.900 kb on + strand, within HP15_3772 at 3994.908 kb on - strand, within HP15_3772 at 3995.022 kb on - strand, within HP15_3772 at 3995.034 kb on - strand, within HP15_3772
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 3,991,985 + HP15_3770 0.43 +0.1 3,991,995 + HP15_3770 0.44 +0.6 3,992,069 + HP15_3770 0.50 +0.2 3,992,081 + HP15_3770 0.51 +0.5 3,992,166 + HP15_3770 0.57 +0.7 3,992,174 - HP15_3770 0.58 +0.2 3,992,401 + HP15_3770 0.75 -0.8 3,992,404 - HP15_3770 0.75 -0.6 3,992,501 + HP15_3770 0.82 -0.8 3,992,501 + HP15_3770 0.82 -0.1 3,992,501 + HP15_3770 0.82 +0.2 3,992,501 + HP15_3770 0.82 -0.1 3,992,501 + HP15_3770 0.82 +0.2 3,992,501 + HP15_3770 0.82 -0.8 3,992,501 + HP15_3770 0.82 -0.8 3,992,509 - HP15_3770 0.83 -1.1 3,992,509 - HP15_3770 0.83 +0.1 3,992,509 - HP15_3770 0.83 +0.7 3,992,509 - HP15_3770 0.83 +0.1 3,992,509 - HP15_3770 0.83 -1.0 3,992,509 - HP15_3770 0.83 +0.6 3,992,509 - HP15_3770 0.83 -0.2 3,992,552 + HP15_3770 0.86 +0.4 3,992,582 - HP15_3770 0.88 +1.8 3,992,621 + -0.0 3,992,661 + +0.9 3,992,661 + +0.6 3,992,661 + +0.8 3,992,687 - -0.7 3,992,689 + +1.8 3,992,697 - +0.5 3,992,697 - +0.6 3,992,697 - +1.4 3,992,704 - -0.5 3,992,823 + +1.1 3,992,842 - -0.5 3,992,852 - +0.9 3,992,866 + +0.5 3,992,887 - +0.4 3,992,923 - +0.3 3,992,979 + -1.1 3,992,988 - +0.8 3,993,002 - +0.6 3,993,028 + -0.4 3,993,028 + +0.4 3,993,036 - +0.0 3,993,036 - +0.2 3,993,120 + HP15_3771 0.12 +1.2 3,993,304 - HP15_3771 0.30 +0.2 3,993,418 - HP15_3771 0.40 +0.2 3,993,499 + HP15_3771 0.48 -0.1 3,993,507 - HP15_3771 0.48 -0.4 3,993,512 - HP15_3771 0.49 -1.0 3,993,570 + HP15_3771 0.54 +0.2 3,993,570 + HP15_3771 0.54 -0.6 3,993,633 + HP15_3771 0.60 +0.4 3,993,641 - HP15_3771 0.61 +0.8 3,993,685 + HP15_3771 0.65 +0.8 3,993,686 + HP15_3771 0.65 -0.1 3,993,709 - HP15_3771 0.67 -0.0 3,993,785 + HP15_3771 0.74 -0.2 3,994,183 - +0.6 3,994,213 - -0.2 3,994,295 + HP15_3772 0.12 +0.6 3,994,303 - HP15_3772 0.13 +0.5 3,994,356 + HP15_3772 0.16 -1.2 3,994,484 + HP15_3772 0.24 -0.6 3,994,484 + HP15_3772 0.24 -1.0 3,994,492 - HP15_3772 0.24 -0.2 3,994,517 + HP15_3772 0.26 +1.0 3,994,563 + HP15_3772 0.29 -1.6 3,994,563 + HP15_3772 0.29 -0.1 3,994,568 + HP15_3772 0.29 +0.5 3,994,576 + HP15_3772 0.30 +0.6 3,994,589 + HP15_3772 0.30 -0.1 3,994,599 + HP15_3772 0.31 +0.4 3,994,607 - HP15_3772 0.32 -0.3 3,994,669 + HP15_3772 0.35 -0.2 3,994,719 + HP15_3772 0.39 +0.1 3,994,774 - HP15_3772 0.42 -0.4 3,994,856 + HP15_3772 0.47 -0.4 3,994,864 - HP15_3772 0.48 +0.1 3,994,868 + HP15_3772 0.48 +0.5 3,994,876 - HP15_3772 0.48 -0.9 3,994,890 + HP15_3772 0.49 -0.8 3,994,892 + HP15_3772 0.49 -0.5 3,994,892 + HP15_3772 0.49 +1.8 3,994,900 + HP15_3772 0.50 +0.1 3,994,908 - HP15_3772 0.50 -1.0 3,995,022 - HP15_3772 0.57 +0.4 3,995,034 - HP15_3772 0.58 +0.1
Or see this region's nucleotide sequence