Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2936 and HP15_2937 overlap by 4 nucleotides HP15_2937 and HP15_2938 overlap by 4 nucleotides HP15_2938 and HP15_2939 are separated by 156 nucleotides HP15_2939 and HP15_2940 are separated by 17 nucleotides
HP15_2936: HP15_2936 - periplasmic sensor signal transduction histidine kinase, at 3,078,059 to 3,079,396
_2936
HP15_2937: HP15_2937 - two component transcriptional regulator, winged helix family, at 3,079,393 to 3,080,064
_2937
HP15_2938: HP15_2938 - propeptide, PepSY amd peptidase M4, at 3,080,061 to 3,080,432
_2938
HP15_2939: HP15_2939 - conserved hypothetical protein, secreted, at 3,080,589 to 3,081,059
_2939
HP15_2940: HP15_2940 - conserved hypothetical protein, at 3,081,077 to 3,082,999
_2940
Position (kb)
3080
3081 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3079.204 kb on + strand, within HP15_2936 at 3079.237 kb on + strand, within HP15_2936 at 3079.268 kb on + strand at 3079.421 kb on + strand at 3079.523 kb on + strand, within HP15_2937 at 3079.578 kb on + strand, within HP15_2937 at 3079.650 kb on - strand, within HP15_2937 at 3079.704 kb on - strand, within HP15_2937 at 3079.814 kb on - strand, within HP15_2937 at 3079.871 kb on + strand, within HP15_2937 at 3080.312 kb on - strand, within HP15_2938 at 3080.442 kb on - strand at 3080.487 kb on + strand at 3080.572 kb on + strand at 3080.673 kb on + strand, within HP15_2939 at 3080.714 kb on + strand, within HP15_2939 at 3080.796 kb on - strand, within HP15_2939 at 3080.832 kb on - strand, within HP15_2939 at 3080.923 kb on + strand, within HP15_2939 at 3080.923 kb on + strand, within HP15_2939 at 3080.971 kb on + strand, within HP15_2939 at 3080.971 kb on + strand, within HP15_2939 at 3080.979 kb on - strand, within HP15_2939 at 3081.037 kb on - strand at 3081.212 kb on + strand at 3081.212 kb on + strand at 3081.220 kb on - strand at 3081.242 kb on - strand at 3081.242 kb on - strand at 3081.281 kb on - strand, within HP15_2940 at 3081.308 kb on - strand, within HP15_2940 at 3081.336 kb on + strand, within HP15_2940 at 3081.357 kb on + strand, within HP15_2940 at 3081.357 kb on + strand, within HP15_2940 at 3081.365 kb on - strand, within HP15_2940 at 3081.384 kb on - strand, within HP15_2940 at 3081.392 kb on + strand, within HP15_2940 at 3081.397 kb on + strand, within HP15_2940 at 3081.410 kb on - strand, within HP15_2940 at 3081.426 kb on + strand, within HP15_2940 at 3081.428 kb on - strand, within HP15_2940
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 3,079,204 + HP15_2936 0.86 -0.4 3,079,237 + HP15_2936 0.88 -2.8 3,079,268 + +0.0 3,079,421 + +1.3 3,079,523 + HP15_2937 0.19 +0.9 3,079,578 + HP15_2937 0.28 +0.8 3,079,650 - HP15_2937 0.38 -0.8 3,079,704 - HP15_2937 0.46 -0.8 3,079,814 - HP15_2937 0.63 +0.1 3,079,871 + HP15_2937 0.71 +0.5 3,080,312 - HP15_2938 0.67 -0.6 3,080,442 - -0.4 3,080,487 + +0.6 3,080,572 + -0.7 3,080,673 + HP15_2939 0.18 +2.6 3,080,714 + HP15_2939 0.27 +0.0 3,080,796 - HP15_2939 0.44 +0.4 3,080,832 - HP15_2939 0.52 -0.3 3,080,923 + HP15_2939 0.71 +0.2 3,080,923 + HP15_2939 0.71 -0.3 3,080,971 + HP15_2939 0.81 -0.3 3,080,971 + HP15_2939 0.81 +0.7 3,080,979 - HP15_2939 0.83 +1.0 3,081,037 - +0.1 3,081,212 + +0.6 3,081,212 + -0.3 3,081,220 - +0.8 3,081,242 - -0.5 3,081,242 - +0.0 3,081,281 - HP15_2940 0.11 +0.3 3,081,308 - HP15_2940 0.12 -0.2 3,081,336 + HP15_2940 0.13 +0.6 3,081,357 + HP15_2940 0.15 -0.7 3,081,357 + HP15_2940 0.15 -1.4 3,081,365 - HP15_2940 0.15 +1.2 3,081,384 - HP15_2940 0.16 -0.3 3,081,392 + HP15_2940 0.16 +0.6 3,081,397 + HP15_2940 0.17 -0.3 3,081,410 - HP15_2940 0.17 -0.3 3,081,426 + HP15_2940 0.18 +0.5 3,081,428 - HP15_2940 0.18 +0.4
Or see this region's nucleotide sequence