Strain Fitness in Marinobacter adhaerens HP15 around HP15_2928

Experiment: m.b. Thallium(I) acetate 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2927 and HP15_2928 are separated by 110 nucleotidesHP15_2928 and HP15_2929 overlap by 18 nucleotides HP15_2927: HP15_2927 - conserved hypothetical protein, membrane, at 3,065,931 to 3,067,160 _2927 HP15_2928: HP15_2928 - signal transduction protein, at 3,067,271 to 3,068,320 _2928 HP15_2929: HP15_2929 - ribonuclease BN, at 3,068,303 to 3,069,664 _2929 Position (kb) 3067 3068 3069Strain fitness (log2 ratio) -1 0 1 2 3at 3066.472 kb on - strand, within HP15_2927at 3066.506 kb on - strand, within HP15_2927at 3066.523 kb on + strand, within HP15_2927at 3066.583 kb on + strand, within HP15_2927at 3066.779 kb on + strand, within HP15_2927at 3066.779 kb on + strand, within HP15_2927at 3066.779 kb on + strand, within HP15_2927at 3066.787 kb on - strand, within HP15_2927at 3066.787 kb on - strand, within HP15_2927at 3066.787 kb on - strand, within HP15_2927at 3066.826 kb on - strand, within HP15_2927at 3066.851 kb on + strand, within HP15_2927at 3066.882 kb on + strand, within HP15_2927at 3066.945 kb on + strand, within HP15_2927at 3066.953 kb on - strand, within HP15_2927at 3066.977 kb on + strand, within HP15_2927at 3066.977 kb on + strand, within HP15_2927at 3067.018 kb on - strand, within HP15_2927at 3067.020 kb on - strand, within HP15_2927at 3067.131 kb on + strandat 3067.210 kb on + strandat 3067.210 kb on + strandat 3067.356 kb on - strandat 3067.395 kb on + strand, within HP15_2928at 3067.468 kb on - strand, within HP15_2928at 3067.503 kb on + strand, within HP15_2928at 3067.583 kb on + strand, within HP15_2928at 3067.675 kb on - strand, within HP15_2928at 3067.737 kb on + strand, within HP15_2928at 3067.814 kb on - strand, within HP15_2928at 3067.841 kb on + strand, within HP15_2928at 3067.841 kb on + strand, within HP15_2928at 3067.841 kb on + strand, within HP15_2928at 3067.841 kb on + strand, within HP15_2928at 3067.849 kb on - strand, within HP15_2928at 3067.906 kb on + strand, within HP15_2928at 3068.051 kb on - strand, within HP15_2928at 3068.177 kb on - strand, within HP15_2928at 3068.185 kb on - strand, within HP15_2928at 3068.187 kb on + strand, within HP15_2928at 3068.218 kb on - strandat 3068.281 kb on - strandat 3068.467 kb on + strand, within HP15_2929at 3068.485 kb on - strand, within HP15_2929at 3068.564 kb on + strand, within HP15_2929at 3068.604 kb on - strand, within HP15_2929at 3068.658 kb on + strand, within HP15_2929at 3068.661 kb on - strand, within HP15_2929at 3068.824 kb on - strand, within HP15_2929at 3068.917 kb on - strand, within HP15_2929at 3068.952 kb on - strand, within HP15_2929at 3068.957 kb on - strand, within HP15_2929at 3069.269 kb on - strand, within HP15_2929at 3069.273 kb on + strand, within HP15_2929at 3069.281 kb on - strand, within HP15_2929

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml
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3,066,472 - HP15_2927 0.44 +0.6
3,066,506 - HP15_2927 0.47 +0.4
3,066,523 + HP15_2927 0.48 +0.6
3,066,583 + HP15_2927 0.53 -1.1
3,066,779 + HP15_2927 0.69 -0.8
3,066,779 + HP15_2927 0.69 +0.2
3,066,779 + HP15_2927 0.69 +0.3
3,066,787 - HP15_2927 0.70 +0.7
3,066,787 - HP15_2927 0.70 -1.3
3,066,787 - HP15_2927 0.70 -1.2
3,066,826 - HP15_2927 0.73 +0.5
3,066,851 + HP15_2927 0.75 +0.0
3,066,882 + HP15_2927 0.77 +2.0
3,066,945 + HP15_2927 0.82 -1.0
3,066,953 - HP15_2927 0.83 +0.5
3,066,977 + HP15_2927 0.85 -1.5
3,066,977 + HP15_2927 0.85 +2.9
3,067,018 - HP15_2927 0.88 +0.0
3,067,020 - HP15_2927 0.89 +0.0
3,067,131 + -0.6
3,067,210 + +0.6
3,067,210 + +0.8
3,067,356 - -0.7
3,067,395 + HP15_2928 0.12 +1.3
3,067,468 - HP15_2928 0.19 +0.6
3,067,503 + HP15_2928 0.22 +1.4
3,067,583 + HP15_2928 0.30 -1.0
3,067,675 - HP15_2928 0.38 +0.6
3,067,737 + HP15_2928 0.44 +0.1
3,067,814 - HP15_2928 0.52 +0.9
3,067,841 + HP15_2928 0.54 +2.0
3,067,841 + HP15_2928 0.54 +0.4
3,067,841 + HP15_2928 0.54 -0.4
3,067,841 + HP15_2928 0.54 +0.1
3,067,849 - HP15_2928 0.55 +0.7
3,067,906 + HP15_2928 0.60 +0.2
3,068,051 - HP15_2928 0.74 +0.6
3,068,177 - HP15_2928 0.86 +0.5
3,068,185 - HP15_2928 0.87 +0.8
3,068,187 + HP15_2928 0.87 +0.0
3,068,218 - +0.8
3,068,281 - -0.2
3,068,467 + HP15_2929 0.12 +0.1
3,068,485 - HP15_2929 0.13 -0.3
3,068,564 + HP15_2929 0.19 +0.4
3,068,604 - HP15_2929 0.22 +0.0
3,068,658 + HP15_2929 0.26 -0.4
3,068,661 - HP15_2929 0.26 +0.4
3,068,824 - HP15_2929 0.38 -0.9
3,068,917 - HP15_2929 0.45 -0.1
3,068,952 - HP15_2929 0.48 +0.0
3,068,957 - HP15_2929 0.48 -0.3
3,069,269 - HP15_2929 0.71 -0.6
3,069,273 + HP15_2929 0.71 -1.0
3,069,281 - HP15_2929 0.72 +0.5

Or see this region's nucleotide sequence