Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_186 and HP15_187 are separated by 163 nucleotides HP15_187 and HP15_188 are separated by 129 nucleotides HP15_188 and HP15_189 are separated by 15 nucleotides
HP15_186: HP15_186 - two-component sensor, at 176,240 to 177,595
_186
HP15_187: HP15_187 - conserved hypothetical protein, secreted, at 177,759 to 178,142
_187
HP15_188: HP15_188 - plasmid pTOM9 ORF1-like protein, at 178,272 to 178,925
_188
HP15_189: HP15_189 - plasmidpTOM9-like protein, at 178,941 to 179,636
_189
Position (kb) 177
178
179 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 176.764 kb on - strand, within HP15_186 at 176.787 kb on + strand, within HP15_186 at 177.136 kb on - strand, within HP15_186 at 177.178 kb on + strand, within HP15_186 at 177.221 kb on - strand, within HP15_186 at 177.235 kb on + strand, within HP15_186 at 177.293 kb on + strand, within HP15_186 at 177.293 kb on + strand, within HP15_186 at 177.293 kb on + strand, within HP15_186 at 177.323 kb on - strand, within HP15_186 at 177.325 kb on + strand, within HP15_186 at 177.335 kb on - strand, within HP15_186 at 177.337 kb on - strand, within HP15_186 at 177.352 kb on + strand, within HP15_186 at 177.360 kb on - strand, within HP15_186 at 177.360 kb on - strand, within HP15_186 at 177.362 kb on - strand, within HP15_186 at 177.465 kb on + strand at 177.473 kb on - strand at 177.473 kb on - strand at 177.499 kb on + strand at 177.563 kb on + strand at 177.604 kb on + strand at 177.651 kb on + strand at 177.655 kb on - strand at 177.686 kb on - strand at 177.693 kb on + strand at 177.693 kb on + strand at 177.695 kb on - strand at 177.701 kb on - strand at 177.713 kb on - strand at 177.720 kb on - strand at 177.720 kb on - strand at 177.720 kb on - strand at 177.862 kb on + strand, within HP15_187 at 177.868 kb on - strand, within HP15_187 at 177.916 kb on + strand, within HP15_187 at 177.922 kb on - strand, within HP15_187 at 177.924 kb on - strand, within HP15_187 at 177.962 kb on + strand, within HP15_187 at 177.964 kb on + strand, within HP15_187 at 178.016 kb on + strand, within HP15_187 at 178.051 kb on + strand, within HP15_187 at 178.181 kb on - strand at 178.253 kb on + strand at 178.283 kb on - strand at 178.320 kb on - strand at 178.360 kb on + strand, within HP15_188 at 178.496 kb on - strand, within HP15_188 at 178.583 kb on + strand, within HP15_188 at 178.590 kb on + strand, within HP15_188 at 178.629 kb on - strand, within HP15_188 at 178.678 kb on + strand, within HP15_188 at 178.686 kb on - strand, within HP15_188 at 178.734 kb on - strand, within HP15_188 at 178.747 kb on + strand, within HP15_188 at 178.863 kb on + strand at 178.863 kb on + strand at 178.863 kb on + strand at 178.956 kb on + strand at 179.036 kb on + strand, within HP15_189 at 179.076 kb on - strand, within HP15_189
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 176,764 - HP15_186 0.39 -0.1 176,787 + HP15_186 0.40 +0.4 177,136 - HP15_186 0.66 +1.0 177,178 + HP15_186 0.69 +0.5 177,221 - HP15_186 0.72 -0.0 177,235 + HP15_186 0.73 -0.7 177,293 + HP15_186 0.78 +0.5 177,293 + HP15_186 0.78 -0.2 177,293 + HP15_186 0.78 +0.0 177,323 - HP15_186 0.80 +0.7 177,325 + HP15_186 0.80 -0.2 177,335 - HP15_186 0.81 -0.1 177,337 - HP15_186 0.81 -0.1 177,352 + HP15_186 0.82 -0.1 177,360 - HP15_186 0.83 +0.5 177,360 - HP15_186 0.83 -0.4 177,362 - HP15_186 0.83 +0.6 177,465 + -0.4 177,473 - +0.0 177,473 - -2.9 177,499 + +0.5 177,563 + +0.1 177,604 + +0.3 177,651 + -0.7 177,655 - -0.9 177,686 - +0.5 177,693 + -0.3 177,693 + -0.0 177,695 - -0.6 177,701 - +0.1 177,713 - -0.3 177,720 - +0.8 177,720 - +0.3 177,720 - -0.5 177,862 + HP15_187 0.27 -2.0 177,868 - HP15_187 0.28 -0.7 177,916 + HP15_187 0.41 -0.4 177,922 - HP15_187 0.42 +0.4 177,924 - HP15_187 0.43 -1.0 177,962 + HP15_187 0.53 +0.8 177,964 + HP15_187 0.53 -1.1 178,016 + HP15_187 0.67 +0.3 178,051 + HP15_187 0.76 -0.4 178,181 - -0.5 178,253 + +0.0 178,283 - +0.8 178,320 - +0.5 178,360 + HP15_188 0.13 -0.5 178,496 - HP15_188 0.34 +0.6 178,583 + HP15_188 0.48 +1.0 178,590 + HP15_188 0.49 +0.8 178,629 - HP15_188 0.55 -0.1 178,678 + HP15_188 0.62 +0.8 178,686 - HP15_188 0.63 +1.2 178,734 - HP15_188 0.71 -0.5 178,747 + HP15_188 0.73 +0.4 178,863 + +0.9 178,863 + +0.0 178,863 + +0.2 178,956 + +0.8 179,036 + HP15_189 0.14 +0.1 179,076 - HP15_189 0.19 +0.1
Or see this region's nucleotide sequence