Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02413

Experiment: PYE 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 12 days
2,556,001	+				-1.9
2,556,003	+				-1.2
2,556,003	+				-1.6
2,556,003	+				+1.7
2,556,006	-				-1.7
2,556,011	-				+0.7
2,556,011	-				-1.5
2,556,011	-				-3.0
2,556,011	-				+0.1
2,556,011	-				-0.9
2,556,075	-				-0.1
2,556,198	-				-1.2
2,556,227	+				+0.1
2,556,227	+				-0.5
2,556,237	+				-0.5
2,556,245	-				-0.3
2,556,266	-		CCNA_02412	0.10	+0.8
2,556,278	+		CCNA_02412	0.12	-1.7
2,556,278	+		CCNA_02412	0.12	-0.6
2,556,283	+		CCNA_02412	0.12	-0.5
2,556,286	-		CCNA_02412	0.13	+0.5
2,556,286	-		CCNA_02412	0.13	-3.1
2,556,291	-		CCNA_02412	0.14	-0.1
2,556,302	+		CCNA_02412	0.15	-0.2
2,556,320	-		CCNA_02412	0.18	+3.0
2,556,336	-		CCNA_02412	0.20	+0.1
2,556,336	-		CCNA_02412	0.20	+1.5
2,556,396	+		CCNA_02412	0.28	-1.2
2,556,409	-		CCNA_02412	0.30	+0.1
2,556,446	-		CCNA_02412	0.35	+0.1
2,556,468	+		CCNA_02412	0.38	+2.1
2,556,489	+		CCNA_02412	0.41	-0.1
2,556,489	+		CCNA_02412	0.41	+1.4
2,556,489	+		CCNA_02412	0.41	-0.9
2,556,497	-		CCNA_02412	0.42	-1.8
2,556,519	+		CCNA_02412	0.45	-1.0
2,556,520	+		CCNA_02412	0.45	+0.6
2,556,551	-		CCNA_02412	0.50	-0.5
2,556,612	+		CCNA_02412	0.58	+1.3
2,556,638	-		CCNA_02412	0.62	-2.1
2,556,667	+		CCNA_02412	0.66	+0.1
2,556,667	+		CCNA_02412	0.66	-2.8
2,556,694	-		CCNA_02412	0.69	+2.0
2,556,701	-		CCNA_02412	0.70	+2.1
2,556,712	-		CCNA_02412	0.72	+1.1
2,556,712	-		CCNA_02412	0.72	-2.4
2,556,718	+		CCNA_02412	0.73	-1.3
2,556,718	+		CCNA_02412	0.73	+0.1
2,556,718	+		CCNA_02412	0.73	+1.1
2,556,723	+		CCNA_02412	0.73	+0.6
2,556,726	+		CCNA_02412	0.74	+2.9
2,556,736	-		CCNA_02412	0.75	-0.4
2,556,749	-		CCNA_02412	0.77	+2.1
2,556,751	+		CCNA_02412	0.77	+1.9
2,556,751	+		CCNA_02412	0.77	+1.7
2,556,751	+		CCNA_02412	0.77	+0.4
2,556,759	-		CCNA_02412	0.78	-0.1
2,556,759	-		CCNA_02412	0.78	-0.0
2,556,759	-		CCNA_02412	0.78	+1.5
2,556,759	-		CCNA_02412	0.78	-1.0
2,556,759	-		CCNA_02412	0.78	-0.7
2,556,759	-		CCNA_02412	0.78	+0.9
2,556,759	-		CCNA_02412	0.78	+0.1
2,556,759	-		CCNA_02412	0.78	-0.9
2,556,933	+				-0.3
2,556,947	-				-1.0
2,557,007	+				+2.1
2,557,015	-				-0.8
2,557,015	-				-1.2
2,557,015	-				-1.6
2,557,015	-				-3.0
2,557,015	-				-1.4
2,557,026	-				-0.8
2,557,050	-				-1.9
2,557,137	-		CCNA_02413	0.12	-0.1
2,557,214	+		CCNA_02413	0.18	+0.8
2,557,215	-		CCNA_02413	0.18	-1.5
2,557,215	-		CCNA_02413	0.18	-1.6
2,557,222	+		CCNA_02413	0.19	-1.0
2,557,223	+		CCNA_02413	0.19	+1.5
2,557,224	+		CCNA_02413	0.19	+1.8
2,557,224	+		CCNA_02413	0.19	+3.1
2,557,230	-		CCNA_02413	0.20	-2.4
2,557,231	-		CCNA_02413	0.20	-2.0
2,557,231	-		CCNA_02413	0.20	-1.8
2,557,231	-		CCNA_02413	0.20	-2.1
2,557,236	-		CCNA_02413	0.20	+0.1
2,557,267	-		CCNA_02413	0.23	+0.5
2,557,286	+		CCNA_02413	0.25	+1.5
2,557,286	+		CCNA_02413	0.25	-0.9
2,557,286	+		CCNA_02413	0.25	+1.1
2,557,286	+		CCNA_02413	0.25	+0.7
2,557,286	+		CCNA_02413	0.25	+0.1
2,557,294	-		CCNA_02413	0.25	-3.8
2,557,294	-		CCNA_02413	0.25	-0.2
2,557,294	-		CCNA_02413	0.25	-2.0
2,557,320	+		CCNA_02413	0.27	-2.5
2,557,321	+		CCNA_02413	0.28	+0.1
2,557,324	-		CCNA_02413	0.28	-1.7
2,557,328	-		CCNA_02413	0.28	-1.5
2,557,339	+		CCNA_02413	0.29	-0.4
2,557,367	+		CCNA_02413	0.32	-2.8
2,557,367	+				+3.1
2,557,373	+		CCNA_02413	0.32	-0.8
2,557,374	-		CCNA_02413	0.32	-1.8
2,557,375	-		CCNA_02413	0.32	-0.1
2,557,375	-		CCNA_02413	0.32	-3.6
2,557,378	+		CCNA_02413	0.32	+3.1
2,557,381	-		CCNA_02413	0.33	-1.2
2,557,381	-		CCNA_02413	0.33	-3.6
2,557,381	-		CCNA_02413	0.33	-1.2
2,557,381	-		CCNA_02413	0.33	-3.0
2,557,386	-		CCNA_02413	0.33	+0.6
2,557,401	-		CCNA_02413	0.34	-2.7
2,557,401	-		CCNA_02413	0.34	-2.5
2,557,420	-		CCNA_02413	0.36	-3.3
2,557,435	+		CCNA_02413	0.37	-1.0
2,557,463	+		CCNA_02413	0.40	+1.1
2,557,463	+		CCNA_02413	0.40	+0.1
2,557,463	+		CCNA_02413	0.40	-1.1
2,557,463	+		CCNA_02413	0.40	+0.3
2,557,470	-		CCNA_02413	0.40	-2.7
2,557,471	-				+3.1
2,557,471	-		CCNA_02413	0.40	-2.6
2,557,471	-		CCNA_02413	0.40	-1.6
2,557,538	+		CCNA_02413	0.46	-2.0
2,557,560	-		CCNA_02413	0.48	-3.2
2,557,589	+		CCNA_02413	0.51	+1.5
2,557,589	+		CCNA_02413	0.51	+0.1
2,557,589	+		CCNA_02413	0.51	+2.1
2,557,589	+		CCNA_02413	0.51	+0.1
2,557,589	+		CCNA_02413	0.51	+1.8
2,557,589	+		CCNA_02413	0.51	-1.1
2,557,589	+		CCNA_02413	0.51	+3.1
2,557,597	-		CCNA_02413	0.51	-0.4
2,557,597	-		CCNA_02413	0.51	-1.1
2,557,597	-		CCNA_02413	0.51	-2.8
2,557,597	-		CCNA_02413	0.51	-1.6
2,557,597	-		CCNA_02413	0.51	-1.9
2,557,597	-		CCNA_02413	0.51	-0.5
2,557,597	-		CCNA_02413	0.51	-1.7
2,557,597	-		CCNA_02413	0.51	-1.4
2,557,597	-		CCNA_02413	0.51	-2.0
2,557,614	-		CCNA_02413	0.53	-1.8
2,557,624	+		CCNA_02413	0.54	-0.4
2,557,631	+		CCNA_02413	0.54	-0.8
2,557,643	+		CCNA_02413	0.55	+2.1
2,557,720	+		CCNA_02413	0.62	-1.5
2,557,729	-		CCNA_02413	0.63	+1.5
2,557,729	-		CCNA_02413	0.63	-1.4
2,557,736	+		CCNA_02413	0.63	+0.3
2,557,757	-		CCNA_02413	0.65	-0.0
2,557,759	+		CCNA_02413	0.65	+3.1
2,557,759	+		CCNA_02413	0.65	+0.8
2,557,767	-		CCNA_02413	0.66	+0.5
2,557,767	-		CCNA_02413	0.66	-2.6
2,557,795	+		CCNA_02413	0.68	-1.2
2,557,937	-		CCNA_02413	0.80	+0.8
2,557,965	+		CCNA_02413	0.83	+1.1
2,557,965	+		CCNA_02413	0.83	-0.5
2,557,968	-		CCNA_02413	0.83	-1.9
2,557,973	-		CCNA_02413	0.84	-1.6
2,557,973	-		CCNA_02413	0.84	-1.6
2,557,973	-		CCNA_02413	0.84	-2.2
2,557,974	-		CCNA_02413	0.84	-1.3
2,557,974	-		CCNA_02413	0.84	+0.3
2,558,043	-		CCNA_02413	0.90	-2.6
2,558,072	-				-1.9
2,558,099	+				+2.1
2,558,112	-				-1.6
2,558,118	-				-1.6
2,558,137	-				-2.0
2,558,164	+				-0.6
2,558,172	+				+1.5
2,558,173	-				-0.7
2,558,173	-				+0.3
2,558,175	-				+0.4
2,558,190	+				-0.9
2,558,196	+				+1.1
2,558,196	+				+2.1
2,558,204	-				+0.2
2,558,225	+				+0.3
2,558,256	-				-0.3
2,558,291	-				-0.5
2,558,346	-		CCNA_02414	0.15	+0.5
2,558,382	-		CCNA_02414	0.19	-1.0
2,558,469	-		CCNA_02414	0.27	+1.3
2,558,481	-		CCNA_02414	0.28	+2.0
2,558,494	+		CCNA_02414	0.30	+1.2
2,558,542	+		CCNA_02414	0.34	+2.1
2,558,550	-		CCNA_02414	0.35	+0.0
2,558,555	-		CCNA_02414	0.36	+0.8
2,558,557	+		CCNA_02414	0.36	+1.7
2,558,641	+		CCNA_02414	0.44	+0.1
2,558,651	+		CCNA_02414	0.45	-0.8
2,558,686	+		CCNA_02414	0.49	+1.7
2,558,707	+		CCNA_02414	0.51	+2.8
2,558,747	+		CCNA_02414	0.55	+1.2
2,558,753	+		CCNA_02414	0.55	+1.6
2,558,771	-		CCNA_02414	0.57	+2.1
2,558,783	-		CCNA_02414	0.58	+0.3
2,558,803	-		CCNA_02414	0.60	+1.4
2,558,805	+		CCNA_02414	0.60	+0.8
2,558,832	+		CCNA_02414	0.63	+0.8
2,558,832	+		CCNA_02414	0.63	+0.7
2,558,840	-		CCNA_02414	0.64	+0.8
2,558,840	-		CCNA_02414	0.64	+2.2
2,558,840	-		CCNA_02414	0.64	+0.2
2,558,874	+		CCNA_02414	0.67	+1.8
2,558,916	-		CCNA_02414	0.71	+1.0
2,558,952	-		CCNA_02414	0.75	+0.6
2,558,952	-		CCNA_02414	0.75	+0.9
2,558,963	+		CCNA_02414	0.76	-0.1
2,559,034	+		CCNA_02414	0.83	-0.4
2,559,078	-		CCNA_02414	0.87	+0.8
2,559,117	-				+0.1
2,559,123	-				-0.7
2,559,137	+				+1.3
2,559,138	-				+2.4
2,559,155	+				+1.7