Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02277

Experiment: PYE 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 12 days
2,425,782	+				-0.7
2,425,790	-				-0.2
2,425,790	-				+2.2
2,425,790	-				+0.1
2,425,790	-				-0.2
2,425,790	-				-1.2
2,425,790	-				+0.0
2,425,790	-				-1.1
2,425,795	-				-1.1
2,425,838	+				-0.1
2,425,856	+				-1.9
2,425,856	+				-1.1
2,425,856	+				-1.2
2,425,856	+				-1.5
2,425,870	+				+1.3
2,425,878	-				-0.4
2,425,907	+		CCNA_02275	0.11	+0.6
2,425,961	+		CCNA_02275	0.18	+0.1
2,425,983	+		CCNA_02275	0.21	-0.9
2,425,995	+		CCNA_02275	0.22	-2.0
2,425,995	+		CCNA_02275	0.22	+1.1
2,426,005	+		CCNA_02275	0.24	-1.8
2,426,008	-		CCNA_02275	0.24	-1.2
2,426,015	+		CCNA_02275	0.25	+0.5
2,426,015	+		CCNA_02275	0.25	-2.1
2,426,023	-		CCNA_02275	0.26	-1.3
2,426,030	-		CCNA_02275	0.27	-1.5
2,426,062	-		CCNA_02275	0.31	-1.1
2,426,112	+		CCNA_02275	0.37	-1.0
2,426,120	+		CCNA_02275	0.38	+0.1
2,426,120	+		CCNA_02275	0.38	+0.8
2,426,120	+		CCNA_02275	0.38	-1.2
2,426,128	-		CCNA_02275	0.39	-0.4
2,426,135	-		CCNA_02275	0.40	-1.7
2,426,176	+		CCNA_02275	0.45	-2.3
2,426,183	-		CCNA_02275	0.46	-0.9
2,426,191	+		CCNA_02275	0.47	-1.1
2,426,192	+		CCNA_02275	0.47	+3.1
2,426,199	-		CCNA_02275	0.48	-3.0
2,426,199	-		CCNA_02275	0.48	+0.2
2,426,199	-		CCNA_02275	0.48	-0.4
2,426,224	+		CCNA_02275	0.51	-0.6
2,426,256	+		CCNA_02275	0.55	+0.8
2,426,256	+		CCNA_02275	0.55	+0.3
2,426,256	+		CCNA_02275	0.55	+2.1
2,426,256	+		CCNA_02275	0.55	+0.5
2,426,264	-		CCNA_02275	0.56	-2.2
2,426,264	-		CCNA_02275	0.56	+2.1
2,426,264	-		CCNA_02275	0.56	-2.7
2,426,264	-		CCNA_02275	0.56	-1.5
2,426,264	-		CCNA_02275	0.56	-0.4
2,426,264	-		CCNA_02275	0.56	-1.9
2,426,264	-		CCNA_02275	0.56	-0.9
2,426,264	-		CCNA_02275	0.56	+3.4
2,426,296	+		CCNA_02275	0.61	-1.3
2,426,304	-		CCNA_02275	0.62	-0.3
2,426,316	+		CCNA_02275	0.63	+1.5
2,426,324	-		CCNA_02275	0.64	+1.6
2,426,334	-		CCNA_02275	0.65	-0.8
2,426,337	+		CCNA_02275	0.66	+0.4
2,426,337	+		CCNA_02275	0.66	+1.5
2,426,337	+		CCNA_02275	0.66	+1.1
2,426,345	-		CCNA_02275	0.67	-1.7
2,426,345	-		CCNA_02275	0.67	-0.5
2,426,345	-		CCNA_02275	0.67	+0.2
2,426,356	+		CCNA_02275	0.68	+1.5
2,426,368	-		CCNA_02275	0.70	-0.7
2,426,392	+		CCNA_02275	0.73	+1.1
2,426,465	+		CCNA_02275	0.82	+2.7
2,426,473	-		CCNA_02275	0.83	-1.3
2,426,531	+				+0.5
2,426,534	-				+1.1
2,426,539	-				-2.9
2,426,539	-				+0.4
2,426,546	+				+0.8
2,426,556	+				+0.1
2,426,556	+				+2.4
2,426,558	+				-0.4
2,426,576	+				+1.5
2,426,695	-				+1.1
2,426,751	+				+0.9
2,426,751	+				+0.5
2,426,759	-				-0.9
2,426,821	+				-0.8
2,426,900	-				+0.3
2,426,912	+				-0.6
2,426,917	+				-1.0
2,426,917	+				+0.3
2,426,917	+				+0.3
2,426,917	+				-1.4
2,426,917	+				+2.5
2,426,925	-				+0.3
2,426,947	-				-1.1
2,426,982	-				+0.5
2,427,006	+		CCNA_02277	0.11	-0.1
2,427,056	+		CCNA_02277	0.13	-1.3
2,427,085	+		CCNA_02277	0.14	-1.2
2,427,133	-		CCNA_02277	0.17	+2.1
2,427,146	+		CCNA_02277	0.17	+2.7
2,427,172	+		CCNA_02277	0.18	-1.8
2,427,178	+		CCNA_02277	0.19	+2.1
2,427,224	-		CCNA_02277	0.21	+0.3
2,427,358	-		CCNA_02277	0.27	+0.3
2,427,363	-		CCNA_02277	0.27	-0.3
2,427,370	+		CCNA_02277	0.27	-1.5
2,427,373	-		CCNA_02277	0.27	-0.6
2,427,422	-		CCNA_02277	0.30	+0.9
2,427,435	-		CCNA_02277	0.30	+0.3
2,427,437	-		CCNA_02277	0.30	+3.5
2,427,452	+		CCNA_02277	0.31	-0.1
2,427,452	+		CCNA_02277	0.31	+0.0
2,427,457	+		CCNA_02277	0.31	-0.7
2,427,460	-		CCNA_02277	0.31	-2.0
2,427,481	+		CCNA_02277	0.32	+0.8
2,427,482	+		CCNA_02277	0.32	+0.8
2,427,501	-		CCNA_02277	0.33	+2.1
2,427,523	+		CCNA_02277	0.34	-1.6
2,427,523	+		CCNA_02277	0.34	-0.3
2,427,523	+		CCNA_02277	0.34	+2.3
2,427,523	+		CCNA_02277	0.34	-1.7
2,427,531	-		CCNA_02277	0.35	+1.8
2,427,531	-		CCNA_02277	0.35	-0.5
2,427,531	-		CCNA_02277	0.35	+2.5
2,427,531	-		CCNA_02277	0.35	+1.5
2,427,531	-		CCNA_02277	0.35	-1.6
2,427,555	-		CCNA_02277	0.36	-0.2
2,427,563	-		CCNA_02277	0.36	-0.4
2,427,678	+		CCNA_02277	0.41	-0.1
2,427,688	+		CCNA_02277	0.42	+0.3
2,427,688	+		CCNA_02277	0.42	-2.8
2,427,688	+		CCNA_02277	0.42	-1.8
2,427,688	+		CCNA_02277	0.42	-0.1
2,427,688	+		CCNA_02277	0.42	-0.3
2,427,696	-		CCNA_02277	0.42	-0.3
2,427,696	-		CCNA_02277	0.42	+2.9
2,427,696	-		CCNA_02277	0.42	+2.1
2,427,696	-		CCNA_02277	0.42	+2.6
2,427,696	-		CCNA_02277	0.42	+1.1
2,427,742	+		CCNA_02277	0.44	-0.7
2,427,747	+		CCNA_02277	0.44	-1.3
2,427,750	-		CCNA_02277	0.45	-1.6
2,427,750	-		CCNA_02277	0.45	-1.4
2,427,750	-		CCNA_02277	0.45	+3.3
2,427,750	-		CCNA_02277	0.45	-2.3
2,427,778	+		CCNA_02277	0.46	-2.9
2,427,788	+		CCNA_02277	0.46	-0.6
2,427,801	-		CCNA_02277	0.47	-0.7
2,427,816	-		CCNA_02277	0.48	+2.1
2,427,816	-		CCNA_02277	0.48	-0.3
2,427,837	+		CCNA_02277	0.49	-1.4
2,427,849	+		CCNA_02277	0.49	-2.3
2,427,870	+		CCNA_02277	0.50	+1.2
2,427,880	+		CCNA_02277	0.50	-0.6
2,427,886	-		CCNA_02277	0.51	+0.8
2,427,888	+		CCNA_02277	0.51	-1.8
2,427,888	+		CCNA_02277	0.51	-0.1
2,427,888	+		CCNA_02277	0.51	-1.8
2,427,896	-		CCNA_02277	0.51	-0.6
2,427,919	+		CCNA_02277	0.52	-0.2
2,427,919	+		CCNA_02277	0.52	-1.3
2,427,927	-		CCNA_02277	0.53	+0.7
2,427,947	+		CCNA_02277	0.54	+2.3
2,427,947	+		CCNA_02277	0.54	-0.1
2,427,982	-		CCNA_02277	0.55	+1.3
2,428,001	+		CCNA_02277	0.56	-0.1
2,428,001	+		CCNA_02277	0.56	-0.5
2,428,023	+		CCNA_02277	0.57	-0.2
2,428,023	+		CCNA_02277	0.57	-1.5
2,428,030	-		CCNA_02277	0.57	-1.1
2,428,031	-		CCNA_02277	0.57	-1.6
2,428,031	-		CCNA_02277	0.57	+2.6
2,428,031	-		CCNA_02277	0.57	+0.5
2,428,031	-		CCNA_02277	0.57	+0.8
2,428,031	-		CCNA_02277	0.57	-0.3
2,428,051	+		CCNA_02277	0.58	+0.4
2,428,057	+		CCNA_02277	0.59	+0.1
2,428,057	+		CCNA_02277	0.59	+0.1
2,428,065	-				+1.1
2,428,078	+		CCNA_02277	0.59	-0.7
2,428,081	+		CCNA_02277	0.60	-2.0
2,428,083	+		CCNA_02277	0.60	-0.5
2,428,086	-		CCNA_02277	0.60	+0.4
2,428,086	-		CCNA_02277	0.60	-0.3
2,428,086	-		CCNA_02277	0.60	+2.8
2,428,096	-		CCNA_02277	0.60	+0.8
2,428,096	-		CCNA_02277	0.60	+2.1
2,428,105	+		CCNA_02277	0.61	-1.7
2,428,162	-		CCNA_02277	0.63	+0.3
2,428,190	-		CCNA_02277	0.65	-2.5
2,428,220	-		CCNA_02277	0.66	-0.7
2,428,275	-		CCNA_02277	0.68	-1.3
2,428,275	-		CCNA_02277	0.68	-1.5
2,428,320	-		CCNA_02277	0.70	-0.1
2,428,396	-		CCNA_02277	0.74	-3.1
2,428,435	+		CCNA_02277	0.76	+1.0
2,428,444	-		CCNA_02277	0.76	-1.8
2,428,457	+		CCNA_02277	0.77	+0.9
2,428,485	+		CCNA_02277	0.78	-1.1
2,428,493	-		CCNA_02277	0.78	-1.6
2,428,533	+		CCNA_02277	0.80	+0.2
2,428,533	+		CCNA_02277	0.80	-0.5
2,428,538	+		CCNA_02277	0.80	+1.7
2,428,541	-		CCNA_02277	0.81	-1.1
2,428,546	-		CCNA_02277	0.81	-0.1
2,428,621	+		CCNA_02277	0.84	+0.6
2,428,626	+		CCNA_02277	0.84	+1.1
2,428,629	-				+1.5
2,428,636	+		CCNA_02277	0.85	-1.4
2,428,644	-		CCNA_02277	0.85	+1.5
2,428,659	-		CCNA_02277	0.86	+2.1
2,428,661	-		CCNA_02277	0.86	+2.1
2,428,662	+		CCNA_02277	0.86	+0.1
2,428,670	+		CCNA_02277	0.86	+0.9
2,428,670	-		CCNA_02277	0.86	+3.1
2,428,736	+		CCNA_02277	0.89	-1.4
2,428,736	+		CCNA_02277	0.89	-2.3
2,428,736	+		CCNA_02277	0.89	+0.9
2,428,736	+		CCNA_02277	0.89	-1.2
2,428,746	+		CCNA_02277	0.90	-0.7
2,428,800	+				-1.1
2,428,805	+				+0.4
2,428,831	-				+4.1
2,428,889	+				+0.9
2,428,897	-				+0.5
2,428,899	-				+1.5
2,428,906	+				-1.4
2,428,925	-				-1.7
2,428,925	-				+2.1
2,428,936	+				-0.6
2,428,943	+				+0.2
2,428,944	-				+0.8
2,428,963	+				-0.3
2,429,039	-				-0.2
2,429,039	-				+0.7
2,429,096	-				+0.6
2,429,106	+				-1.5
2,429,108	-				-2.4
2,429,128	+				-1.9
2,429,157	+		CCNA_02278	0.13	-2.2
2,429,215	-		CCNA_02278	0.23	-3.2
2,429,218	+		CCNA_02278	0.23	-0.5
2,429,229	+		CCNA_02278	0.25	-1.4
2,429,239	+		CCNA_02278	0.27	-1.1
2,429,239	+		CCNA_02278	0.27	-1.8
2,429,242	-		CCNA_02278	0.27	-1.7
2,429,242	-		CCNA_02278	0.27	-2.6
2,429,247	-		CCNA_02278	0.28	+1.0
2,429,265	+		CCNA_02278	0.31	-1.7
2,429,265	+		CCNA_02278	0.31	-1.5
2,429,268	-		CCNA_02278	0.32	-1.7
2,429,268	-		CCNA_02278	0.32	+0.2
2,429,273	-		CCNA_02278	0.32	-2.3
2,429,273	-		CCNA_02278	0.32	+3.1
2,429,273	-		CCNA_02278	0.32	-0.4
2,429,273	-		CCNA_02278	0.32	-0.1
2,429,273	-		CCNA_02278	0.32	-2.0
2,429,277	+		CCNA_02278	0.33	-2.4
2,429,290	-		CCNA_02278	0.35	-2.6
2,429,309	+		CCNA_02278	0.38	-2.3
2,429,327	+		CCNA_02278	0.41	-1.7
2,429,345	+		CCNA_02278	0.44	+0.3
2,429,395	+		CCNA_02278	0.52	-1.6
2,429,411	+		CCNA_02278	0.55	-3.7
2,429,446	-		CCNA_02278	0.61	+1.1
2,429,491	+		CCNA_02278	0.68	-2.1
2,429,511	+		CCNA_02278	0.71	-2.2
2,429,538	+		CCNA_02278	0.76	+1.8
2,429,546	-		CCNA_02278	0.77	-1.4
2,429,564	+		CCNA_02278	0.80	+1.0
2,429,580	+		CCNA_02278	0.83	-2.4
2,429,594	-		CCNA_02278	0.85	+0.1
2,429,627	-				+0.4
2,429,661	-				+0.3
2,429,701	-				+0.9
2,429,718	-				+1.4
2,429,722	-				+1.9
2,429,740	+				+1.4
2,429,740	+				-0.3
2,429,740	+				-0.9
2,429,740	+				-0.3
2,429,740	+				+1.5
2,429,740	+				-0.9
2,429,740	+				+2.0
2,429,740	+				+0.6
2,429,747	+		CCNA_02279	0.10	+0.2
2,429,748	-		CCNA_02279	0.11	-1.1
2,429,797	-		CCNA_02279	0.18	-1.1
2,429,804	+		CCNA_02279	0.20	+0.7
2,429,824	-		CCNA_02279	0.23	+2.3