Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00115

Experiment: PYE 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 12 days
121,953	-				+1.3
121,954	+				-1.5
121,979	+				-0.5
122,017	+				+2.2
122,019	+				-2.4
122,027	-				-1.2
122,103	+		CCNA_00113	0.23	-0.3
122,103	+		CCNA_00113	0.23	+0.8
122,106	-		CCNA_00113	0.23	-0.6
122,111	-		CCNA_00113	0.24	-2.2
122,132	+		CCNA_00113	0.28	-0.5
122,171	+		CCNA_00113	0.35	-0.3
122,247	+		CCNA_00113	0.48	+0.6
122,248	+		CCNA_00113	0.48	-1.2
122,255	-		CCNA_00113	0.49	-2.1
122,262	-		CCNA_00113	0.51	+0.2
122,280	+		CCNA_00113	0.54	-1.3
122,292	-				+1.4
122,373	+		CCNA_00113	0.70	+0.7
122,373	+		CCNA_00113	0.70	+1.1
122,373	+		CCNA_00113	0.70	-1.8
122,373	+		CCNA_00113	0.70	-1.5
122,373	+		CCNA_00113	0.70	-0.0
122,391	+		CCNA_00113	0.73	-1.3
122,399	-		CCNA_00113	0.75	+0.2
122,399	-		CCNA_00113	0.75	+0.7
122,399	-		CCNA_00113	0.75	+0.2
122,401	+		CCNA_00113	0.75	-0.8
122,406	+		CCNA_00113	0.76	+0.6
122,425	+		CCNA_00113	0.79	+1.6
122,433	-		CCNA_00113	0.80	+1.2
122,438	+		CCNA_00113	0.81	+1.0
122,446	-		CCNA_00113	0.83	+1.0
122,514	+				+0.2
122,519	-				-0.7
122,532	-				+0.4
122,596	+		CCNA_00114	0.16	-1.8
122,608	+		CCNA_00114	0.20	+0.6
122,608	+		CCNA_00114	0.20	+1.0
122,673	+		CCNA_00114	0.41	+1.0
122,759	+		CCNA_00114	0.69	-1.0
122,759	+		CCNA_00114	0.69	+1.3
122,777	+		CCNA_00114	0.75	-0.6
122,779	+		CCNA_00114	0.76	-1.0
122,785	-		CCNA_00114	0.78	+2.7
122,787	+		CCNA_00114	0.78	+0.3
122,794	-		CCNA_00114	0.81	-1.9
122,807	-		CCNA_00114	0.85	-0.5
122,830	-				-1.1
122,881	+				+0.1
122,881	+				-0.6
122,882	+				+0.7
122,882	+				+0.2
122,923	-				+1.8
122,993	-				-0.5
122,998	-				+0.7
123,071	-				+0.1
123,087	-				+2.0
123,181	-				+0.4
123,199	+				+1.2
123,199	+				-1.7
123,199	+				-0.3
123,199	+				-1.4
123,199	+				+1.4
123,199	+				-2.3
123,199	+				-0.7
123,199	+				+1.1
123,199	+				+0.2
123,199	+				-0.7
123,199	+				+0.1
123,207	-				-0.3
123,207	-				+0.7
123,207	-				+1.3
123,207	-				+3.0
123,207	-				-0.5
123,207	-				-0.3
123,207	-				+0.3
123,276	-		CCNA_00115	0.10	-1.2
123,299	+		CCNA_00115	0.11	-0.1
123,375	+		CCNA_00115	0.13	-1.3
123,393	+		CCNA_00115	0.14	-0.2
123,481	+		CCNA_00115	0.16	-1.0
123,481	+		CCNA_00115	0.16	+0.4
123,482	+		CCNA_00115	0.16	-2.1
123,489	-		CCNA_00115	0.17	+2.0
123,521	-		CCNA_00115	0.17	+0.2
123,521	-		CCNA_00115	0.17	-2.6
123,562	-		CCNA_00115	0.19	+1.0
123,609	+		CCNA_00115	0.20	+1.0
123,638	+		CCNA_00115	0.21	-1.5
123,646	+		CCNA_00115	0.21	+0.9
123,646	+		CCNA_00115	0.21	-2.3
123,646	+		CCNA_00115	0.21	-3.6
123,646	+		CCNA_00115	0.21	-2.5
123,646	+		CCNA_00115	0.21	-1.0
123,646	+		CCNA_00115	0.21	+1.2
123,646	-		CCNA_00115	0.21	-2.1
123,646	-		CCNA_00115	0.21	-0.9
123,654	-		CCNA_00115	0.21	+0.2
123,654	-		CCNA_00115	0.21	+2.0
123,654	-		CCNA_00115	0.21	-1.1
123,661	+		CCNA_00115	0.22	-0.0
123,661	+		CCNA_00115	0.22	-0.7
123,661	+		CCNA_00115	0.22	-2.0
123,661	+		CCNA_00115	0.22	+1.2
123,661	+		CCNA_00115	0.22	-1.7
123,680	+		CCNA_00115	0.22	-0.7
123,688	-		CCNA_00115	0.22	+2.0
123,688	-		CCNA_00115	0.22	+2.0
123,688	-		CCNA_00115	0.22	-0.7
123,716	+		CCNA_00115	0.23	-0.1
123,734	-		CCNA_00115	0.24	+1.2
123,787	+		CCNA_00115	0.25	-3.1
123,787	+		CCNA_00115	0.25	-1.8
123,792	+		CCNA_00115	0.26	-0.8
123,792	+		CCNA_00115	0.26	+0.2
123,792	+		CCNA_00115	0.26	+0.1
123,792	+		CCNA_00115	0.26	-1.6
123,800	-		CCNA_00115	0.26	-1.5
123,800	-		CCNA_00115	0.26	-0.9
123,800	-		CCNA_00115	0.26	-2.6
123,800	-		CCNA_00115	0.26	+0.1
123,800	-		CCNA_00115	0.26	-2.3
123,801	-		CCNA_00115	0.26	-1.5
123,801	-		CCNA_00115	0.26	+1.4
123,802	+		CCNA_00115	0.26	+0.3
123,812	+		CCNA_00115	0.26	-0.5
123,819	-		CCNA_00115	0.26	+1.0
123,822	-		CCNA_00115	0.27	-1.9
123,853	+		CCNA_00115	0.27	-0.0
123,853	+		CCNA_00115	0.27	-1.8
123,866	+		CCNA_00115	0.28	+0.0
123,934	+		CCNA_00115	0.30	+1.0
123,934	+		CCNA_00115	0.30	+1.1
123,942	-		CCNA_00115	0.30	-0.1
123,969	-		CCNA_00115	0.31	-0.9
123,976	+		CCNA_00115	0.31	-2.9
123,995	-		CCNA_00115	0.32	-2.5
123,995	-		CCNA_00115	0.32	-2.0
124,030	-		CCNA_00115	0.33	-1.6
124,097	-		CCNA_00115	0.35	-1.3
124,097	-		CCNA_00115	0.35	+1.4
124,123	+		CCNA_00115	0.36	-1.1
124,123	+		CCNA_00115	0.36	-1.1
124,131	-		CCNA_00115	0.36	+0.1
124,149	-		CCNA_00115	0.36	-0.5
124,203	+		CCNA_00115	0.38	-2.7
124,271	+		CCNA_00115	0.40	-0.1
124,271	+		CCNA_00115	0.40	-1.7
124,271	+		CCNA_00115	0.40	-1.5
124,271	+		CCNA_00115	0.40	-1.0
124,273	+		CCNA_00115	0.40	+0.2
124,279	-				-0.0
124,279	-		CCNA_00115	0.40	-0.3
124,282	+		CCNA_00115	0.40	+0.9
124,357	+		CCNA_00115	0.43	-0.0
124,362	-		CCNA_00115	0.43	-0.8
124,367	-		CCNA_00115	0.43	+0.1
124,383	+		CCNA_00115	0.43	-0.7
124,406	+		CCNA_00115	0.44	-2.1
124,421	-		CCNA_00115	0.45	+0.5
124,425	+		CCNA_00115	0.45	+0.5
124,467	+		CCNA_00115	0.46	-0.7
124,523	+		CCNA_00115	0.48	+2.2
124,544	-		CCNA_00115	0.48	-0.7
124,567	+		CCNA_00115	0.49	+1.6
124,567	+		CCNA_00115	0.49	+1.4
124,585	-		CCNA_00115	0.49	+0.5
124,586	+		CCNA_00115	0.49	-3.7
124,599	-		CCNA_00115	0.50	+0.1
124,599	-		CCNA_00115	0.50	+0.4
124,600	+		CCNA_00115	0.50	-0.8
124,600	+		CCNA_00115	0.50	-1.2
124,609	-		CCNA_00115	0.50	-0.0
124,670	-		CCNA_00115	0.52	-0.3
124,682	+		CCNA_00115	0.52	-2.7
124,694	-		CCNA_00115	0.53	-0.9
124,709	+		CCNA_00115	0.53	-0.6
124,710	-		CCNA_00115	0.53	+1.4
124,732	+		CCNA_00115	0.54	-0.1
124,745	-		CCNA_00115	0.54	-3.4
124,756	-		CCNA_00115	0.55	-0.3
124,767	-		CCNA_00115	0.55	+0.0
124,787	+		CCNA_00115	0.55	-1.1
124,790	-		CCNA_00115	0.56	-2.0
124,791	+		CCNA_00115	0.56	+2.1
124,792	+		CCNA_00115	0.56	-0.8
124,799	-		CCNA_00115	0.56	-2.9
124,799	-		CCNA_00115	0.56	-0.2
124,799	-		CCNA_00115	0.56	-0.7
124,815	+		CCNA_00115	0.56	-2.4
124,826	+		CCNA_00115	0.57	-1.5
124,827	+		CCNA_00115	0.57	-0.6
124,832	+		CCNA_00115	0.57	-1.3
124,859	+		CCNA_00115	0.58	-0.3
124,861	+		CCNA_00115	0.58	-2.5
124,861	-		CCNA_00115	0.58	+1.6
124,917	-		CCNA_00115	0.59	+0.3
124,917	-		CCNA_00115	0.59	-2.1
124,917	-		CCNA_00115	0.59	-1.7
124,917	-		CCNA_00115	0.59	-0.0
124,917	-		CCNA_00115	0.59	-1.8
124,918	+		CCNA_00115	0.59	-1.1
124,936	-		CCNA_00115	0.60	-1.1
124,979	+		CCNA_00115	0.61	+0.4
124,982	-		CCNA_00115	0.61	-0.3
124,987	-		CCNA_00115	0.62	+0.4
124,987	-		CCNA_00115	0.62	-0.6
124,987	-		CCNA_00115	0.62	-0.7
125,087	-		CCNA_00115	0.65	-1.3
125,145	+		CCNA_00115	0.66	+0.7
125,145	+		CCNA_00115	0.66	+0.4
125,145	+		CCNA_00115	0.66	-2.1
125,153	-		CCNA_00115	0.66	-1.8
125,153	-		CCNA_00115	0.66	-0.1
125,153	-		CCNA_00115	0.66	-1.9
125,199	+		CCNA_00115	0.68	-0.2
125,204	+		CCNA_00115	0.68	+1.7
125,212	-		CCNA_00115	0.68	-0.3
125,229	+		CCNA_00115	0.69	-1.8
125,232	-		CCNA_00115	0.69	-1.7
125,234	+		CCNA_00115	0.69	-3.4
125,300	-		CCNA_00115	0.71	-1.3
125,335	-		CCNA_00115	0.72	-0.8
125,336	+		CCNA_00115	0.72	-1.1
125,370	-		CCNA_00115	0.73	-1.6
125,377	+		CCNA_00115	0.73	+1.1
125,385	-		CCNA_00115	0.73	-0.5
125,385	-		CCNA_00115	0.73	+1.4
125,397	-		CCNA_00115	0.74	+0.4
125,407	+		CCNA_00115	0.74	-1.8
125,475	+		CCNA_00115	0.76	+0.0
125,535	-		CCNA_00115	0.78	-2.0
125,541	-		CCNA_00115	0.78	+0.7
125,556	+		CCNA_00115	0.79	+1.1
125,556	+		CCNA_00115	0.79	+1.4
125,557	-		CCNA_00115	0.79	+1.4
125,594	+		CCNA_00115	0.80	-0.8
125,594	+		CCNA_00115	0.80	-1.5
125,594	+		CCNA_00115	0.80	-1.2
125,600	-		CCNA_00115	0.80	+1.5
125,634	+		CCNA_00115	0.81	-1.5
125,653	+		CCNA_00115	0.82	-0.2
125,653	+		CCNA_00115	0.82	-1.3
125,653	+		CCNA_00115	0.82	-1.9
125,660	+		CCNA_00115	0.82	-2.1
125,661	-		CCNA_00115	0.82	+0.4
125,661	-		CCNA_00115	0.82	-1.7
125,661	-		CCNA_00115	0.82	-1.3
125,672	-		CCNA_00115	0.82	+0.2
125,678	-		CCNA_00115	0.82	+1.0
125,678	-		CCNA_00115	0.82	+1.0
125,688	-		CCNA_00115	0.83	-0.9
125,720	+		CCNA_00115	0.84	+1.3
125,721	-		CCNA_00115	0.84	-0.1
125,732	+		CCNA_00115	0.84	-2.7
125,742	-		CCNA_00115	0.84	-0.9
125,752	-				+0.7
125,754	+		CCNA_00115	0.85	-2.3
125,755	+		CCNA_00115	0.85	-0.7
125,763	-		CCNA_00115	0.85	-0.3
125,798	+		CCNA_00115	0.86	-0.7
125,824	-		CCNA_00115	0.87	-1.5
125,858	+		CCNA_00115	0.88	-2.6
125,884	-		CCNA_00115	0.88	-2.0
125,912	+		CCNA_00115	0.89	-0.6
125,918	+		CCNA_00115	0.89	-2.1
125,920	-		CCNA_00115	0.90	-1.6
125,926	-		CCNA_00115	0.90	-1.7
125,943	-				+0.9
125,963	-				+1.4
125,980	-				+0.5
125,989	+				+0.7
125,989	+				-0.4
125,989	+				-1.0
125,997	-				+0.7
126,010	+				+1.2
126,010	+				-1.0
126,018	-				-0.8
126,018	-				-0.3
126,023	-				+1.1
126,059	+				-0.1
126,107	+				+1.3
126,136	+				+0.5
126,139	+				-0.9
126,147	+				-1.3
126,161	-				-0.6
126,199	-				-3.2
126,217	+				-0.1
126,217	+				+1.1
126,217	+				+1.2
126,218	+				-0.6
126,225	-				-2.5
126,225	-				-0.9
126,265	-				+0.4
126,267	+				+0.4
126,275	-				-0.7
126,275	-				-2.3
126,305	+				-1.9
126,319	-				+2.0
126,343	+				-0.9
126,345	-				-2.5
126,359	-				+0.2
126,370	-				+0.4
126,398	-				+0.8
126,403	-				+0.4
126,421	+				-1.7