Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17240 and BWI76_RS17245 are separated by 747 nucleotides BWI76_RS17245 and BWI76_RS17250 are separated by 478 nucleotides
BWI76_RS17240: BWI76_RS17240 - oligopeptide ABC transporter substrate-binding protein OppA, at 3,570,671 to 3,572,302
_RS17240
BWI76_RS17245: BWI76_RS17245 - hypothetical protein, at 3,573,050 to 3,573,697
_RS17245
BWI76_RS17250: BWI76_RS17250 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase, at 3,574,176 to 3,576,851
_RS17250
Position (kb)
3573
3574 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3572.200 kb on + strand at 3572.376 kb on + strand at 3572.383 kb on + strand at 3572.384 kb on - strand at 3572.384 kb on - strand at 3572.384 kb on - strand at 3572.384 kb on - strand at 3572.384 kb on - strand at 3572.391 kb on - strand at 3572.402 kb on - strand at 3572.648 kb on - strand at 3572.699 kb on + strand at 3572.852 kb on - strand at 3573.076 kb on + strand at 3573.124 kb on + strand, within BWI76_RS17245 at 3573.187 kb on - strand, within BWI76_RS17245 at 3573.261 kb on + strand, within BWI76_RS17245 at 3573.281 kb on + strand, within BWI76_RS17245 at 3573.404 kb on - strand, within BWI76_RS17245 at 3573.478 kb on + strand, within BWI76_RS17245 at 3573.496 kb on - strand, within BWI76_RS17245 at 3573.526 kb on + strand, within BWI76_RS17245 at 3573.526 kb on + strand, within BWI76_RS17245 at 3573.526 kb on + strand, within BWI76_RS17245 at 3573.534 kb on - strand, within BWI76_RS17245 at 3573.534 kb on - strand, within BWI76_RS17245 at 3573.545 kb on - strand, within BWI76_RS17245 at 3573.546 kb on - strand, within BWI76_RS17245 at 3573.582 kb on + strand, within BWI76_RS17245 at 3573.583 kb on + strand, within BWI76_RS17245 at 3573.613 kb on + strand, within BWI76_RS17245 at 3573.621 kb on - strand, within BWI76_RS17245 at 3573.627 kb on + strand, within BWI76_RS17245 at 3573.627 kb on + strand, within BWI76_RS17245 at 3573.635 kb on - strand at 3573.635 kb on - strand at 3573.635 kb on - strand at 3573.699 kb on - strand at 3573.806 kb on + strand at 3573.831 kb on - strand at 3573.874 kb on - strand at 3573.886 kb on - strand at 3573.914 kb on + strand at 3573.921 kb on + strand at 3573.977 kb on - strand at 3573.987 kb on - strand at 3573.992 kb on - strand at 3574.009 kb on - strand at 3574.009 kb on - strand at 3574.009 kb on - strand at 3574.109 kb on - strand at 3574.179 kb on - strand at 3574.209 kb on + strand at 3574.217 kb on - strand at 3574.217 kb on - strand at 3574.338 kb on + strand at 3574.513 kb on + strand, within BWI76_RS17250
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 3,572,200 + +0.1 3,572,376 + -2.2 3,572,383 + -0.8 3,572,384 - -0.3 3,572,384 - +0.0 3,572,384 - -0.1 3,572,384 - +0.2 3,572,384 - -1.0 3,572,391 - +1.0 3,572,402 - -1.2 3,572,648 - -2.0 3,572,699 + +0.1 3,572,852 - -3.0 3,573,076 + -0.3 3,573,124 + BWI76_RS17245 0.11 -1.3 3,573,187 - BWI76_RS17245 0.21 -0.1 3,573,261 + BWI76_RS17245 0.33 +0.1 3,573,281 + BWI76_RS17245 0.36 -0.2 3,573,404 - BWI76_RS17245 0.55 +0.7 3,573,478 + BWI76_RS17245 0.66 -0.4 3,573,496 - BWI76_RS17245 0.69 -0.2 3,573,526 + BWI76_RS17245 0.73 -0.5 3,573,526 + BWI76_RS17245 0.73 -0.8 3,573,526 + BWI76_RS17245 0.73 +0.9 3,573,534 - BWI76_RS17245 0.75 +0.7 3,573,534 - BWI76_RS17245 0.75 +0.8 3,573,545 - BWI76_RS17245 0.76 +0.1 3,573,546 - BWI76_RS17245 0.77 -0.7 3,573,582 + BWI76_RS17245 0.82 -2.8 3,573,583 + BWI76_RS17245 0.82 -1.5 3,573,613 + BWI76_RS17245 0.87 -0.1 3,573,621 - BWI76_RS17245 0.88 -0.1 3,573,627 + BWI76_RS17245 0.89 +0.7 3,573,627 + BWI76_RS17245 0.89 -0.2 3,573,635 - +0.1 3,573,635 - +1.1 3,573,635 - +0.2 3,573,699 - -0.0 3,573,806 + +0.4 3,573,831 - -1.9 3,573,874 - +0.0 3,573,886 - +0.8 3,573,914 + -0.9 3,573,921 + +0.7 3,573,977 - -0.8 3,573,987 - -0.5 3,573,992 - +0.1 3,574,009 - -0.3 3,574,009 - -2.2 3,574,009 - +0.5 3,574,109 - +2.9 3,574,179 - +0.3 3,574,209 + +0.7 3,574,217 - -0.3 3,574,217 - -1.7 3,574,338 + +0.5 3,574,513 + BWI76_RS17250 0.13 -2.6
Or see this region's nucleotide sequence